218 results on '"Bohr, Vilhelm A."'
Search Results
2. FOXO-regulated OSER1 reduces oxidative stress and extends lifespan in multiple species.
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Song, Jiangbo, Li, Zhiquan, Zhou, Lei, Chen, Xin, Sew, Wei Qi Guinevere, Herranz, Héctor, Ye, Zilu, Olsen, Jesper Velgaard, Li, Yuan, Nygaard, Marianne, Christensen, Kaare, Tong, Xiaoling, Bohr, Vilhelm A., Rasmussen, Lene Juel, and Dai, Fangyin
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CELLULAR aging ,OXIDATIVE stress ,CAENORHABDITIS elegans ,TRANSCRIPTION factors ,GENETIC transcription ,LONGEVITY - Abstract
FOXO transcription factors modulate aging-related pathways and influence longevity in multiple species, but the transcriptional targets that mediate these effects remain largely unknown. Here, we identify an evolutionarily conserved FOXO target gene, Oxidative stress-responsive serine-rich protein 1 (OSER1), whose overexpression extends lifespan in silkworms, nematodes, and flies, while its depletion correspondingly shortens lifespan. In flies, overexpression of OSER1 increases resistance to oxidative stress, starvation, and heat shock, while OSER1-depleted flies are more vulnerable to these stressors. In silkworms, hydrogen peroxide both induces and is scavenged by OSER1 in vitro and in vivo. Knockdown of OSER1 in Caenorhabditis elegans leads to increased ROS production and shorter lifespan, mitochondrial fragmentation, decreased ATP production, and altered transcription of mitochondrial genes. Human proteomic analysis suggests that OSER1 plays roles in oxidative stress response, cellular senescence, and reproduction, which is consistent with the data and suggests that OSER1 could play a role in fertility in silkworms and nematodes. Human studies demonstrate that polymorphic variants in OSER1 are associated with human longevity. In summary, OSER1 is an evolutionarily conserved FOXO-regulated protein that improves resistance to oxidative stress, maintains mitochondrial functional integrity, and increases lifespan in multiple species. Additional studies will clarify the role of OSER1 as a critical effector of healthy aging. FOXO transcription factors are known to promote longevity via effects on transcriptional targets. In this study, the authors identify OSER1 as an evolutionarily conserved target of FOXO. OSER1 expression improves resistance to oxidative stress, supports mitochondrial function, and extends lifespan across multiple species. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Markers of Mitochondrial Function and DNA Repair Associated with Physical Function in Centenarians.
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Sanchez-Roman, Ines, Ferrando, Beatriz, Myrup Holst, Camilla, Mengel-From, Jonas, Hoei Rasmussen, Signe, Thinggaard, Mikael, Bohr, Vilhelm A., Christensen, Kaare, and Stevnsner, Tinna
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DNA ligases ,MONONUCLEAR leukocytes ,MITOCHONDRIAL DNA ,BRAIN-derived neurotrophic factor ,CENTENARIANS ,GRIP strength - Abstract
Mitochondrial dysfunction and genomic instability are key hallmarks of aging. The aim of this study was to evaluate whether maintenance of physical capacities at very old age is associated with key hallmarks of aging. To investigate this, we measured mitochondrial bioenergetics, mitochondrial DNA (mtDNA) copy number and DNA repair capacity in peripheral blood mononuclear cells from centenarians. In addition, circulating levels of NAD+/NADH, brain-derived neurotrophic factor (BDNF) and carbonylated proteins were measured in plasma and these parameters were correlated to physical capacities. Centenarians without physical disabilities had lower mitochondrial respiration values including ATP production, reserve capacity, maximal respiration and non-mitochondrial oxygen-consumption rate and had higher mtDNA copy number than centenarians with moderate and severe disabilities (p < 0.05). In centenarian females, grip strength had a positive association with mtDNA copy number (p < 0.05), and a borderline positive trend for activity of the central DNA repair enzyme, APE 1 (p = 0.075), while a negative trend was found with circulating protein carbonylation (p = 0.07) in the entire cohort. Lastly, a trend was observed for a negative association between BDNF and activity of daily living disability score (p = 0.06). Our results suggest that mechanisms involved in maintaining mitochondrial function and genomic stability may be associated with maintenance of physical function in centenarians. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Urolithin A improves Alzheimer's disease cognition and restores mitophagy and lysosomal functions.
