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This editorial, published in Frontiers in Marine Science, emphasizes the importance of using high-resolution observation methods to better understand the effects and mechanisms of coastal eutrophication, deoxygenation, and acidification. The coastal ocean is facing environmental challenges due to climate change and human activities, and traditional sampling methods are insufficient to fully comprehend these issues. The editorial highlights several studies that employ high-resolution methods to investigate topics such as submarine groundwater discharge, terrigenous particle transportation, seasonal oxygen depletion, and the driving forces behind ocean acidification. These studies offer valuable insights into the impacts of these environmental problems and contribute to our understanding of coastal ecosystems. It is important to note that the claims made in this article are those of the authors and do not necessarily reflect the views of their affiliated organizations or the publisher. Additionally, the publisher does not guarantee or endorse any products or claims made by manufacturers. This article is particularly relevant to library patrons conducting research in the field of marine science. [Extracted from the article]

Nitrogen (N) inputs to developed coastlines are linked with multiple ecosystem and socio-economic impacts worldwide such as algal blooms, habitat/resource deterioration, and hypoxia. This study investigated the microbial and biogeochemical processes associated with recurrent, seasonal bottom-water hypoxia in an urban estuary, western Long Island Sound (WLIS), that receives high N inputs. A 2-year (2020–2021) field study spanned two hypoxia events and entailed surface and bottom depth water sampling for dissolved nutrients as inorganic N (DIN; ammonia-N and nitrite + nitrate (N + N)), organic N, orthophosphate, organic carbon (DOC), as well as chlorophyll a and bacterial abundances. Physical water quality data were obtained from concurrent conductivity, temperature, and depth casts. Results showed that dissolved organic matter was highest at the most-hypoxic locations, DOC was negatively and significantly correlated with bottom-water dissolved oxygen (Pearson's r = −0.53, p = 0.05), and ammonia-N was the dominant DIN form pre-hypoxia before declining throughout hypoxia. N + N concentrations showed the reverse, being minimal pre-hypoxia then increasing during and following hypoxia, indicating that ammonia oxidation likely contributed to the switch in dominant DIN forms and is a key pathway in WLIS water column nitrification. Similarly, at the most hypoxic sampling site, bottom depth bacteria concentrations ranged ~ 1.8 × 104–1.1 × 105 cells ml−1 pre-hypoxia, declined throughout hypoxia, and were positively and significantly correlated (Pearson's r = 0.57; p = 0.03) with ammonia-N, confirming that hypoxia influences N-cycling within LIS. These findings provide novel insight to feedbacks between major biogeochemical (N and C) cycles and hypoxia in urban estuaries. [ABSTRACT FROM AUTHOR]

Seasonal and interannual variations of chlorophyll-a (chl-a) in the upper Gulf of Thailand (uGoT) were obtained using new regionally tuned algorithms applied to Moderate Resolution Imaging Spectroradiometer-Aqua. This long time-series (2003–2017) data were analyzed in the context of variations in environmental conditions associated with the Southeast Asian Monsoon. Chl-a distribution patterns were distinct for the non-monsoon (NOM), southwest-monsoon (SWM), and northeast-monsoon (NEM) seasons. During the SWM/NEM, high/low chl-a concentrations were associated with high/low precipitation and river discharge. During the NOM chl-a concentrations were generally low, because of low precipitation. In general, chl-a variability was tightly coupled to discharge from the Chao Phraya and Tha Chin rivers. Chl-a concentrations were generally higher in the north, but chl-a accumulation in the east/west of the uGoT could be linked to piling of freshwater to the east/west during the SWM/NEM caused by changes in wind direction and the reversal of currents. Interannual changes in chl-a were attributed to El Niño-Southern Oscillation (ENSO) rather than Indian Ocean Dipole (IOD) driven changes in precipitation, river discharge, and wind patterns. During the SWM, positive/negative chl-a anomalies coincided with high/low precipitation and river discharge during La Niña/El Niño. During the NEM, positive/negative chl-a anomaly coincided with high/low river discharge and strong/weak wind during La Niña/El Niño. Meanwhile, during NOM, positive chl-a anomaly could be attributed to anomalous high wind speed and precipitation during El Niño. [ABSTRACT FROM AUTHOR]

