Search

Plant phenology regulates ecosystem functions at diverse scales but is impacted by micro and macro climatic variations, and climate change. In India, precise estimations of pheno-phase transition dates remain scarce at different spatial and temporal scales, necessitating comprehensive research efforts. This study aims to gather continuous intra-day ground data about vegetation and climate conditions using PhenoCam (optical RGB and IR images) along with meteorological sensors, at Dalma Wildlife Sanctuary (DWS), Jharkhand. To derive phenological metrics, different indices were computed from images captured by PhenoCam sensors and Satellite derived Normalized Difference Vegetation Index (NDVI). Since the PhenoCam covers diverse vegetation species in the frame, the analysis was performed over three specific subset Region of Interests (ROI): Bombax ceiba (Semal) tree, background cluster of vegetation and a sample tree. MODIS NDVI data revealed that most of the area is highly deciduous with major greening in the 1st half of April and senescence during 2nd half of March. The study found that Green Chromatic Coordinate Index (GCC) and Blue Chromatic Coordinate Index (BCC) results could reveal greening and senescence phases correctly. The timing of start of leaf flush (SOLF), end of leaf flush (EOLF) and end of leaf maturity (EOLM) estimated based on inflection point method from Pheno-Cam images are: for Semal tree: 5th April, 2nd May, 10th June, 2022; for background vegetation: 15th March, 28th March and 2nd May, 2022; and for sample tree: 15th March, 28th March and 25th April, 2022, respectively. The dates of SOLF differed in 2023 and it occurred twice for Semal and background vegetation: for Semal tree: 20th February and 3rd April 2023, and for background vegetation: 20th January and 8th March, 2023, respectively. The rate of leaf flush and rate of leaf maturity was not similar in different years as the rates were much higher in 2023 than in 2022. The temperature and rainfall during winter and spring played an important role in greening, senescence, and its sustenance. These findings revealed the micro-climatic effect on plant phenology in the Dalma Wildlife Sanctuary, as well as the importance of integrating PhenoCam and satellite data in accurate monitoring of phenological phases. [ABSTRACT FROM AUTHOR]

Climate change is leading to advanced snowmelt date in alpine regions. Consequently, alpine plant species and ecosystems experience substantial changes due to prolonged phenological seasons, while the responses, mechanisms and implications remain widely unclear. In this 3‐year study, we investigated the effects of advancing snowmelt on the phenology of alpine snowbed species. We related microclimatic drivers to species and ecosystem phenology using in situ monitoring and phenocams. We further used predictive modelling to determine whether early snowmelt sites could be used as sentinels for future conditions. Temperature during the snow‐free period primarily influenced flowering phenology, followed by snowmelt timing. Salix herbacea and Gnaphalium supinum showed the most opportunistic phenology, while annual Euphrasia minima struggled to complete its phenology in short growing seasons. Phenological responses varied more between years than sites, indicating potential local long‐term adaptations and suggesting these species' potential to track future earlier melting dates. Phenocams captured ecosystem‐level phenology (start, peak and end of phenological season) but failed to explain species‐level variance. Our findings highlight species‐specific responses to advancing snowmelt, with snowbed species responding highly opportunistically to changes in snowmelt timings while following species‐specific developmental programs. While species from surrounding grasslands may benefit from extended growing seasons, snowbed species may become outcompeted due to internal‐clock‐driven, non‐opportunistic senescence, despite displaying a high level of phenological plasticity. [ABSTRACT FROM AUTHOR]

Plant phenology is an important indicator of the impact of climate change on ecosystems. We have continuously monitored vegetation phenology using near-surface remote sensing, i.e., the PhenoCam in a gully region of the Loess Plateau of China from March 2020 to November 2022. In each image, three regions of interest (ROIs) were selected to represent different types of vegetation (scrub, arbor, and grassland), and five vegetation indexes were calculated within each ROI. The results showed that the green chromatic coordinate (GCC), excess green index (ExG), and vegetation contrast index (VCI) all well-captured seasonal changes in vegetation greenness. The PhenoCam captured seasonal trajectories of different vegetation that reflect differences in vegetation growth. Such differences may be influenced by external abiotic environmental factors. We analyzed the nonlinear response of the GCC series to environmental variables with the generalized additive model (GAM). Our results suggested that soil temperature was an important driver affecting plant phenology in the Loess gully region, especially the scrub showed a significant nonlinear response to soil temperature change. Since in situ phenology monitoring experiments of the small-scale on the Loess Plateau are still relatively rare, our work provides a reference for further understanding of vegetation phenological variations and ecosystem functions on the Loess Plateau. [ABSTRACT FROM AUTHOR]

Leaf coloring and fall mark the end of the growing season (EOS), playing essential roles in nutrient cycling, resource allocation, ecological interactions, and as climate change indicators. However, understanding future changes in autumn phenology is challenging due to the multitude of likely environmental cues and substantial variations in timing caused by different derivation methods. Yet, it remains unclear whether these two factors are independent or if methodological uncertainties influence the environmental cues determined. We derived start of growing season (SOS) and EOS at a mixed beech forest in Central Germany for the period 2000–2020 based on four different derivation methods using a unique long‐term data set of in‐situ data, canopy imagery, eddy covariance measurements, and satellite remote sensing data and determined their influence on a predictor analysis of leaf senescence. Both SOS and EOS exhibited substantial ranges in mean onset dates (39.5 and 28.6 days, respectively) across the different methods, although inter‐annual variations and advancing SOS trends were similar across methods. Depending on the data, EOS trends were advanced or delayed, but inter‐annual patterns correlated well (mean r =.46). Overall, warm, dry, and less photosynthetically productive growing seasons were more likely to be associated with a delayed EOS, while colder, wetter, and more photosynthetically productive vegetation periods resulted in an earlier EOS. In addition, contrary to recent results, no clear influence of pre‐solstice vegetation activity on the timing of senescence was detected. However, most notable were the large differences in sign and strength of potential drivers both in the univariate and multivariate analyses when comparing derivation methodologies. The results suggest that an ensemble analysis of all available phenological data sources and derivation methods is needed for general statements on autumn phenology and its influencing variables and correct implementation of the senescence process in ecosystem models. [ABSTRACT FROM AUTHOR]

Savannas are water‐limited ecosystems characterized by two dominant plant types: trees and an understory primarily made up grass. Different phenology and root structures of these plant types complicate how savanna primary productivity responds to changes in water availability. We tested the hypothesis that productivity in savannas is controlled by the temporal and vertical distribution of soil water content (SWC) and differences in growing season length of understory and tree plant functional types. To quantify the relationship between tree, understory, and savanna‐wide phenology and productivity, we used PhenoCam and satellite observations surrounding an eddy covariance tower at a semiarid savanna site in Arizona, USA. We distinguished between SWC across two different depth intervals (shallow, <0–30 cm and deep, >30–100 cm). We found that tree greenness increased with SWC at both depths, while understory greenness was only sensitive to the shallower SWC measurements. Onset of ecosystem dormancy, estimated from satellite observations close to the eddy covariance tower, explained more variability in annual gross primary productivity (GPP) than in other phenometrics. Higher SWC led to an extended growing season, caused by delayed dormancy in trees, but the understory showed no evidence of delayed dormancy in wetter periods. We infer that the timing of ecosystem scale dormancy, driven by trees, is important in understanding changes in a savanna's GPP. These findings highlight the important effects of rainfall during the winter. These findings suggest that savanna GPP is conditional on different responses to moisture availability in each of the dominant vegetation components. [ABSTRACT FROM AUTHOR]