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Hou, Yujun, Chu, Xixia, Park, Jae‐Hyeon, Zhu, Qing, Hussain, Mansoor, Li, Zhiquan, Madsen, Helena Borland, Yang, Beimeng, Wei, Yong, Wang, Yue, Fang, Evandro F., Croteau, Deborah L., and Bohr, Vilhelm A.
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- 2024
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5. Salidroside promotes healthy longevity by interfering with HSP90 activity.
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Zhang, Jianfei, Li, Zhiquan, Song, Jiangbo, Zhou, Lei, Chen, Xin, Ge, Wen, Dong, Tianyi, Luo, Yuxin, Mao, Ting, Li, Zheng, Tan, Duan, Rasmussen, Lene Juel, Bohr, Vilhelm A., Tong, Xiaoling, and Dai, Fangyin
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HEAT shock proteins ,BIOACTIVE glasses ,ROSEROOT ,SMALL molecules ,POPULATION aging ,LONGEVITY ,AGING prevention - Abstract
Aging is a risk factor for human health and quality of life. Screening and development of novel supplements and medications to combat aging and delay the incidence of age-related diseases are of great significance. In this study, salidroside (SA), a primary natural small molecule from Rhodiola rosea, was investigated regarding its effects on life and healthspan and the underlying molecular mechanism(s) of anti-aging and antioxidation. Our results showed that SA effectively prolonged lifespan and exhibited anti-aging and antioxidative properties. Computer-assisted methods, label-free interaction analysis, and in vitro assays showed that SA directly bound heat shock protein 90 (HSP90). Furthermore, SA significantly inhibited the ATPase activity of HSP90, affecting the interaction between HSP90 and its interacting proteins and the expression of downstream genes to regulate lifespan and the oxidative stress response. Our findings provided new insights into the pharmacological properties of SA across multiple species and its potential as an anti-aging drug. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Long‐term NAD+ supplementation prevents the progression of age‐related hearing loss in mice.
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Okur, Mustafa N., Sahbaz, Burcin Duan, Kimura, Risako, Manor, Uri, Patel, Jaimin, Park, Jae‐Hyeon, Andrade, Leo, Puligilla, Chandrakala, Croteau, Deborah L., and Bohr, Vilhelm A.
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NAD (Coenzyme) ,HEARING disorders ,ALZHEIMER'S disease ,NOISE-induced deafness ,COCHLEAR nucleus ,AUDITORY neurons ,PREMATURE aging (Medicine) ,PARKINSON'S disease - Abstract
Age‐related hearing loss (ARHL) is the most common sensory disability associated with human aging. Yet, there are no approved measures for preventing or treating this debilitating condition. With its slow progression, continuous and safe approaches are critical for ARHL treatment. Nicotinamide Riboside (NR), a NAD+ precursor, is well tolerated even for long‐term use and is already shown effective in various disease models including Alzheimer's and Parkinson's disease. It has also been beneficial against noise‐induced hearing loss and in hearing loss associated with premature aging. However, its beneficial impact on ARHL is not known. Using two different wild‐type mouse strains, we show that long‐term NR administration prevents the progression of ARHL. Through transcriptomic and biochemical analysis, we find that NR administration restores age‐associated reduction in cochlear NAD+ levels, upregulates biological pathways associated with synaptic transmission and PPAR signaling, and reduces the number of orphan ribbon synapses between afferent auditory neurons and inner hair cells. We also find that NR targets a novel pathway of lipid droplets in the cochlea by inducing the expression of CIDEC and PLIN1 proteins that are downstream of PPAR signaling and are key for lipid droplet growth. Taken together, our results demonstrate the therapeutic potential of NR treatment for ARHL and provide novel insights into its mechanism of action. [ABSTRACT FROM AUTHOR]
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- 2023
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7. Boosting NAD ameliorates hematopoietic impairment linked to short telomeres in vivo.