Questions of whether diurnal changes in carbon fixation affect the global carbon budget cannot be answered using the present generation of polar orbiting ocean color sensors that can only retrieve one image daily. Here, we present novel satellite‐derived indices of chlorophyll‐based production based on the Geostationary Ocean Color Imager (GOCI), whose hourly imaging capability offer the potential for direct estimates of net phytoplankton growth over hourly to seasonal time scales. Our results reveal large variations in net chlorophyll growth in the GOCI study region, both over the day and between seasons. Hourly changes in chlorophyll concentration are highest during spring while growth rates show maxima during the winter. We show seasonal relationships between growth and photon flux. Our study suggests that Geostationary Ocean Color data can be used to constrain phytoplankton productivity on diurnal time scales and be an essential tool to better understand diurnal growth patterns over large spatial regions. Plain Language Summary: The rate at which microscopic ocean plants, or phytoplankton, consume carbon dioxide represents a gap in scientific knowledge that needs to be filled in order to better model the earth system. To aid in this understanding we use a novel technique that allows us to track the growth behavior of phytoplankton in the Yellow Sea and the East Sea‐Japan Sea. This is enabled by using satellite data from the Geostationary Ocean Color Imager, which has the unprecedented ability to collect quality biological information from the ocean surface each daylight hour. We find that the results, while in agreement with local observations and other satellite studies, also contain information about how phytoplankton change over daily to annual cycles and how native communities adapt in response to the annual solar cycle. This information is useful to the ocean modeling community, that seeks to understand various ways in which phytoplankton communities affect the cycling of Earth's carbon. Key Points: The Geostationary Ocean Color Instrument tracks changes in net phytoplankton growth at hourly intervalsGains, losses, and net accumulations of chlorophyll show strong diurnal and seasonal variabilitySeasonality in net growth versus light provides evidence for seasonal evolution in phytoplankton community composition [ABSTRACT FROM AUTHOR]

Boron proxies in the calcium carbonate shells of planktic foraminifera are sensitive to seawater acidity, but B/Ca ratios and isotopic composition (i.e., δ11B) recorded by different foraminifer species grown under identical environmental conditions differ significantly and systematically. Specifically, Globigerinoides ruber displays higher B/Ca and δ11B than Trilobatus sacculifer and Orbulina universa. It has been hypothesized that these differences are caused by species‐specific rates of symbiont photosynthesis and habitat depth with greater symbiont photosynthesis elevating the microenvironmental pH of G. ruber relative to T. sacculifer and O. universa. Here we test this hypothesis by applying fast repetition rate fluorometry (FRRF), Chlorophyll a quantification, and symbiont counts in laboratory grown specimens of G. ruber (pink), T. sacculifer and O. universa to study species‐specific differences in symbiont photochemical quantum efficiencies. In addition, we report B/Ca shell profiles measured by laser ablation on the same specimens previously monitored by FRRF, and δ11B data of discrete populations of all three species grown under high and low light conditions in the laboratory. While the light experiments document that symbiont photosynthesis elevates pH and/or δ11B in the calcifying microenvironment of all three foraminifer species, the FRRF, Chl. a and symbiont abundance data are relatively uniform among the three species and do not scale consistently with intrashell B/Ca, or with observed species‐specific offsets in B/Ca or δ11B. Implications of these findings for foraminiferal physiology and biomineralization processes are discussed. Key Points: Symbiont photosynthesis raises pH in the microenvironment of planktic foraminiferaForaminifera species‐specific offsets in boron proxies are the same in laboratory culture and in the natural oceanic environmentSymbiont photosynthesis alone does not explain species‐specific boron proxy offsets in planktic foraminifera [ABSTRACT FROM AUTHOR]