Compost amendment to rangelands is a proposed nature‐based climate solution to increase plant productivity and soil carbon sequestration. However, it has not been evaluated using quasicontinuous ecosystem‐scale measurements. Here, we present the first study to utilize eddy covariance and footprint partitioning to monitor carbon exchange in a grassland with and without compost amendment, monitoring for 1 year before and 1 year after treatment. Compost amendment to an annual California grassland was found to enhance net ecosystem removal of carbon. Our study confirmed that compost‐amended grasslands, similar to nonamended grasslands, are net carbon sources to the atmosphere; however, the amendment appears to be slowing down the rate at which these ecosystems lose carbon by 0.71 Mg C ha−1 per growing season. Digital repeated imagery of the canopy revealed that compost‐amended grasslands experienced an earlier green‐up, resulting in an overall longer growing season by >60 days. Notably, we did not detect significantly higher amounts of soil carbon in compost‐amended soils. High variability in soil carbon demands greater sampling replication in future studies. A longer growing season and higher productivity are hypothesized to be a result of greater availability of macronutrients and micronutrients in the top layer of soil (specifically nitrogen, phosphorus, and zinc). Plain Language Summary: Previous research in California rangelands has shown that spreading a single thin layer of compost on grasslands can improve plant growth and therefore help to store more carbon in the soil. However, this previous research was constrained to small research plots. This is the first study that continuously monitored how compost affects the flow of carbon into and out of the grassland across multiple acres using a technique called eddy covariance. Our study confirmed that grasslands that receive compost have overall higher productivity or photosynthesis compared to control grasslands. Soil measurements found significantly elevated nutrients in the top layer of soil, specifically nitrogen, phosphorus, and zinc. Further, this was the first study to continuously take digital pictures to understand how compost affects the life cycles of grassland ecosystems. Examining these images revealed that the compost extended the growing season of the grasslands by >60 days. We hypothesize that the compost added essential nutrients to the soil that allowed the grasses to have a longer growing season and have higher productivity, confirming earlier studies that compost amendment to grasslands may be a viable approach for mitigating climate change. Key Points: A compost amendment to a grazed CA grassland enhanced gross primary productivity, due to an earlier green‐up and longer growing seasonSoil nitrogen, phosphorus, and zinc were significantly elevated in surface soils following compost amendmentChanges in phenology highlight the importance of scale‐emergent processes associated with nature‐based climate solutions [ABSTRACT FROM AUTHOR]

Time‐lapse cameras have been widely used as a tool to monitor the timing of seasonal vegetation growth. These simple, relatively inexpensive systems can provide high‐frequency observations of leaf development and demography which are critical data sets needed to characterize plant phenology from species to landscapes. This is important for understanding how plants are responding to global changes, as well as for validating satellite‐derived phenology products.However, in remote regions including the high‐latitude Arctic, deploying time‐lapse cameras could be challenging. The remoteness and lack of widespread power and telecommunications infrastructure limit options for the installation, maintenance and retrieval of data and equipment, and make it difficult for cameras to survive in extreme weather (e.g. long cold winters). To improve our understanding of Arctic phenology, new technologies are required to address these challenges.Here, we present a novel, low‐power, compact, lightweight time‐lapse camera system, called power‐interval camera automation module (PiCAM). The PiCAM was designed with explicit consideration to simplify deployment (i.e. without a need for external power supplies) of camera systems and to address the challenges of camera survival in harsh Arctic environments. In this paper, we describe the design, setup and technical details of the PiCAM and provide a roadmap for how to build and operate these systems. As proof of concept, we deployed 26 PiCAMs at three low‐Arctic tundra sites on the Seward Peninsula, Alaska in early August 2021 for characterizing Arctic plant phenology.Of the 26 PiCAMs, 70% remained active at the point of our revisit in late July 2022 despite the extreme winter temperatures they experienced (< −30°C, heavy snow cover). We extracted key plant phenology metrics from the PiCAMs and captured strong differences across key Arctic plant species. We showed that the PiCAM has the potential to be widely used for monitoring plant phenology across the broader Arctic region, addressing the need for ground‐based understanding of Arctic phenological diversity to develop knowledge of plant response to climate change and to validate remote sensing products. [ABSTRACT FROM AUTHOR]

Wetlands are important CO2 sinks and methane sources, and their seasonality and phenological cycle play an essential role in understanding the carbon budget. However, given the spatial heterogeneity of wetland landscapes and the coarser spatial resolution of satellites, the phenological retrievals of wetlands are challenging. Here we examined the phenology of wetlands from 30 m harmonized Landsat/Sentinel-2 (LandSent30) and 500 m MODIS satellite observations using the ground phenology network PhenoCam as a benchmark. This study used all 11 available wetland PhenoCam sites (about 30 site years), covering diverse wetland types from different climate zones. We found that the LandSent30-based phenology results were in overall higher consistency with the PhenoCam results compared to MODIS, which could be related to the better explanation capacity of LandSent30 data in the heterogeneous landscapes of wetlands. This also means that the LandSent30 has an advantage over the 500 m MODIS regarding wetland vegetation phenological retrievals. It should be noted that the LandSent30 did not show a greatly improved performance, which could be related to the specificity and complexity of the wetlands landscape. We also illustrated the potential effects of the location and observation direction of PhenoCam cameras, the selection of Region of Interest (ROI), as well as the landscape composition of the site. Overall, this study highlights the complexity of wetland phenology from both ground and remote sensing observations at different scales, which paves the road for understanding the role of wetlands in global climate change and provides a basis for understanding the real phenological changes of wetland surfaces. [ABSTRACT FROM AUTHOR]

Deciduous broadleaf forests (DBF) are an extremely widespread vegetation type in the global ecosystem and an indicator of global environmental change; thus, they require accurate phenological monitoring. However, there is still a lack of systematic understanding of the sensitivity of phenological retrievals for DBF in terms of different spatial resolution data and proxy indices. In this study, 79 globally distributed DBF PhenoCam Network sites (total 314 site-years, 2013–2018) were used as the reference data (based on green chromaticity coordinates, GCC). Different spatial resolutions (30 m Landsat and Sentinel-2 data, and 500 m MCD43A4 data) and satellite remote sensing vegetation indices (normalized difference vegetation index, NDVI; enhanced vegetation index, EVI; and near-infrared reflectance of vegetation, NIRV) were compared to find the most suitable data and indices for DBF phenological retrievals. The results showed that: (1) for different spatial resolutions, both 30 m Landsat–Sentinel-2 data and 500 m MODIS data accurately captured (R2 > 0.8) DBF phenological metrics (i.e., the start of the growing season, SOS, and the end of the growing season, EOS), which are associated with the comparatively homogeneous landscape pattern of DBF; (2) for SOS, the NIRv index was closer to GCC than EVI and NDVI, and it showed a slight advantage over EVI and a significant advantage over NDVI. However, for EOS, NDVI performed best, outperforming EVI and NIRv; and (3) for different phenological metrics, the 30 m data showed a significant advantage for detecting SOS relative to the 500 m data, while the 500 m MCD43A4 outperformed the 30 m data for EOS. This was because of the differences between the wavebands used for GCC and for the satellite remote sensing vegetation indices calculations, as well as the different sensitivity of spatial resolution data to bare soil. This study provides a reference for preferred data and indices for broad scale accurate monitoring of DBF phenology. [ABSTRACT FROM AUTHOR]

Satellite-retrieved land surface phenology (LSP) is a first-order control on terrestrial ecosystem productivity, which is critical for monitoring the ecological environment and human and social sustainable development. However, mapping large-scale LSP at a 30 m resolution remains challenging due to the lack of dense time series images with a fine resolution and the difficulty in processing large volumes of data. In this paper, we proposed a framework to extract fine-resolution LSP across the conterminous United States using the supercomputer Tianhe-2. The proposed framework comprised two steps: (1) generation of the dense two-band enhanced vegetation index (EVI2) time series with a fine resolution via the spatiotemporal fusion of MODIS and Landsat images using ESTARFM, and (2) extraction of the long-term and fine-resolution LSP using the fused EVI2 dataset. We obtained six methods (i.e., AT, FOD, SOD, RCR, TOD and CCR) of fine-resolution LSP with the proposed framework, and evaluated its performance at both the site and regional scales. Comparing with PhenoCam-observed phenology, the start of season (SOS) derived from the fusion data using six methods of AT, FOD, SOD, RCR, TOD and CCR obtained r values of 0.43, 0.44, 0.41, 0.29, 0.46 and 0.52, respectively, and RMSE values of 30.9, 28.9, 32.2, 37.9, 37.8 and 33.2, respectively. The satellite-retrieved end of season (EOS) using six methods of AT, FOD, SOD, RCR, TOD and CCR obtained r values of 0.68, 0.58, 0.68, 0.73, 0.65 and 0.56, respectively, and RMSE values of 51.1, 53.6, 50.5, 44.9, 51.8 and 54.6, respectively. Comparing with the MCD12Q2 phenology, the satellite-retrieved 30 m fine-resolution LSP of the proposed framework can obtain more information on the land surface, such as rivers, ridges and valleys, which is valuable for phenology-related studies. The proposed framework can yield robust fine-resolution LSP at a large-scale, and the results have great potential for application into studies addressing problems in the ecological environmental at a large scale. [ABSTRACT FROM AUTHOR]