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Stock, Amanda J., Ayyar, Saipriya, Kashyap, Amogh, Wang, Yunong, Yanai, Hagai, Starost, Matthew F., Tanaka-Yano, Mayuri, Bodogai, Monica, Sun, Chongkui, Wang, Yajun, Gong, Yi, Puligilla, Chandrakala, Fang, Evandro F., Bohr, Vilhelm A., Liu, Yie, and Beerman, Isabel
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TELOMERASE reverse transcriptase ,TELOMERES ,ENTERITIS ,HEMATOPOIETIC stem cells ,WEIGHT loss - Abstract
Short telomeres are a defining feature of telomere biology disorders (TBDs), including dyskeratosis congenita (DC), for which there is no effective general cure. Patients with TBDs often experience bone marrow failure. NAD, an essential metabolic coenzyme, is decreased in models of DC. Herein, using telomerase reverse transcriptase null (Tert
−/− ) mice with critically short telomeres, we investigated the effect of NAD supplementation with the NAD precursor, nicotinamide riboside (NR), on features of health span disrupted by telomere impairment. Our results revealed that NR ameliorated body weight loss in Tert−/− mice and improved telomere integrity and telomere dysfunction-induced systemic inflammation. NR supplementation also mitigated myeloid skewing of Tert−/− hematopoietic stem cells. Furthermore, NR alleviated villous atrophy and inflammation in the small intestine of Tert−/− transplant recipient mice. Altogether, our findings support NAD intervention as a potential therapeutic strategy to enhance aspects of health span compromised by telomere attrition. [ABSTRACT FROM AUTHOR]- Published
- 2023
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8. Loss of smelling is an early marker of aging and is associated with inflammation and DNA damage in C57BL/6J mice.
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Dan, Xiuli, Yang, Beimeng, McDevitt, Ross A., Gray, Samuel, Chu, Xixia, Claybourne, Quia, Figueroa, David M., Zhang, Yongqing, Croteau, Deborah L., and Bohr, Vilhelm A.
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OLFACTORY receptors ,LABORATORY mice ,NAD (Coenzyme) ,DNA damage ,OLFACTORY bulb ,ALZHEIMER'S disease ,AGING - Abstract
Olfactory dysfunction is a prevalent symptom and an early marker of age‐related neurodegenerative diseases in humans, including Alzheimer's and Parkinson's Diseases. However, as olfactory dysfunction is also a common symptom of normal aging, it is important to identify associated behavioral and mechanistic changes that underlie olfactory dysfunction in nonpathological aging. In the present study, we systematically investigated age‐related behavioral changes in four specific domains of olfaction and the molecular basis in C57BL/6J mice. Our results showed that selective loss of odor discrimination was the earliest smelling behavioral change with aging, followed by a decline in odor sensitivity and detection while odor habituation remained in old mice. Compared to behavioral changes related with cognitive and motor functions, smelling loss was among the earliest biomarkers of aging. During aging, metabolites related with oxidative stress, osmolytes, and infection became dysregulated in the olfactory bulb, and G protein coupled receptor‐related signaling was significantly down regulated in olfactory bulbs of aged mice. Poly ADP‐ribosylation levels, protein expression of DNA damage markers, and inflammation increased significantly in the olfactory bulb of older mice. Lower NAD+ levels were also detected. Supplementation of NAD+ through NR in water improved longevity and partially enhanced olfaction in aged mice. Our studies provide mechanistic and biological insights into the olfaction decline during aging and highlight the role of NAD+ for preserving smelling function and general health. [ABSTRACT FROM AUTHOR]
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- 2023
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9. Werner syndrome protein works as a dimer for unwinding and replication fork regression.
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Shin, Soochul, Hyun, Kwangbeom, Lee, Jinwoo, Joo, Dongwon, Kulikowicz, Tomasz, Bohr, Vilhelm A, Kim, Jaehoon, and Hohng, Sungchul
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- 2023
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10. Effects of lifespan-extending interventions on cognitive healthspan.
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Culig, Luka, Sahbaz, Burcin Duan, and Bohr, Vilhelm A.
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HUNTINGTON disease ,OLDER people ,COGNITIVE aging ,ALZHEIMER'S disease ,ENVIRONMENTAL enrichment - Abstract
Ageing is known to be the primary risk factor for most neurodegenerative diseases, including Alzheimer's disease, Parkinson's disease and Huntington's disease. They are currently incurable and worsen over time, which has broad implications in the context of lifespan and healthspan extension. Adding years to life and even to physical health is suboptimal or even insufficient, if cognitive ageing is not adequately improved. In this review, we will examine how interventions that have the potential to extend lifespan in animals affect the brain, and if they would be able to thwart or delay the development of cognitive dysfunction and/or neurodegeneration. These interventions range from lifestyle (caloric restriction, physical exercise and environmental enrichment) through pharmacological (nicotinamide adenine dinucleotide precursors, resveratrol, rapamycin, metformin, spermidine and senolytics) to epigenetic reprogramming. We argue that while many of these interventions have clear potential to improve cognitive health and resilience, large-scale and long-term randomised controlled trials are needed, along with studies utilising washout periods to determine the effects of supplementation cessation, particularly in aged individuals. [ABSTRACT FROM AUTHOR]
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- 2023
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11. Mitochondrial PARP1 regulates NAD+-dependent poly ADP-ribosylation of mitochondrial nucleoids.