The partial pressure of carbon dioxide (pCO2) was surveyed across the Amazon River plume and the surrounding western tropical North Atlantic Ocean (15–0°N, 43–60°W) during three oceanic expeditions (May–June 2010, September–October 2011, and July 2012). The survey timing was chosen according to previously described temporal variability in plume behavior due to changing river discharge and winds. In situ sea surface pCO2 and air‐sea CO2 flux exhibited robust linear relationships with sea surface salinity (SSS; 15 < SSS < 35), although the relationships differed among the surveys. Regional distributions of pCO2 and CO2 flux were estimated using SSS maps from high‐resolution ocean color satellite‐derived (MODIS‐Aqua) diffuse attenuation coefficient at 490 nm (Kd490) during the periods of study. Results confirmed that the plume is a net CO2 sink with distinctive temporal variability: the strongest drawdown occurred during the spring flood (−2.39 ± 1.29 mmol m−2 d−1 in June 2010), while moderate drawdown with relatively greater spatial variability was observed during the transitional stages of declining river discharge (−0.42 ± 0.76 mmol m−2 d−1 in September–October 2011). The region turned into a weak source in July 2012 (0.26 ± 0.62 mmol m−2 d−1) when strong CO2 uptake in the mid‐plume was overwhelmed by weak CO2 outgassing over a larger area in the outer plume. Outgassing near the mouth of the river was observed in July 2012. Our observations draw attention to the importance of assessing the variable impacts of biological activity, export, and air‐sea gas exchange before estimating regional CO2 fluxes from salinity distributions alone. Plain Language Summary: The Amazon River is the world's largest river with a watershed covering ∼3 million square miles. Its delivery of massive amounts of freshwater, organic material, and nutrients to the salty ocean produces an extensive 30–50 feet thick layer of fresher seawater, called the "plume", floating on the surface of the tropical Atlantic. This plume is spread by winds and currents to cover an additional ∼1 million square miles of the "river‐ocean continuum". We studied how this plume impacts the air‐sea exchange of the greenhouse gas, carbon dioxide (CO2). We combined shipboard measurements with satellite data to estimate the full regional impact (beyond what we could observe from the ship) and examined temporal variation in this exchange. We observed rapid atmospheric CO2 uptake by the plume in regions dominated by algal blooms. We also observed a large CO2 release from the plume near the river mouth, likely due to microbial community respiration of riverine material. Differences in the size and salinity distribution of the plume can greatly modify the plume's impact on CO2 exchange. Our observations draw attention to understanding these variable mechanisms before using the plume extent alone to estimate future impacts on carbon uptake by this key ocean region. Key Points: The Amazon River plume is a net sink for atmospheric CO2Plume size and salinity distribution affect the magnitude of the regional sinkTemporal variations in the relationship between salinity and CO2 flux occur due to changing wind speed, biological activity, and export [ABSTRACT FROM AUTHOR]

The recent trend of global warming has exerted a disproportionately strong influence on the Eurasian land surface, causing a steady decline in snow cover extent over the Himalayan-Tibetan Plateau region. Here we show that this loss of snow is undermining winter convective mixing and causing stratification of the upper layer of the Arabian Sea at a much faster rate than predicted by global climate models. Over the past four decades, the Arabian Sea has also experienced a profound loss of inorganic nitrate. In all probability, this is due to increased denitrification caused by the expansion of the permanent oxygen minimum zone and consequent changes in nutrient stoichiometries. These exceptional changes appear to be creating a niche particularly favorable to the mixotroph, Noctiluca scintillans which has recently replaced diatoms as the dominant winter, bloom forming organism. Although Noctiluca blooms are non-toxic, they can cause fish mortality by exacerbating oxygen deficiency and ammonification of seawater. As a consequence, their continued range expansion represents a significant and growing threat for regional fisheries and the welfare of coastal populations dependent on the Arabian Sea for sustenance. [ABSTRACT FROM AUTHOR]