In deciduous forests, spring leaf development and fall leaf senescence regulate the timing and duration of photosynthesis and transpiration. Being able to model these dates is therefore critical to accurately representing ecosystem processes in biogeochemical models. Despite this, there has been relatively little effort to improve internal phenology predictions in widely used biogeochemical models. Here, we optimized the phenology algorithms in a regionally developed biogeochemical model (PnET-CN) using phenology data from eight mid-latitude PhenoCam sites in eastern North America. We then performed a sensitivity analysis to determine how the optimization affected future predictions of carbon, water, and nitrogen cycling at Bartlett Experimental Forest, New Hampshire. Compared to the original PnET-CN phenology models, our new spring and fall models resulted in shorter season lengths and more abrupt transitions that were more representative of observations. The new phenology models affected daily estimates and interannual variability of modeled carbon exchange, but they did not have a large influence on the magnitude or long-term trends of annual totals. Under future climate projections, our new phenology models predict larger shifts in season length in the fall (1.1–3.2 days decade−1) compared to the spring (0.9–1.5 days decade−1). However, for every day the season was longer, spring had twice the effect on annual carbon and water exchange totals compared to the fall. These findings highlight the importance of accurately modeling season length for future projections of carbon and water cycling. [ABSTRACT FROM AUTHOR]

Dryland ecosystems are critical in regulating the interannual variability of the global terrestrial carbon cycle. The responses of such ecosystems to weather and environmental conditions remain important factors that limit the accurate projections of carbon balance under future climate change. Here, we investigated how shifts in vegetation phenology resulting from changes in weather and environmental conditions influenced ecosystem carbon cycling in one semiarid ecosystem in the Hanford area of central Washington, United States. We examined two years of measurements of the phenology camera, eddy covariance, and soil chamber from an upland semiarid sagebrush ecosystem. Both years had contrasting diel and seasonal patterns of CO 2 fluxes, primarily driven by differences in vegetation phenology. The net ecosystem exchange of CO 2 (NEE) and evapotranspiration (ET) in 2019 were enlarged by shifted vegetation phenology, as a cold and snow-covered winter and warm and dry winter in 2020 resulted in constrained magnitudes of NEE and ET during the summer months. The annual gross primary productivity (GPP) was much higher in 2019 than in 2020 (−211 vs. −112 gC m − 2 ), whereas ecosystem respiration was comparable in these two years (164 vs. 144 gC m − 2 ). Thus, the annual NEE in 2019 was negative (−47 gC m − 2 ) with the sagebrush ecosystem functioning as a carbon sink, while the positive annual NEE in 2020 indicated that the sagebrush ecosystem functioned as a carbon source. Our results demonstrate that winter snowpack can be a critical driver of annual carbon uptake in semiarid sagebrush ecosystems. [ABSTRACT FROM AUTHOR]

Stormwater management is of great importance in large shrinking cities with aging and outdated infrastructure. Maintenance of vegetated areas, particularly referred to as green infrastructure, is often aimed at mitigating flooding and the urban heat island effect by stormwater storage and evaporative cooling, respectively. This approach has been applied in large cities as a cost-effective and eco-friendly solution. However, the ecohydrological processes and how the ecohydrology influences the function of green infrastructure and its potential to provide those ecosystem services are not well understood. In this study, continuous field measurements including air temperature, stomatal conductance, and phenocam images were taken in a 308 m2 bioswale retrofitted into a 4063 m2 parking lot on the Wayne State University campus in Detroit, Michigan over a two-year period. Our results suggest that plant characteristics such as water use efficiency impact the ecohydrological processes within bioswales and that retrofitted bioswales will need to be adapted over time to meet environmental demands to allow for full and sustained success. Therefore, projected shifts in precipitation regime change are expected to affect the performance of green infrastructure, and each bioswale needs to be developed and engineered to be able to adapt to changing rainfall patterns. [ABSTRACT FROM AUTHOR]

Detecting crop phenology with satellite time series is important to characterize agroecosystem energy-water-carbon fluxes, manage farming practices, and predict crop yields. Despite the advances in satellite-based crop phenological retrievals, interpreting those retrieval characteristics in the context of on-the-ground crop phenological events remains a long-standing hurdle. Over the recent years, the emergence of near-surface phenology cameras (e.g., PhenoCams), along with the satellite imagery of both high spatial and temporal resolutions (e.g., PlanetScope imagery), has largely facilitated direct comparisons of retrieved characteristics to visually observed crop stages for phenological interpretation and validation. The goal of this study is to systematically assess near-surface PhenoCams and high-resolution PlanetScope time series in reconciling sensor- and ground-based crop phenological characterizations. With two critical crop stages (i.e., crop emergence and maturity stages) as an example, we retrieved diverse phenological characteristics from both PhenoCam and PlanetScope imagery for a range of agricultural sites across the United States. The results showed that the curvature-based Greenup and Gu-based Upturn estimates showed good congruence with the visually observed crop emergence stage (RMSE about 1 week, bias about 0–9 days, and R square about 0.65–0.75). The threshold- and derivative-based End of greenness falling Season (i.e., EOS) estimates reconciled well with visual crop maturity observations (RMSE about 5–10 days, bias about 0–8 days, and R square about 0.6–0.75). The concordance among PlanetScope, PhenoCam, and visual phenology demonstrated the potential to interpret the fine-scale sensor-derived phenological characteristics in the context of physiologically well-characterized crop phenological events, which paved the way to develop formal protocols for bridging ground-satellite phenological characterization. [ABSTRACT FROM AUTHOR]

In recent decades, the use of satellite sensors, near‐surface cameras, and other remote methods for monitoring vegetation phenology at landscape and higher scales has become increasingly common. These technologies provide a means to determine the timing of phenophases and growing season length at different spatial resolutions; coverage that is not attainable by human observers. However, in situ ground observations are required to validate remotely derived phenometrics. Despite increased knowledge and expertise there still remains the persistent challenge of reconciling ground observations at the individual plant level with remotely sensed (RS) phenometrics at landscape or larger scales. We compared the timing of in situ phenophase estimates (spring and autumn) with a range of corresponding remote sensing (moderate resolution imaging spectroradiometer [MODIS], visible infrared imaging radiometer suite [VIIRS], PhenoCam) phenometrics across five terrestrial sites in the United States' NEON (Harvard Forest [MA] [HARV], Onaqui [UT] [ONAQ], Abby Road [WA] [ABBY], Disney Wilderness Preserve [FL] [DSNY], and Ordway‐Swisher Biological Station [FL] [OSBS]) focusing on the 3‐year period from 2017 to 2019. Our main objective was to explore potential reasons for the observed discrepancies between in situ and RS phenometrics and to determine which technologies were better able to capture ground observations. Statistically significant relationships were strongest (p < 0.001) for spring phenophases, while the only RS phenometrics significantly correlated with in situ estimates of autumn phenophases were leaf fall (p < 0.01) and leaves (p < 0.000). In particular, root mean square error (RMSE) (mean bias error [MBE]) for MODIS‐Enhanced Vegetation Index‐2 band (EVI2), VIIRS‐EVI2, and PhenoCam‐green chromatic coordinate (GCC) derived early spring transition dates indicated overall differences of 21.7 days (−4.6 days), 28.4 days (−1.2 days), and 24.1 days (11.9 days) from in situ estimates of early leaf‐out dates. In autumn, RMSE/MBE was smallest (10.9 days/−2.2 days) between phenesse estimates (95th percentile date) of the latest date of in situ leaf fall and VIIRS derived end of senescence, compared to the equivalent phenometric derived from MODIS (13.5 days/7.7 days) and PhenoCam (GCC greenness‐falling) (13.8 days/−5.1 days). Overall, discrepancies between in situ and RS phenology related to scale, species availability, and the short duration of the time series (3 years). However, as the NEON project progresses these challenges are expected to be reduced as more data become available. [ABSTRACT FROM AUTHOR]