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Lee, Jong-Hyuk, Hussain, Mansoor, Kim, Edward W., Cheng, Shang-Jung, Leung, Anthony K. L., Fakouri, Nima Borhan, Croteau, Deborah L., and Bohr, Vilhelm A.
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- 2022
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12. Lamin A/C impairments cause mitochondrial dysfunction by attenuating PGC1α and the NAMPT-NAD+ pathway.
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Maynard, Scott, Hall, Arnaldur, Galanos, Panagiotis, Rizza, Salvatore, Yamamoto, Tatsuro, Gram, Helena Hagner, Munk, Sebastian H N, Shoaib, Muhammad, Sørensen, Claus Storgaard, Bohr, Vilhelm A, Lerdrup, Mads, Maya-Mendoza, Apolinar, and Bartek, Jiri
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- 2022
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13. Nicotinamide adenine dinucleotide supplementation drives gut microbiota variation in Alzheimer's mouse model.
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Xixia Chu, Yujun Hou, Qiong Meng, Croteau, Deborah L., Yong Wei, Supriyo De, Becker, Kevin G., and Bohr, Vilhelm A.
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BIOLOGICAL models ,ALZHEIMER'S disease ,GUT microbiome ,ANIMAL experimentation ,NUCLEOTIDES ,NEUROINFLAMMATION ,AGING ,RESEARCH funding ,MICE - Abstract
Alzheimer's disease (AD) is the most common neurodegenerative disease. Growing evidence suggests an important role for gut dysbiosis and gut microbiota-host interactions in aging and neurodegeneration. Our previous works have demonstrated that supplementation with the nicotinamide adenine dinucleotide (NAD
+ ) precursor, nicotinamide riboside (NR), reduced the brain features of AD, including neuroinflammation, deoxyribonucleic acid (DNA) damage, synaptic dysfunction, and cognitive impairment. However, the impact of NR administration on the intestinal microbiota of AD remains unknown. In this study, we investigated the relationship between gut microbiota and NR treatment in APP/PS1 transgenic (AD) mice. Compared with wild type (WT) mice, the gut microbiota diversity in AD mice was lower and the microbiota composition and enterotype were significantly different. Moreover, there were gender differences in gut microbiome between female and male AD mice. After supplementation with NR for 8 weeks, the decreased diversity and perturbated microbial compositions were normalized in AD mice. This included the species Oscillospira, Butyricicoccus, Desulfovibrio, Bifidobacterium, Olsenella, Adlercreutzia, Bacteroides, Akkermansia, and Lactobacillus. Our results indicate an interplay between NR and host-microbiota in APP/PS1 mice, suggesting that the effect of NR on gut dysbiosis may be an important component in its therapeutic functions in AD. [ABSTRACT FROM AUTHOR]- Published
- 2022
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14. Molecular markers of DNA repair and brain metabolism correlate with cognition in centenarians.
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Sanchez-Roman, Ines, Ferrando, Beatriz, Holst, Camilla Myrup, Mengel-From, Jonas, Rasmussen, Signe Høi, Thinggaard, Mikael, Bohr, Vilhelm A., Christensen, Kaare, and Stevnsner, Tinna
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CENTENARIANS ,DNA repair ,BRAIN metabolism ,GENETIC markers ,MONONUCLEAR leukocytes - Abstract
Oxidative stress is an important factor in age-associated neurodegeneration. Accordingly, mitochondrial dysfunction and genomic instability have been considered as key hallmarks of aging and have important roles in age-associated cognitive decline and neurodegenerative disorders. In order to evaluate whether maintenance of cognitive abilities at very old age is associated with key hallmarks of aging, we measured mitochondrial bioenergetics, mitochondrial DNA copy number and DNA repair capacity in peripheral blood mononuclear cells from centenarians in a Danish 1915 birth cohort (n = 120). Also, the circulating levels of brain-derived neurotrophic factor, NAD
+ /NADH and carbonylated proteins were measured in plasma of the centenarians and correlated to cognitive capacity. Mitochondrial respiration was well preserved in the centenarian cohort when compared to young individuals (21–35 years of age, n = 33). When correlating cognitive performance of the centenarians with mitochondrial function such as basal respiration, ATP production, reserve capacity and maximal respiration, no overall correlations were observed, but when stratifying by sex, inverse associations were observed in the males (p < 0.05). Centenarians with the most severe cognitive impairment displayed the lowest activity of the central DNA repair enzyme, APE1 (p < 0.05). A positive correlation between cognitive capacity and levels of NAD+ /NADH was observed (p < 0.05), which may be because NAD+ /NADH consuming enzyme activities strive to reduce the oxidative DNA damage load. Also, circulating protein carbonylation was lowest in centenarians with highest cognitive capacity (p < 0.05). An opposite trend was observed for levels of brain-derived neurotrophic factor (p = 0.17). Our results suggest that maintenance of cognitive capacity at very old age may be associated with cellular mechanisms related to oxidative stress and DNA metabolism. [ABSTRACT FROM AUTHOR]- Published
- 2022
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15. CDK2 phosphorylation of Werner protein (WRN) contributes to WRN's DNA double‐strand break repair pathway choice.