The surface distribution of the phytoplankton community was investigated in July 2009, 2010, 2011, and 2013 on the mid-shelf of the East China Sea (ECS), which is under the influence of Changjiang River Diluted Water (CDW) and the Kuroshio Current. This study, based on a CHEMTAX analysis of phytoplankton pigments, revealed a predominance of cyanobacteria and prochlorophytes in the eastern ECS, which is perennially under the influence of oligotrophic Kuroshio Surface Water. Towards the west, on the mid-shelf of the ECS, the composition of the phytoplankton community varied from year to year. Diatoms dominated in 2009 and 2013, when dissolved inorganic phosphate (DIP) concentrations were higher than during 2010 and 2011. During the latter two years, characterized as high-nitrate years, a mixed population of cyanobacteria, chlorophytes, and other groups was observed. Cluster analysis based on the phytoplankton community composition together with a PCA of shipboard hydrographic and nutrient data for all four years helped to confirm that the summer phytoplankton community structure of the ECS was regulated by the mixing of water masses and the variability of nutrient ratios within the CDW as it moved offshore. Our results show that elevated DIP concentrations in the CDW favor the growth of diatoms and dinoflagellates. The primary pathway for DIP inputs appears to be the upwelling of high-phosphate subsurface waters along the coast of China. [ABSTRACT FROM AUTHOR]

Examination of a range of salinity products collectively suggests widespread freshening of the North Atlantic from the mid-2000s to the present. Monthly salinity fields reveal negative trends that differ in magnitude and significance between western and eastern regions of the North Atlantic. These differences can be attributed to the large negative interannual excursions in salinity in the western subpolar gyre and the Labrador Sea, which are not apparent in the central or eastern subpolar gyre. This study demonstrates that temporal trends in salinity in the northwest (including the Labrador Sea) are subject to mechanisms that are distinct from those responsible for the salinity trends in the central and eastern North Atlantic. In the western subpolar gyre a negative correlation between near-surface salinity and the circulation strength of the subpolar gyre suggests that negative salinity anomalies are connected to an intensification of the subpolar gyre, which is causing increased flux of freshwater from the East Greenland Current and subsequent transport into the Labrador Sea during the melting season. Analyses of sea surface wind fields suggest that the strength of the subpolar gyre is linked to the North Atlantic Oscillation– and Arctic Oscillation–driven changes in wind stress curl in the eastern subpolar gyre. If this trend of decreasing salinity continues, it has the potential to enhance water column stratification, reduce vertical fluxes of nutrients, and cause a decline in biological production and carbon export in the North Atlantic Ocean. [ABSTRACT FROM AUTHOR]

The Amazon River has the largest discharge of all rivers on Earth, and its complex plume system fuels a wide array of biogeochemical processes, across a large area of the western tropical North Atlantic. The plume thus stimulates microbial processes affecting carbon sequestration and nutrient cycles at a global scale. Chromosomal gene expression patterns of the 2.0 to 156 μm size-fraction eukaryotic microbial community were investigated in the Amazon River Plume, generating a robust dataset (more than 100 million mRNA sequences) that depicts the metabolic capabilities and interactions among the eukaryotic microbes. Combining classical oceanographic field measurements with metatranscriptomics yielded characterization of the hydrographic conditions simultaneous with a quantification of transcriptional activity and identity of the community. We highlight the patterns of eukaryotic gene expression for 31 biogeochemically significant gene targets hypothesized to be valuable within forecasting models. An advantage to this targeted approach is that the database of reference sequences used to identify the target genes was selectively constructed and highly curated optimizing taxonomic coverage, throughput, and the accuracy of annotations. A coastal diatom bloom highly expressed nitrate transporters and carbonic anhydrase presumably to support high growth rates and enhance uptake of low levels of dissolved nitrate and CO2. Diatom-diazotroph association (DDA: diatoms with nitrogen fixing symbionts) blooms were common when surface salinity was mesohaline and dissolved nitrate concentrations were below detection, and hence did not show evidence of nitrate utilization, suggesting they relied on ammonium transporters to aquire recently fixed nitrogen. These DDA blooms in the outer plume had rapid turnover of the photosystem D1 protein presumably caused by photodegradation under increased light penetration in clearer waters, and increased expression of silicon transporters as silicon became limiting. Expression of these genes, including carbonic anhydrase and transporters for nitrate and phosphate, were found to reflect the physiological status and biogeochemistry of river plume environments. These relatively stable patterns of eukaryotic transcript abundance occurred over modest spatiotemporal scales, with similarity observed in sample duplicates collected up to 2.45 km in space and 120 minutes in time. These results confirm the use of metatranscriptomics as a valuable tool to understand and predict microbial community function. [ABSTRACT FROM AUTHOR]

