1. High-throughput analysis of the transcriptional patterns of sexual genes in malaria.
- Author
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Camacho, Abel Cruz, Kiper, Edo, Oren, Sonia, Zaharoni, Nir, Nir, Netta, Sofer, Noam, Noy, Yael, David, Bar Ben, Rivkin, Anna, Rotkopf, Ron, Michael, Dan, Carvalho, Teresa G., and Regev‑Rudzki, Neta
- Abstract
Background Plasmodium falciparum (Pf) is the leading protozoan causing malaria, the most devastating parasitic dis‑ ease. To ensure transmission, a small subset of Pf parasites diferentiate into the sexual forms (gametocytes). Since the abundance of these essential parasitic forms is extremely low within the human host, little is currently known about the molecular regulation of their sexual diferentiation, highlighting the need to develop tools to investigate Pf gene expression during this fundamental mechanism. Methods We developed a high-throughput quantitative Reverse-Transcription PCR (RT-qPCR) platform to robustly monitor Pf transcriptional patterns, in particular, systematically profling the transcriptional pattern of a large panel of gametocyte-related genes (GRG). Initially, we evaluated the technical performance of the systematic RT-qPCR platform to ensure it complies with the accepted quality standards for: (i) RNA extraction, (ii) cDNA synthesis and (iii) evaluation of gene expression through RT-qPCR. We then used this approach to monitor alterations in gene expres‑ sion of a panel of GRG upon treatment with gametocytogenesis regulators. Results We thoroughly elucidated GRG expression profles under treatment with the antimalarial drug dihydroar‑ temisinin (DHA) or the metabolite choline over the course of a Pf blood cycle (48 h). We demonstrate that both signifcantly alter the expression pattern of PfAP2-G, the gametocytogenesis master regulator. However, they also markedly modify the developmental rate of the parasites and thus might bias the mRNA expression. Additionally, we screened the efect of the metabolites lactate and kynurenic acid, abundant in severe malaria, as potential regulators of gametocytogenesis. Conclusions Our data demonstrate that the high-throughput RT-qPCR method enables studying the immediate transcriptional response initiating gametocytogenesis of the parasites from a very low volume of malaria-infected RBC samples. The obtained data expand the current knowledge of the initial alterations in mRNA profles of GRG upon treatment with reported regulators. In addition, using this method emphasizes that asexual parasite stage composi‑ tion is a crucial element that must be considered when interpreting changes in GRG expression by RT-qPCR, specif‑ cally when screening for novel compounds that could regulate Pf sexual diferentiation. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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