Summary: Spatiotemporal patterns of Spartina alterniflora belowground biomass (BGB) are important for evaluating salt marsh resiliency. To solve this, we created the BERM (Belowground Ecosystem Resiliency Model), which estimates monthly BGB (30‐m spatial resolution) from freely available data such as Landsat‐8 and Daymet climate summaries.Our modeling framework relied on extreme gradient boosting, and used field observations from four Georgia salt marshes as ground‐truth data. Model predictors included estimated tidal inundation, elevation, leaf area index, foliar nitrogen, chlorophyll, surface temperature, phenology, and climate data. The final model included 33 variables, and the most important variables were elevation, vapor pressure from the previous four months, Normalized Difference Vegetation Index (NDVI) from the previous five months, and inundation.Root mean squared error for BGB from testing data was 313 g m−2 (11% of the field data range), explained variance (R2) was 0.62–0.77. Testing data results were unbiased across BGB values and were positively correlated with ground‐truth data across all sites and years (r = 0.56–0.82 and 0.45–0.95, respectively).BERM can estimate BGB within Spartina alterniflora salt marshes where environmental parameters are within the training data range, and can be readily extended through a reproducible workflow. This provides a powerful approach for evaluating spatiotemporal BGB and associated ecosystem function. [ABSTRACT FROM AUTHOR]

Summary: Evergreen conifer forests are the most prevalent land cover type in North America. Seasonal changes in the color of evergreen forest canopies have been documented with near‐surface remote sensing, but the physiological mechanisms underlying these changes, and the implications for photosynthetic uptake, have not been fully elucidated.Here, we integrate on‐the‐ground phenological observations, leaf‐level physiological measurements, near surface hyperspectral remote sensing and digital camera imagery, tower‐based CO2 flux measurements, and a predictive model to simulate seasonal canopy color dynamics.We show that seasonal changes in canopy color occur independently of new leaf production, but track changes in chlorophyll fluorescence, the photochemical reflectance index, and leaf pigmentation. We demonstrate that at winter‐dormant sites, seasonal changes in canopy color can be used to predict the onset of canopy‐level photosynthesis in spring, and its cessation in autumn. Finally, we parameterize a simple temperature‐based model to predict the seasonal cycle of canopy greenness, and we show that the model successfully simulates interannual variation in the timing of changes in canopy color.These results provide mechanistic insight into the factors driving seasonal changes in evergreen canopy color and provide opportunities to monitor and model seasonal variation in photosynthetic activity using color‐based vegetation indices. [ABSTRACT FROM AUTHOR]

Phenology studies mostly focus on variation across time or landscapes. However, phenology can vary at fine spatial scales, and these differences may be as important as long-term change from climate warming. We used high-frequency "PhenoCam" data to examine phenology of Spartina alterniflora, a foundation species native to salt marshes on the US East and Gulf coasts, and a common colonizer elsewhere. We examined phenology across three microhabitats from 2013 to 2017 and used this information to create the first spring green-up model for S. alterniflora. We then compared modern spatial variation to that exhibited over a 60-year climate record. Marsh interior plants initiated spring growth 17 days earlier than channel edge plants and spent 35 days more in the green-up phenophase and 25 days less in the maturity phenophase. The start of green-up varied by 17 days among 3 years. The best spring green-up model was based on winter soil total growing degree days. Across microhabitats, spring green-up differences were caused by small elevation changes (15 cm) that drove soil temperature variation of 0.8°C. Preliminary evidence indicated that high winter belowground biomass depletion triggered early green-up. Long-term change was similar: winter soil temperatures warmed 1.7 ± 0.3°C since 1958, and green-up advanced 11 ± 6 days, whereas contemporary microhabitat differences were 17 ± 4 days. Incorporating local spatial variation into plant phenology models may provide an early warning of climate vulnerability and improve understanding of ecosystem-scale productivity. Microscale phenology variation likely exists in other systems and has been unappreciated. [ABSTRACT FROM AUTHOR]

Near-surface remote sensing (e.g., digital cameras) has played an important role in capturing plant phenological metrics at either a focal or landscape scale. Exploring the relationship of the digital image-based greenness index (e.g., Gcc, green chromatic coordinate) with that derived from satellites is critical for land surface process research. Moreover, our understanding of how well Gcc time series associate with environmental variables at field stations in North American prairies remains limited. This paper investigated the response of grass Gcc to daily environmental factors in 2018, such as soil moisture (temperature), air temperature, and solar radiation. Thereafter, using a derivative-based phenology extraction method, we evaluated the correspondence between key phenological events (mainly including start, end and length of growing season, and date with maximum greenness value) derived from Gcc, MODIS and VIIRS NDVI (EVI) for the period 2015–2018. The results showed that daily Gcc was in good agreement with ground-level environmental variables. Additionally, multivariate regression analysis identified that the grass growth in the study area was mainly affected by soil temperature and solar radiation, but not by air temperature. High frequency Gcc time series can respond immediately to precipitation events. In the same year, the phenological metrics retrieved from digital cameras and multiple satellites are similar, with spring phenology having a larger relative difference. There are distinct divergences between changing rates in the greenup and senescence stages. Gcc also shows a close relationship with growing degree days (GDD) derived from air temperature. This study evaluated the performance of a digital camera for monitoring vegetation phenological metrics and related climatic factors. This research will enable multiscale modeling of plant phenology and grassland resource management of temperate prairie ecosystems. [ABSTRACT FROM AUTHOR]

Summary: Global change is shifting the seasonality of vegetation in ecosystems around the globe. High‐frequency digital camera imagery, and vegetation indices derived from that imagery, is facilitating better tracking of phenological responses to environmental variation. This method, commonly referred to as the 'phenocam' approach, is well suited to several specific applications, including: close‐up observation of individual organisms; long‐term canopy‐level monitoring at individual sites; automated phenological monitoring in regional‐to‐continental scale observatory networks; and tracking responses to experimental treatments. Several camera networks are already well established, and some camera records are a more than a decade long. These data can be used to identify the environmental controls on phenology in different ecosystems, which will contribute to the development of improved prognostic phenology models. [ABSTRACT FROM AUTHOR]

ContentsSummaryI.IntroductionII.Evolving modes of phenological studyIII.The phenocam approachIV.Applications of the phenocam methodV.Looking forwardAcknowledgementsReferences Summary: Global change is shifting the seasonality of vegetation in ecosystems around the globe. High‐frequency digital camera imagery, and vegetation indices derived from that imagery, is facilitating better tracking of phenological responses to environmental variation. This method, commonly referred to as the 'phenocam' approach, is well suited to several specific applications, including: close‐up observation of individual organisms; long‐term canopy‐level monitoring at individual sites; automated phenological monitoring in regional‐to‐continental scale observatory networks; and tracking responses to experimental treatments. Several camera networks are already well established, and some camera records are a more than a decade long. These data can be used to identify the environmental controls on phenology in different ecosystems, which will contribute to the development of improved prognostic phenology models. [ABSTRACT FROM AUTHOR]

Rising atmospheric [CO2] and associated climate change are expected to modify primary productivity across a range of ecosystems globally. Increasing aridity is predicted to reduce grassland productivity, although rising [CO2] and associated increases in plant water use efficiency may partially offset the effect of drying on growth. Difficulties arise in predicting the direction and magnitude of future changes in ecosystem productivity, due to limited field experimentation investigating climate and CO2 interactions. We use repeat near-surface digital photography to quantify the effects of water availability and experimentally manipulated elevated [CO2] (eCO2) on understorey live foliage cover and biomass over three growing seasons in a temperate grassy woodland in south-eastern Australia. We hypothesised that (i) understorey herbaceous productivity is dependent upon soil water availability, and (ii) that eCO2 will increase productivity, with greatest stimulation occurring under conditions of low water availability. Soil volumetric water content (VWC) determined foliage cover and growth rates over the length of the growing season (August to March), with low VWC (<0.1 m³ m-3) reducing productivity. However, eCO2 did not increase herbaceous cover and biomass over the duration of the experiment, or mitigate the effects of low water availability on understorey growth rates and cover. Our findings suggest that projected increases in aridity in temperate woodlands are likely to lead to reduced understorey productivity, with little scope for eCO2 to offset these changes. [ABSTRACT FROM AUTHOR]