Largely due to size differences, mesozooplankton are important exporters of carbon and prey for larger organisms, while microzooplankton are important recyclers of nutrients, dominant grazers of phytoplankton, and a key link in the microbial loop. We investigated the relative importance of meso- and microzooplankton grazing in the western tropical North Atlantic Ocean (WTNA) and Amazon River plume. Sampling as part of the ANACONDAS project occurred in spring (May-June) 2010 during the peak outflow of the Amazon River and in fall (September-October) 2011 during the plume seasonal retroflection. Mesozooplankton grazing rates decreased with increasing salinity in both seasons, but during the fall both day and nighttime grazing rates were significantly negatively correlated with salinity. Mesozooplankton grazing was highest in plume-influenced surface waters (0-25 m), and usually dominated by smaller size classes (0.2-0.5 mm and 0.5-1.0 mm). Microzooplankton grazing accounted for approximately 68% of bulk phytoplankton growth across all stations. Comparison of meso- and microzooplankton grazing suggests a transition in food web dynamics from a mesozooplankton dominated 'export' structure in the plume transitioning to a microzooplankton dominated 'retention' structure at mesohaline and oceanic stations above sea surface salinity of 33. Comparison between the seasons suggests a seasonal planktonic succession of low mesozooplankton grazing during the spring peak discharge followed by higher grazing rates and impact by mesozooplankton during the fall retroflection. These results provide important baseline information required for examining effects of climate change on the planktonic food web of the WTNA and for use in biogeochemical models of the region. [ABSTRACT FROM AUTHOR]

The Costa Rica Dome (CRD) is an open-ocean upwelling system in the Eastern Tropical Pacific that overlies the ocean's largest oxygen minimum zone (OMZ). The region has unique characteristics, biomass dominance by picophytoplankton, suppressed diatoms, high biomass of higher consumers and presumptive trace metal limitation, but is poorly understood in terms of pelagic stock and process relationships, including productivity and production controls. Here, we describe the goals, project design, physical context and major findings of the Flux and Zinc Experiments cruise conducted in June-July 2010 to assess trophic flux relationships and elemental controls on phytoplankton in the CRD. Despite sampling during a year of suppressed summertime surface chlorophyll, cruise results show high productivity (~1 g C m-2 day-1), high new production relative to export, balanced production and grazing, disproportionate biomass-specific productivity of large phytoplankton and high zooplankton stocks. Zinc concentrations are low in surface waters relative to phosphorous and silicate in other regions, providing conditions conducive to picophytoplankton, like Synechococcus, with low Zn requirements. Experiments nonetheless highlight phytoplankton limitation or co-limitation by silicic acid, driven by a strong silica pump that is linked to low dissolution of biogenic silica in the cold shallow thermocline of the lower euphotic zone. [ABSTRACT FROM AUTHOR]

The Costa Rica Dome (CRD) is a unique open-ocean upwelling system, with picophytoplankton dominance of phytoplankton biomass and suppressed diatoms, yet paradoxically high export of biogenic silica. As a part of Flux and Zinc Experiments cruise in summer ( June-July 2010), we conducted shipboard incubation experiments in the CRD to examine the potential roles of Si, Zn, Fe and light as regulating factors of phytoplankton biomass and community structure. Estimates of photosynthetic quantum yields revealed an extremely stressed phytoplankton population that responded positively to additions of silicic acid, iron and zinc and higher light conditions. Size-fractioned Chl a yielded the surprising result that picophytoplankton, as well as larger phytoplankton, responded most to treatments with added silicic acid incubated at high incident light (HL + Si). The combination of Si and HL also led to increases in cell sizes of picoplankton, notably in Synechococcus. Such a response, coupled with the recent discovery of significant intracellular accumulation of Si in some picophytoplankton, suggests that small phytoplankton could play a potentially important role in Si cycling in the CRD, which may help to explain its peculiar export characteristics. [ABSTRACT FROM AUTHOR]