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Lee, Jong‐Hyuk, Shamanna, Raghavendra A., Kulikowicz, Tomasz, Borhan Fakouri, Nima, Kim, Edward W., Christiansen, Louise S., Croteau, Deborah L., and Bohr, Vilhelm A.
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DOUBLE-strand DNA breaks ,CYCLIN-dependent kinases ,PHOSPHORYLATION ,DNA repair ,WERNER'S syndrome - Abstract
Werner syndrome (WS) is an accelerated aging disorder characterized by genomic instability, which is caused by WRN protein deficiency. WRN participates in DNA metabolism including DNA repair. In a previous report, we showed that WRN protein is recruited to laser‐induced DNA double‐strand break (DSB) sites during various stages of the cell cycle with similar intensities, supporting that WRN participates in both non‐homologous end joining (NHEJ) and homologous recombination (HR). Here, we demonstrate that the phosphorylation of WRN by CDK2 on serine residue 426 is critical for WRN to make its DSB repair pathway choice between NHEJ and HR. Cells expressing WRN engineered to mimic the unphosphorylated or phosphorylation state at serine 426 showed abnormal DSB recruitment, altered RPA interaction, strand annealing, and DSB repair activities. The CDK2 phosphorylation on serine 426 stabilizes WRN's affinity for RPA, likely increasing its long‐range resection at the end of DNA strands, which is a crucial step for HR. Collectively, the data shown here demonstrate that a CDK2‐dependent phosphorylation of WRN regulates DSB repair pathway choice and cell cycle participation. [ABSTRACT FROM AUTHOR]
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- 2021
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16. NAD+ augmentation with nicotinamide riboside improves lymphoid potential of Atm−/− and old mice HSCs.
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Zong, Le, Tanaka-Yano, Mayuri, Park, Bongsoo, Yanai, Hagai, Turhan, Ferda T., Croteau, Deborah L., Tian, Jane, Fang, Evandro F., Bohr, Vilhelm A., and Beerman, Isabel
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- 2021
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17. NAD+ supplementation reduces neuroinflammation and cell senescence in a transgenic mouse model of Alzheimer's disease via cGAS-STING.
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Yujun Hou, Yong Wei, Lautrup, Sofie, Beimeng Yang, Yue Wang, Cordonnier, Stephanie, Mattson, Mark P., Croteau, Deborah L., and Bohr, Vilhelm A.
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LABORATORY mice ,CELLULAR aging ,ALZHEIMER'S disease ,TRANSGENIC mice ,NEUROINFLAMMATION ,COMMERCIAL products - Abstract
Alzheimer's disease (AD) is a progressive and fatal neurodegenerative disorder. Impaired neuronal bioenergetics and neuroinflammation are thought to play key roles in the progression of AD, but their interplay is not clear. Nicotinamide adenine dinucleotide (NAD
+ ) is an important metabolite in all human cells in which it is pivotal for multiple processes including DNA repair and mitophagy, both of which are impaired in AD neurons. Here, we report that levels of NAD+ are reduced and markers of inflammation increased in the brains of APP/PS1 mutant transgenic mice with beta-amyloid pathology. Treatment of APP/PS1 mutant mice with the NAD+ precursor nicotinamide riboside (NR) for 5 mo increased brain NAD+ levels, reduced expression of proinflammatory cytokines, and decreased activation of microglia and astrocytes. NR treatment also reduced NLRP3 inflammasome expression, DNA damage, apoptosis, and cellular senescence in the AD mouse brains. Activation of cyclic GMP-AMP synthase (cGAS) and stimulator of interferon genes (STING) are associated with DNA damage and senescence. cGAS-STING elevation was observed in the AD mice and normalized by NR treatment. Cell culture experiments using microglia suggested that the beneficial effects of NR are, in part, through a cGAS-STINGdependent pathway. Levels of ectopic (cytoplasmic) DNA were increased in APP/PS1 mutant mice and human AD fibroblasts and down-regulated by NR. NR treatment induced mitophagy and improved cognitive and synaptic functions in APP/PS1 mutant mice. Our findings suggest a role for NAD+ depletion-mediated activation of cGAS-STING in neuroinflammation and cellular senescence in AD. [ABSTRACT FROM AUTHOR]- Published
- 2021
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18. LEO1 is a partner for Cockayne syndrome protein B (CSB) in response to transcription-blocking DNA damage.