Near surface (i.e., camera) and satellite remote sensing metrics have become widely used indicators of plant growing seasons. While robust linkages have been established between field metrics and ecosystem exchange in many land cover types, assessment of how well remotely-derived season start and end dates depict field conditions in arid ecosystems remain unknown. We evaluated the correspondence between field measures of start (SOS; leaves unfolded and canopy greenness > 0) and end of season (EOS) and canopy greenness for two widespread species in southwestern U.S. ecosystems with those metrics estimated from near-surface cameras and MODIS NDVI for five years (2012–2016). Using Timesat software to estimate SOS and EOS from the phenocam green chromatic coordinate (GCC) greenness index resulted in good agreement with ground observations for honey mesquite but not black grama. Despite differences in the detectability of SOS and EOS for the two species, GCC was significantly correlated with field estimates of canopy greenness for both species throughout the growing season. MODIS NDVI for this arid grassland site was driven by the black grama signal although a mesquite signal was discernable in average rainfall years. Our findings suggest phenocams could help meet myriad needs in natural resource management. [ABSTRACT FROM AUTHOR]

Mountainous regions experience complex phenological behavior along climatic, vegetational and topographic gradients. In this paper, we use a MODIS time series of the Normalized Difference Vegetation Index (NDVI) to understand the causes of variations in spring and autumn timing from 2000 to 2015, for a landscape renowned for its biological diversity. By filtering for cover type, topography and disturbance history, we achieved an improved understanding of the effects of seasonal weather variation on land surface phenology (LSP). Elevational effects were greatest in spring and were more important than site moisture effects. The spring and autumn NDVI of deciduous forests were found to increase in response to antecedent warm temperatures, with evidence of possible cross-seasonal lag effects, including possible accelerated green-up after cold Januarys and early brown-down following warm springs. Areas that were disturbed by the hemlock woolly adelgid and a severe tornado showed a weaker sensitivity to cross-year temperature and precipitation variation, while low severity wildland fire had no discernable effect. Use of ancillary datasets to filter for disturbance and vegetation type improves our understanding of vegetation’s phenological responsiveness to climate dynamics across complex environmental gradients. [ABSTRACT FROM AUTHOR]

A spring phenology model that combines photoperiod with accumulated heating and chilling to predict spring leaf-out dates is optimized using PhenoCam observations and coupled into the Community Land Model ( CLM) 4.5. In head-to-head comparison (using satellite data from 2003 to 2013 for validation) for model grid cells over the Northern Hemisphere deciduous broadleaf forests (5.5 million km2), we found that the revised model substantially outperformed the standard CLM seasonal-deciduous spring phenology submodel at both coarse (0.9 × 1.25°) and fine (1 km) scales. The revised model also does a better job of representing recent (decadal) phenological trends observed globally by MODIS, as well as long-term trends (1950-2014) in the PEP725 European phenology dataset. Moreover, forward model runs suggested a stronger advancement (up to 11 days) of spring leaf-out by the end of the 21st century for the revised model. Trends toward earlier advancement are predicted for deciduous forests across the whole Northern Hemisphere boreal and temperate deciduous forest region for the revised model, whereas the standard model predicts earlier leaf-out in colder regions, but later leaf-out in warmer regions, and no trend globally. The earlier spring leaf-out predicted by the revised model resulted in enhanced gross primary production (up to 0.6 Pg C yr−1) and evapotranspiration (up to 24 mm yr−1) when results were integrated across the study region. These results suggest that the standard seasonal-deciduous submodel in CLM should be reconsidered, otherwise substantial errors in predictions of key land-atmosphere interactions and feedbacks may result. [ABSTRACT FROM AUTHOR]

The impact of a rapidly changing climate on the biosphere is an urgent area of research for mitigation policy and management. Plant phenology is a sensitive indicator of climate change and regulates the seasonality of carbon, water, and energy fluxes between the land surface and the climate system, making it an important tool for studying biosphere-atmosphere interactions. To monitor plant phenology at regional and continental scales, automated near-surface cameras are being increasingly used to supplement phenology data derived from satellite imagery and data from ground-based human observers. We used imagery from a network of phenology cameras in a citizen science project called Season Spotter to investigate whether information could be derived from these images beyond standard, color-based vegetation indices. We found that engaging citizen science volunteers resulted in useful science knowledge in three ways: first, volunteers were able to detect some, but not all, reproductive phenology events, connecting landscape-level measures with field-based measures. Second, volunteers successfully demarcated individual trees in landscape imagery, facilitating scaling of vegetation indices from organism to ecosystem. And third, volunteers' data were used to validate phenology transition dates calculated from vegetation indices and to identify potential improvements to existing algorithms to enable better biological interpretation. As a result, the use of citizen science in combination with near-surface remote sensing of phenology can be used to link ground-based phenology observations to satellite sensor data for scaling and validation. Well-designed citizen science projects targeting improved data processing and validation of remote sensing imagery hold promise for providing the data needed to address grand challenges in environmental science and Earth observation. [ABSTRACT FROM AUTHOR]

The proliferation of digital cameras co-located with eddy covariance instrumentation provides new opportunities to better understand the relationship between canopy phenology and the seasonality of canopy photosynthesis. In this paper we analyze the abilities and limitations of canopy color metrics measured by digital repeat photography to track seasonal canopy development and photosynthesis, determine phenological transition dates, and estimate intra-annual and interannual variability in canopy photosynthesis. We used 59 site-years of camera imagery and net ecosystem exchange measurements from 17 towers spanning three plant functional types (deciduous broadleaf forest, evergreen needleleaf forest, and grassland/crops) to derive color indices and estimate gross primary productivity (GPP). GPP was strongly correlated with greenness derived from camera imagery in all three plant functional types. Specifically, the beginning of the photosynthetic period in deciduous broadleaf forest and grassland/crops and the end of the photosynthetic period in grassland/crops were both correlated with changes in greenness; changes in redness were correlated with the end of the photosynthetic period in deciduous broadleaf forest. However, it was not possible to accurately identify the beginning or ending of the photosynthetic period using camera greenness in evergreen needleleaf forest. At deciduous broadleaf sites, anomalies in integrated greenness and total GPP were significantly correlated up to 60 days after the mean onset date for the start of spring. More generally, results from this work demonstrate that digital repeat photography can be used to quantify both the duration of the photosynthetically active period as well as total GPP in deciduous broadleaf forest and grassland/crops, but that new and different approaches are required before comparable results can be achieved in evergreen needleleaf forest. [ABSTRACT FROM AUTHOR]

Digital repeat photography is becoming widely used for near-surface remote sensing of vegetation. Canopy greenness, which has been used extensively for phenological applications, can be readily quantified from camera images. Important questions remain, however, as to whether the observed changes in canopy greenness are directly related to changes in leaf-level traits, changes in canopy structure, or some combination thereof. We investigated relationships between canopy greenness and various metrics of canopy structure and function, using five years (2008-2012) of automated digital imagery, ground observations of phenological transitions, leaf area index (LAI) measurements, and eddy covariance estimates of gross ecosystem photosynthesis from the Harvard Forest, a temperate deciduous forest in the northeastern United States. Additionally, we sampled canopy sunlit leaves on a weekly basis throughout the growing season of 2011. We measured physiological and morphological traits including leaf size, mass (wet/dry), nitrogen content, chlorophyll fluorescence, and spectral reflectance and characterized individual leaf color with flatbed scanner imagery. Our results show that observed spring and autumn phenological transition dates are well captured by information extracted from digital repeat photography. However, spring development of both LAI and the measured physiological and morphological traits are shown to lag behind spring increases in canopy greenness, which rises very quickly to its maximum value before leaves are even half their final size. Based on the hypothesis that changes in canopy greenness represent the aggregate effect of changes in both leaf-level properties (specifically, leaf color) and changes in canopy structure (specifically, LAI), we developed a two end-member mixing model. With just a single free parameter, the model was able to reproduce the observed seasonal trajectory of canopy greenness. This analysis shows that canopy greenness is relatively insensitive to changes in LAI at high LAI levels, which we further demonstrate by assessing the impact of an ice storm on both LAI and canopy greenness. Our study provides new insights into the mechanisms driving seasonal changes in canopy greenness retrieved from digital camera imagery. The nonlinear relationship between canopy greenness and canopy LAI has important implications both for phenological research applications and for assessing responses of vegetation to disturbances. [ABSTRACT FROM AUTHOR]