Variability of hydrographic conditions and primary and secondary productivity between cold and warm climatic regimes in the Bering Sea has been the subject of much study in recent years, while interannual variability within a single regime and across multiple trophic levels has been less well-documented. Measurements from an instrumented mooring on the southeastern shelf of the Bering Sea were analyzed for the spring-to-summer transitions within the cold regime years of 2009–2012 to investigate the interannual variability of hydrographic conditions, primary producer biomass, and acoustically-derived secondary producer and consumer abundance and community structure. Hydrographic conditions in 2012 were significantly different than in 2009, 2010, and 2011, driven largely by increased ice extent and thickness, later ice retreat, and earlier stratification of the water column. Primary producer biomass was more tightly coupled to hydrographic conditions in 2012 than in 2009 or 2011, and shallow and mid-column phytoplankton blooms tended to occur independent of one another. There was a high degree of variability in the relationships between different classes of secondary producers and hydrographic conditions, evidence of significant intra-consumer interactions, and trade-offs between different consumer size classes in each year. Phytoplankton blooms stimulated different populations of secondary producers in each year, and summer consumer populations appeared to determine dominant populations in the subsequent spring. Overall, primary producers and secondary producers were more tightly coupled to each other and to hydrographic conditions in the coldest year compared to the warmer years. The highly variable nature of the interactions between the atmospherically-driven hydrographic environment, primary and secondary producers, and within food webs underscores the need to revisit how climatic regimes within the Bering Sea are defined and predicted to function given changing climate scenarios. [ABSTRACT FROM AUTHOR]

The Republic of Maldives in the central Indian Ocean is home to large numbers of manta rays, Manta alfredi. They are known to undertake seasonal migrations within the Maldives, but these movements have not been well documented. The aims of this study were to map the seasonal distribution of manta rays within the Maldives, and to provide some indications of the physical and biological oceanographic processes affecting their distribution. The seasonal distribution of mantas was determined from a national survey of fishermen, interviews with experienced divers and personal observations. The data demonstrate that the distribution of mantas is strongly influenced by the seasonally reversing monsoon currents. Mantas occur on the downstream sides of the atolls, and are rare on the upstream sides, switching sides biannually as the monsoon currents change direction. These seasonally alternating currents are driven by monsoon winds which also alternate according to the season, and bring clear oceanic water to the upstream sides of the atolls. As the currents pass over the Maldives ridge, nutrient-rich waters are lifted to the surface, promoting phytoplankton blooms (as demonstrated by the distribution of chlorophyll- a) on the downstream sides of the atolls. This manifestation of the island mass effect supports an abundance of zooplankton, which in turn supports the manta rays. [ABSTRACT FROM AUTHOR]

Airborne hyperspectral data play an important role in remote sensing of coastal waters. However, before their application, atmospheric correction is required to remove or reduce the atmospheric effects caused by molecular and aerosol scattering and absorption. In this study, we first processed airborne hyperspectral CASI-1500 data acquired on 4 May 2019 over the Uljin coast of Korea with Polymer and then compared the performance with the other two widely used atmospheric correction approaches, i.e., 6S and FLAASH, to determine the most appropriate correction technique for CASI-1500 data in coastal waters. Our results show the superiority of Polymer over 6S and FLAASH in deriving the Rrs spectral shape and magnitude. The performance of Polymer was further evaluated by comparing CASI-1500 Rrs data with those obtained from the MODIS-Aqua sensor on 3 May 2019 and processed using Polymer. The spectral shapes of the derived Rrs from CASI-1500 and MODIS-Aqua matched well, but the magnitude of CASI-1500 Rrs was approximately 0.8 times lower than MODIS Rrs. The possible reasons for this difference were time difference (1 day) between CASI-1500 and MODIS data, higher land adjacency effect for MODIS-Aqua than for CASI-1500, and possible errors in MODIS Rrs from Polymer. [ABSTRACT FROM AUTHOR]

Presents information on a study which described a method used for estimating sea surface nitrate from space using satellite measurements of sea surface temperature and chlorophyll. Materials and method; Results and discussion; Conclusions.