Satellite remote sensing is an important method for forest phenological studies at continental or global scales. Sentinel-1 (S1), a polar orbit satellite with a spatial resolution of 10 m, provides an opportunity to observe high-resolution forest phenology. The sensitivities of S1 C-band backscatter measurements to vegetation phenology, such as crops, meadows, and mixed forests, have been discussed, whereas their performance for different forest types has not yet been quantitatively assessed. It is necessary to evaluate accuracy before adapting S1 datasets in forest phenological studies. This study discusses the seasonal variations in S1 backscatter measurements and assesses the accuracy of S1-based forest phenological metrics in two types of typical forests: deciduous and coniferous. S1 C-band SAR dual-polarization backscatter measurements for the period 2017–2019 were used to extract forest phenology metrics using the Fourier transform (FT) and double logistic (DL) functions. Phenological metrics from the ground-based PhenoCam dataset were used for evaluation. The S1 backscatter VV-VH signal peaks for deciduous and coniferous forests occur in the winter and summer, respectively. The S1 backscatter could reasonably characterize the start of season (SOS) of deciduous forests, with R² values up to 0.8, whereas the R² values for coniferous forest SOS were less than 0.30. Moreover, the retrieved end of season (EOS) was less accurate than the SOS. The differences in accuracy of S1 backscatter phenological metrics between deciduous and coniferous forests can be explained by the differences in seasonal changes in their corresponding canopy structures. To conclude, S1 C-band backscatter has a reasonable performance when monitoring the SOS of deciduous broadleaf forests (R² = 0.8) and relatively poor performance when extracting EOS of deciduous broadleaf forests (R² = 0.25) or phenology of evergreen needleleaf forests (R² = 0.2). [ABSTRACT FROM AUTHOR]

Near-surface cameras, such as those in the PhenoCam network, are a common source of ground truth data in modelling and remote sensing studies. Despite having locations across numerous agricultural sites, few studies have used near-surface cameras to track the unique phenology of croplands. Due to management activities, crops do not have a natural vegetation cycle which many phenological extraction methods are based on. For example, a field may experience abrupt changes due to harvesting and tillage throughout the year. A single camera can also record several different plants due to crop rotations, fallow fields, and cover crops. Current methods to estimate phenology metrics from image time series compress all image information into a relative greenness metric, which discards a large amount of contextual information. This can include the type of crop present, whether snow or water is present on the field, the crop phenology, or whether a field lacking green plants consists of bare soil, fully senesced plants, or plant residue. Here, we developed a modelling workflow to create a daily time series of crop type and phenology, while also accounting for other factors such as obstructed images and snow covered fields. We used a mainstream deep learning image classification model, VGG16. Deep learning classification models do not have a temporal component, so to account for temporal correlation among images, our workflow incorporates a hidden Markov model in the post-processing. The initial image classification model had out of sample F1 scores of 0.83–0.85, which improved to 0.86–0.91 after all post-processing steps. The resulting time series show the progression of crops from emergence to harvest, and can serve as a daily, local-scale dataset of field states and phenological stages for agricultural research. [ABSTRACT FROM AUTHOR]

Intercomparison of satellite-derived vegetation phenology is scarce in remote locations because of the limited coverage area and low temporal resolution of field observations. By their reliable near-ground observations and high-frequency data collection, PhenoCams can be a robust tool for intercomparison of land surface phenology derived from satellites. This study aims to investigate the transition dates of black spruce (Picea mariana (Mill.) B.S.P.) phenology by comparing fortnightly the MODIS normalized difference vegetation index (NDVI) and the enhanced vegetation index (EVI) extracted using the Google Earth Engine (GEE) platform with the daily PhenoCam-based green chromatic coordinate (GCC) index. Data were collected from 2016 to 2019 by PhenoCams installed in six mature stands along a latitudinal gradient of the boreal forests of Quebec, Canada. All time series were fitted by double-logistic functions, and the estimated parameters were compared between NDVI, EVI, and GCC. The onset of GCC occurred in the second week of May, whereas the ending of GCC occurred in the last week of September. We demonstrated that GCC was more correlated with EVI (R2 from 0.66 to 0.85) than NDVI (R2 from 0.52 to 0.68). In addition, the onset and ending of phenology were shown to differ by 3.5 and 5.4 days between EVI and GCC, respectively. Larger differences were detected between NDVI and GCC, 17.05 and 26.89 days for the onset and ending, respectively. EVI showed better estimations of the phenological dates than NDVI. This better performance is explained by the higher spectral sensitivity of EVI for multiple canopy leaf layers due to the presence of an additional blue band and an optimized soil factor value. Our study demonstrates that the phenological observations derived from PhenoCam are comparable with the EVI index. We conclude that EVI is more suitable than NDVI to assess phenology in evergreen species of the northern boreal region, where PhenoCam data are not available. The EVI index could be used as a reliable proxy of GCC for monitoring evergreen species phenology in areas with reduced access, or where repeated data collection from remote areas are logistically difficult due to the extreme weather. [ABSTRACT FROM AUTHOR]

Fine-resolution satellite imagery is needed for characterizing dry-season phenology in tropical forests since many tropical forests are very spatially heterogeneous due to their diverse species and environmental background. However, fine-resolution satellite imagery, such as Landsat, has a 16-day revisit cycle that makes it hard to obtain a high-quality vegetation index time series due to persistent clouds in tropical regions. To solve this challenge, this study explored the feasibility of employing a series of advanced technologies for reconstructing a high-quality Landsat time series from 2005 to 2009 for detecting dry-season phenology in tropical forests; Puerto Rico was selected as a testbed. We combined bidirectional reflectance distribution function (BRDF) correction, cloud and shadow screening, and contaminated pixel interpolation to process the raw Landsat time series and developed a thresholding method to extract 15 phenology metrics. The cloud-masked and gap-filled reconstructed images were tested with simulated clouds. In addition, the derived phenology metrics for grassland and forest in the tropical dry forest zone of Puerto Rico were evaluated with ground observations from PhenoCam data and field plots. Results show that clouds and cloud shadows are more accurately detected than the Landsat cloud quality assessment (QA) band, and that data gaps resulting from those clouds and shadows can be accurately reconstructed (R2 = 0.89). In the tropical dry forest zone, the detected phenology dates (such as greenup, browndown, and dry-season length) generally agree with the PhenoCam observations (R2 = 0.69), and Landsat-based phenology is better than MODIS-based phenology for modeling aboveground biomass and leaf area index collected in field plots (plot size is roughly equivalent to a 3 × 3 Landsat pixels). This study suggests that the Landsat time series can be used to characterize the dry-season phenology of tropical forests after careful processing, which will help to improve our understanding of vegetation–climate interactions at fine scales in tropical forests. [ABSTRACT FROM AUTHOR]

Accurate and timely land surface phenology (LSP) provides essential information for investigating the responses of terrestrial ecosystems to climate changes and quantifying carbon and surface energy cycles on the Earth. LSP has been widely investigated using daily Visible Infrared Imaging Radiometer Suite (VIIRS) or Moderate Resolution Imaging Spectroradiometer (MODIS) observations, but the resultant phenometrics are frequently influenced by surface heterogeneity and persistent cloud contamination in the time series observations. Recently, LSP has been derived from Landsat-8 and Sentinel-2 time series providing detailed spatial pattern, but the results are of high uncertainties because of poor temporal resolution. With the availability of data from Advanced Baseline Imager (ABI) onboard a new generation of geostationary satellites that observe the earth every 10–15 min, daily cloud-free time series could be obtained with high opportunities. Therefore, this study investigates the generation of synthetic high spatiotemporal resolution time series by fusing the harmonized Landsat-8 and Sentinel-2 (HLS) time series with the temporal shape of ABI data for monitoring field-scale (30 m) LSP. The algorithm is verified by detecting the timings of greenup and senescence onsets around north Wisconsin/Michigan states, United States, where cloud cover is frequent during spring rainy season. The LSP detections from HLS-ABI are compared with those from HLS or ABI alone and are further evaluated using PhenoCam observations. The result indicates that (1) ABI could provide ~3 times more high-quality observations than HLS around spring greenup onset; (2) the greenup and senescence onsets derived from ABI and HLS-ABI are spatially consistent and statistically comparable with a median difference less than 1 and 10-days, respectively; (3) greenup and senescence onsets derived from HLS data show sharp boundaries around the orbit-overlapped areas and shifts of ~13 days delay and ~15 days ahead, respectively, relative to HLS-ABI detections; and (4) HLS-ABI greenup and senescence onsets align closely to PhenoCam observations with an absolute average difference of less than 2 days and 5 days, respectively, which are much better than phenology detections from ABI or HLS alone. The result suggests that the proposed approach could be implemented the monitor of 30 m LSP over regions with persistent cloud cover. [ABSTRACT FROM AUTHOR]