Shoreline changes are of great importance for evaluating the interaction between humans and ecosystems in coastal areas. They serve as a useful metric for assessing the ecological costs of socioeconomic developmental activities along the coast. In this paper, we present an assessment of shoreline changes along the eastern coast of mainland China from ~1990 to 2019 by applying a novel method recently developed by us. This method which we call the Nearest Distance Method (NDM) is used to make a detailed assessment of shorelines delineated from Landsat Thematic Mapper (TM) and Operational Land Imager (OLI) images. The results indicate a dramatic decline in natural shorelines that correspond to the rapid increase in the construction of artificial shorelines, driven by China's economic growth. Of the entire coast of mainland China, the biggest change occurred along the Bohai Sea, where artificial shorelines expanded from 42.4% in ~1990 to 81.5% in 2019. Over this period, this study indicates that China lost > 60% of its biological shorelines, a trend that is especially worrisome because these include areas that were once biologically diverse and extremely rich. As anticipated, shoreline losses were greatest where regions of low economic value had been transformed to areas of higher economic value. Overall, this influence of human activities on shorelines in China is unprecedented. The repercussions of these changes on ecosystems, and the susceptibility of new shoreline developments to population growth and sea-level rise, need to be assessed urgently before additional changes are effected. [ABSTRACT FROM AUTHOR]

We investigated the spatio-temporal variability of chlorophyll-a (Chl-a) and total suspended matter (TSM) associated with spring–neap tidal cycles in the Ariake Sea, Japan. Our study relied on significantly improved, regionally-tuned datasets derived from the ocean color sensor Moderate Resolution Imaging Spectroradiometer (MODIS) Aqua over a 16-year period (2002–2017). The results revealed that spring–neap tidal variations in Chl-a and TSM within this macrotidal embayment (the Ariake Sea) are clearly different regionally and seasonally. Generally, the spring–neap tidal variability of Chl-a in the inner part of the Ariake Sea was controlled by TSM for seasons other than summer, whereas it was controlled by river discharge for summer. On the other hand, the contribution of TSM to the variability of Chl-a was not large for two areas in the middle of Ariake Sea where TSM was not abundant. This study demonstrates that ocean color satellite observations of Chl-a and TSM in the macrotidal embayment offer strong advantages for understanding the variations during the spring–neap tidal cycle. [ABSTRACT FROM AUTHOR]

The accurate retrieval of chlorophyll-a concentration (Chl-a) from ocean color satellite data is extremely challenging in turbid, optically complex coastal waters. Ariake Bay in Japan is a turbid semi-enclosed bay of great socio-economic significance, but it suffers from serious water quality problems, particularly due to red tide events. Chl-a derived from the MODerate resolution Imaging Spectroradiometer (MODIS) sensor on satellite Aqua in Ariake Bay was investigated, and it was determined that the causes of the errors were from inaccurate atmospheric correction and inappropriate in-water algorithms. To improve the accuracy of MODIS remote sensing reflectance (Rrs) in the blue and green bands, a simple method was adopted using in situ Rrs data. This method assumes that the error in MODIS Rrs(547) is small, and MODIS Rrs(412) can be estimated from MODIS Rrs(547) using a linear relation between in situ Rrs(412) and Rrs(547). We also showed that the standard MODIS Chl-a algorithm, OC3M, underestimated Chl-a, which was mostly due to water column turbidity. A new empirical switching algorithm was generated based on the relationship between in situ Chl-a and the blue-to-green band ratio, max(Rrs(443), Rrs(448)/Rrs(547), which was the same as the OC3M algorithm. The criterion of Rrs(667) of 0.005 sr−1 was used to evaluate the extent of turbidity for the switching algorithm. The results showed that the switching algorithm performed better than OC3M, and the root mean square error (RMSE) of estimated Chl-a decreased from 0.414 to 0.326. The RMSE for MODIS Chl-a using the recalculated Rrs and the switching algorithm was 0.287, which was a significant improvement from the RMSE of 0.610, which was obtained using standard MODIS Chl-a. Finally, the accuracy of our method was tested with an independent dataset collected by the local Fisheries Research Institute, and the results revealed that the switching algorithm with the recalculated Rrs reduced the RMSE of MODIS Chl-a from 0.412 of the standard to 0.335. [ABSTRACT FROM AUTHOR]