Riparian and ground-water dependent ecosystems found in the Great Basin of North America are heavily utilized by livestock and wildlife throughout the year. Due to this constant pressure, grazing can be a major influence on many groundwater dependent resources. It is important for land managers to understand how intensity and timing of grazing affect the temporal availability of these commodities (i.e., biodiversity, water filtration, forage, habitat). Shifts in forage or water availability could potentially be harmful for fauna that rely on them at specific times of the year. Seven meadow communities, each consisting of three distinct vegetative communities, were grazed at three intensities to determine the relationship between grazing management and phenological timing of vegetation. The agreement of on-the-ground measurements, near-surface digital cameras (phenocams), and satellite-based indices of greenness was examined for a two-year period (2019–2020) over these grazing and vegetative community gradients. Field determined phenology, phenocam Green Chromatic Coordinate (GCC), and Landsat Normalized Difference Vegetation Index (NDVI) were all highly correlated and the relationship did not change across the treatments. Timing of growth varied in these ecosystems depending on yearly precipitation and vegetative type. Communities dominated by mesic sedges had growing seasons which stopped earlier in the year. Heavier grazing regimes, however, did not equate to significant changes in growing season. Ultimately, shifts in phenology occurred and were successfully monitored at various spatial and temporal scales. [ABSTRACT FROM AUTHOR]

Vegetation phenology plays a key role in influencing ecosystem processes and biosphere-atmosphere feedbacks. Digital cameras such as PhenoCam that monitor vegetation canopies in near real-time provide continuous images that record phenological and environmental changes. There is a need to develop methods for automated and effective detection of vegetation dynamics from PhenoCam images. Here we developed a method to predict leaf phenology of deciduous broadleaf forests from individual PhenoCam images using deep learning approaches. We tested four convolutional neural network regression (CNNR) networks on their ability to predict vegetation growing dates based on PhenoCam images at 56 sites in North America. In the one-site experiment, the predicted phenology dated to after the leaf-out events agree well with the observed data, with a coefficient of determination (R2) of nearly 0.999, a root mean square error (RMSE) of up to 3.7 days, and a mean absolute error (MAE) of up to 2.1 days. The method developed achieved lower accuracies in the all-site experiment than in the one-site experiment, and the achieved R2 was 0.843, RMSE was 25.2 days, and MAE was 9.3 days in the all-site experiment. The model accuracy increased when the deep networks used the region of interest images rather than the entire images as inputs. Compared to the existing methods that rely on time series of PhenoCam images for studying leaf phenology, we found that the deep learning method is a feasible solution to identify leaf phenology of deciduous broadleaf forests from individual PhenoCam images. [ABSTRACT FROM AUTHOR]

Snow cover is an important variable in both climatological and hydrological studies because of its relationship to environmental energy and mass flux. However, variability in snow cover can confound satellite-based efforts to monitor vegetation phenology. This research explores the utility of the PhenoCam Network cameras to estimate Fractional Snow Cover (FSC) in grassland. The goal is to operationalize FSC estimates from PhenoCams to inform and improve the satellite-based determination of phenological metrics. The study site is the Oakville Prairie Biological Field Station, located near Grand Forks, North Dakota. We developed a semi-automated process to estimate FSC from PhenoCam images through Python coding. Compared with previous research employing RGB images only, our use of the monochrome RGB + NIR (near-infrared) reduced pixel misclassification and increased accuracy. The results had an average RMSE of less than 8% FSC compared to visual estimates. Our pixel-based accuracy assessment showed that the overall accuracy of the images selected for validation was 92%. This is a promising outcome, although not every PhenoCam Network system has NIR capability. [ABSTRACT FROM AUTHOR]

The monitoring of forest phenology based on observations from near-surface sensors such as Unmanned Aerial Vehicles (UAVs), PhenoCams, and Spectral Reflectance Sensors (SRS) over satellite sensors has recently gained significant attention in the field of remote sensing and vegetation phenology. However, exploring different aspects of forest phenology based on observations from these sensors and drawing comparatives from the time series of vegetation indices (VIs) still remains a challenge. Accordingly, this research explores the potential of near-surface sensors to track the temporal dynamics of phenology, cross-compare their results against satellite observations (MODIS, Sentinel-2), and validate satellite-derived phenology. A time series of Normalized Difference Vegetation Index (NDVI), Green Chromatic Coordinate (GCC), and Normalized Difference of Green & Red (VIgreen) indices were extracted from both near-surface and satellite sensor platforms. The regression analysis between time series of NDVI data from different sensors shows the high Pearson's correlation coefficients (r > 0.75). Despite the good correlations, there was a remarkable offset and significant differences in slope during green-up and senescence periods. SRS showed the most distinctive NDVI profile and was different to other sensors. PhenoCamGCC tracked green-up of the canopy better than the other indices, with a well-defined start, end, and peak of the season, and was most closely correlated (r > 0.93) with the satellites, while SRS-based VIgreen accounted for the least correlation (r = 0.58) against Sentinel-2. Phenophase transition dates were estimated and validated against visual inspection of the PhenoCam data. The Start of Spring (SOS) and End of Spring (EOS) could be predicted with an accuracy of <3 days with GCC, while these metrics from VIgreen and NDVI resulted in a slightly higher bias of (3–10) days. The observed agreement between UAVNDVI vs. satelliteNDVI and PhenoCamGCC vs. satelliteGCC suggests that it is feasible to use PhenoCams and UAVs for satellite data validation and upscaling. Thus, a combination of these near-surface vegetation metrics is promising for a holistic understanding of vegetation phenology from canopy perspective and could serve as a good foundation for analysing the interoperability of different sensors for vegetation dynamics and change analysis. [ABSTRACT FROM AUTHOR]

The intertidal habitat of mangroves is very complex due to the dynamic roles of land and sea drivers. Knowledge of mangrove phenology can help in understanding mangrove growth cycles and their responses to climate and environmental changes. Studies of phenology based on digital repeat photography, or phenocams, have been successful in many terrestrial forests and other ecosystems, however few phenocam studies in mangrove forests showing the influence and interactions of water color and tidal water levels have been performed in sub-tropical and equatorial environments. In this study, we investigated the diurnal and seasonal patterns of an equatorial mangrove forest area at an Andaman Sea site in Phuket province, Southern Thailand, using two phenocams placed at different elevations and with different view orientations, which continuously monitored vegetation and water dynamics from July 2015 to August 2016. The aims of this study were to investigate fine-resolution, in situ mangrove forest phenology and assess the influence and interactions of water color and tidal water levels on the mangrove–water canopy signal. Diurnal and seasonal patterns of red, green, and blue chromatic coordinate (RCC, GCC, and BCC) indices were analyzed over various mangrove forest and water regions of interest (ROI). GCC signals from the water background were found to positively track diurnal water levels, while RCC signals were negatively related with tidal water levels, hence lower water levels yielded higher RCC values, reflecting brownish water colors and increased soil and mud exposure. At seasonal scales, the GCC profiles of the mangrove forest peaked in the dry season and were negatively related with the water level, however the inclusion of the water background signal dampened this relationship. We also detected a strong lunar tidal water periodicity in seasonal GCC values that was not only present in the water background, but was also detected in the mangrove–water canopy and mangrove forest phenology profiles. This suggests significant interactions between mangrove forests and their water backgrounds (color and depth), which may need to be accounted for in upscaling and coupling with satellite-based mangrove monitoring. [ABSTRACT FROM AUTHOR]

High-quality retrieval of land surface phenology (LSP) is increasingly important for understanding the effects of climate change on ecosystem function and biosphere–atmosphere interactions. We analyzed four state-of-the-art phenology methods: threshold, logistic-function, moving-average and first derivative based approaches, and retrieved LSP in the North Hemisphere for the period 1999–2017 from Copernicus Global Land Service (CGLS) SPOT-VEGETATION and PROBA-V leaf area index (LAI) 1 km V2.0 time series. We validated the LSP estimates with near-surface PhenoCam and eddy covariance FLUXNET data over 80 sites of deciduous forests. Results showed a strong correlation (R2 > 0.7) between the satellite LSP and ground-based observations from both PhenoCam and FLUXNET for the timing of the start (SoS) and R2 > 0.5 for the end of season (EoS). The threshold-based method performed the best with a root mean square error of ~9 d with PhenoCam and ~7 d with FLUXNET for the timing of SoS (30th percentile of the annual amplitude), and ~12 d and ~10 d, respectively, for the timing of EoS (40th percentile). [ABSTRACT FROM AUTHOR]

Vegetation phenology and productivity play a crucial role in surface energy balance, plant and animal distribution, and animal movement and habitat use and can be measured with remote sensing metrics including start of season (SOS), peak instantaneous rate of green-up date (PIRGd), peak of season (POS), end of season (EOS), and integrated vegetation indices. However, for most metrics, we do not yet understand the agreement of remotely sensed data products with near-surface observations. We also need summaries of changes over time, spatial distribution, variability, and consistency in remote sensing dataset metrics for vegetation timing and quality. We compare metrics from 10 leading remote sensing datasets against a network of PhenoCam near-surface cameras throughout the western United States from 2002 to 2014. Most phenology metrics representing a date (SOS, PIRGd, POS, and EOS), rather than a duration (length of spring, length of growing season), better agreed with near-surface metrics but results varied by dataset, metric, and land cover, with absolute value of mean bias ranging from 0.38 (PIRGd) to 37.92 days (EOS). Datasets had higher agreement with PhenoCam metrics in shrublands, grasslands, and deciduous forests than in evergreen forests. Phenology metrics had higher agreement than productivity metrics, aside from a few datasets in deciduous forests. Using two datasets covering the period 1982–2016 that best agreed with PhenoCam metrics, we analyzed changes over time to growing seasons. Both datasets exhibited substantial spatial heterogeneity in the direction of phenology trends. Variability of metrics increased over time in some areas, particularly in the Southwest. Approximately 60% of pixels had consistent trend direction between datasets for SOS, POS, and EOS, with the direction varying by location. In all ecoregions except Mediterranean California, EOS has become later. This study comprehensively compares remote sensing datasets across multiple growing season metrics and discusses considerations for applied users to inform their data choices. [ABSTRACT FROM AUTHOR]

Vegetation phenology plays a pivotal role in regulating several ecological processes and has profound impacts on global carbon exchange. Large-scale vegetation phenology monitoring mostly relies on Low-Earth-Orbit satellite observations with low temporal resolutions, leaving gaps in data that are important for monitoring seasonal vegetation phenology. High temporal resolution satellite observations have the potential to fill this gap by frequently collecting observations on a global scale, making it easier to study change over time. This study explored the potential of using the Earth Polychromatic Imaging Camera (EPIC) onboard the Deep Space Climate Observatory (DSCOVR) satellite, which captures images of the entire sunlit face of the Earth at a temporal resolution of once every 1–2 h, to observe vegetation phenology cycles in North America. We assessed the strengths and shortcomings of EPIC-based phenology information in comparison with the Moderate-resolution Imaging Spectroradiometer (MODIS), Enhanced Thematic Mapper (ETM+) onboard Landsat 7, and PhenoCam ground-based observations across six different plant functional types. Our results indicated that EPIC could capture and characterize seasonal changes of vegetation across different plant functional types and is particularly consistent in the estimated growing season length. Our results also provided new insights into the complementary features and benefits of the four datasets, which is valuable for improving our understanding of the complex response of vegetation to global climate variability and other disturbances and the impact of phenology changes on ecosystem productivity and global carbon exchange. [ABSTRACT FROM AUTHOR]

Premise of the Study: We investigated the spatial and temporal patterns of vegetation phenology with phenometrics derived from PhenoCam imagery. Specifically, we evaluated the Bioclimatic Law proposed by Hopkins, which relates phenological transitions to latitude, longitude, and elevation. Methods: "Green‐up" and "green‐down" dates—representing the start and end of the annual cycles of vegetation activity—were estimated from measures of canopy greenness calculated from digital repeat photography. We used data from 65 deciduous broadleaf (DB) forest sites, 18 evergreen needleleaf (EN) forest sites, and 21 grassland (GR) sites. Results: DB green‐up dates were well correlated with mean annual temperature and varied along spatial gradients consistent with the Bioclimatic Law. Interannual variation in DB phenology was most strongly associated with temperature anomalies during a relatively narrow window of time. EN phenology was not well correlated with either climatic factors or spatial gradients, but similar to DB phenology, interannual variation was most closely associated with temperature anomalies. For GR sites, mean annual precipitation explained most of the spatial variation in the duration of vegetation activity, whereas both temperature and precipitation anomalies explained interannual variation in phenology. Discussion: PhenoCam data provide an objective and consistent means by which spatial and temporal patterns in vegetation phenology can be investigated. [ABSTRACT FROM AUTHOR]

Grasslands cover up to 40% of the mountain areas globally and 23% of the European Alps and affect numerous key ecological processes. An increasing number of optical sensors offer a great opportunity to monitor and address dynamic changes in the growth and status of grassland vegetation due to climatic and anthropogenic influences. Vegetation indices (VI) calculated from optical sensor data are a powerful tool in analyzing vegetation dynamics. However, different sensors have their own characteristics, advantages, and challenges in monitoring vegetation over space and time that require special attention when compared to or combined with each other. We used the Normalized Difference Vegetation Index (NDVI) derived from handheld spectrometers, station-based Spectral Reflectance Sensors (SRS), and Phenocams as well as the spaceborne Sentinel-2 Multispectral Instrument (MSI) for assessing growth and dynamic changes in four alpine meadows. We analyzed the similarity of the NDVI on diverse spatial scales and to what extent grassland dynamics of alpine meadows can be detected. We found that NDVI across all sensors traces the growing phases of the vegetation although we experienced a notable variability in NDVI signals among sensors and differences among the sites and plots. We noticed differences in signal saturation, sensor specific offsets, and in the detectability of short-term events. These NDVI inconsistencies depended on sensor-specific spatial and spectral resolutions and acquisition geometries, as well as on grassland management activities and vegetation growth during the year. We demonstrated that the combination of multiple-sensors enhanced the possibility for detecting short-term dynamic changes throughout the year for each of the stations. The presented findings are relevant for building and evaluating a combined sensor approach for consistent vegetation monitoring. [ABSTRACT FROM AUTHOR]

Tree–grass ecosystems are widely distributed. However, their phenology has not yet been fully characterized. The technique of repeated digital photographs for plant phenology monitoring (hereafter referred as PhenoCam) provide opportunities for long-term monitoring of plant phenology, and extracting phenological transition dates (PTDs, e.g., start of the growing season). Here, we aim to evaluate the utility of near-infrared-enabled PhenoCam for monitoring the phenology of structure (i.e., greenness) and physiology (i.e., gross primary productivity—GPP) at four tree–grass Mediterranean sites. We computed four vegetation indexes (VIs) from PhenoCams: (1) green chromatic coordinates (GCC), (2) normalized difference vegetation index (CamNDVI), (3) near-infrared reflectance of vegetation index (CamNIRv), and (4) ratio vegetation index (CamRVI). GPP is derived from eddy covariance flux tower measurement. Then, we extracted PTDs and their uncertainty from different VIs and GPP. The consistency between structural (VIs) and physiological (GPP) phenology was then evaluated. CamNIRv is best at representing the PTDs of GPP during the Green-up period, while CamNDVI is best during the Dry-down period. Moreover, CamNIRv outperforms the other VIs in tracking growing season length of GPP. In summary, the results show it is promising to track structural and physiology phenology of seasonally dry Mediterranean ecosystem using near-infrared-enabled PhenoCam. We suggest using multiple VIs to better represent the variation of GPP. [ABSTRACT FROM AUTHOR]