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Tiwari, Vinod, Kulikowicz, Tomasz, Wilson, David M, and Bohr, Vilhelm A
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- 2021
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19. NEK1 deficiency affects mitochondrial functions and the transcriptome of key DNA repair pathways.
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Martins, Mariana Bonjiorno, Perez, Arina Marina, Bohr, Vilhelm A, Wilson, David M, and Kobarg, Jörg
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CELL determination ,MITOCHONDRIAL DNA ,MITOCHONDRIA ,PHENOTYPES ,DNA repair ,DNA damage - Abstract
Previous studies have indicated important roles for NIMA-related kinase 1 (NEK1) in modulating DNA damage checkpoints and DNA repair capacity. To broadly assess the contributions of NEK1 to genotoxic stress and mitochondrial functions, we characterised several relevant phenotypes of NEK1 CRISPR knockout (KO) and wild-type (WT) HAP1 cells. Our studies revealed that NEK1 KO cells resulted in increased apoptosis and hypersensitivity to the alkylator methyl methanesulfonate, the radiomimetic bleomycin and UVC light, yet increased resistance to the crosslinker cisplatin. Mitochondrial functionalities were also altered in NEK1 KO cells, with phenotypes of reduced mitophagy, increased total mitochondria, elevated levels of reactive oxygen species, impaired complex I activity and higher amounts of mitochondrial DNA damage. RNA-seq transcriptome analysis coupled with quantitative real-time PCR studies comparing NEK1 KO cells with NEK1 overexpressing cells revealed that the expression of genes involved in DNA repair pathways, such as base excision repair, nucleotide excision repair and double-strand break repair, are altered in a way that might influence genotoxin resistance. Together, our studies underline and further support that NEK1 serves as a hub signalling kinase in response to DNA damage, modulating DNA repair capacity, mitochondrial activity and cell fate determination. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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20. NAD+ supplementation prevents STING‐induced senescence in ataxia telangiectasia by improving mitophagy.
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Yang, Beimeng, Dan, Xiuli, Hou, Yujun, Lee, Jong‐Hyuk, Wechter, Noah, Krishnamurthy, Sudarshan, Kimura, Risako, Babbar, Mansi, Demarest, Tyler, McDevitt, Ross, Zhang, Shiliang, Zhang, Yongqing, Mattson, Mark P., Croteau, Deborah L., and Bohr, Vilhelm A.
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ATAXIA telangiectasia ,NEURODEGENERATION ,PREMATURE aging (Medicine) ,AGE factors in disease ,GENES - Abstract
Senescence phenotypes and mitochondrial dysfunction are implicated in aging and in premature aging diseases, including ataxia telangiectasia (A‐T). Loss of mitochondrial function can drive age‐related decline in the brain, but little is known about whether improving mitochondrial homeostasis alleviates senescence phenotypes. We demonstrate here that mitochondrial dysfunction and cellular senescence with a senescence‐associated secretory phenotype (SASP) occur in A‐T patient fibroblasts, and in ATM‐deficient cells and mice. Senescence is mediated by stimulator of interferon genes (STING) and involves ectopic cytoplasmic DNA. We further show that boosting intracellular NAD+ levels with nicotinamide riboside (NR) prevents senescence and SASP by promoting mitophagy in a PINK1‐dependent manner. NR treatment also prevents neurodegeneration, suppresses senescence and neuroinflammation, and improves motor function in Atm−/− mice. Our findings suggest a central role for mitochondrial dysfunction‐induced senescence in A‐T pathogenesis, and that enhancing mitophagy as a potential therapeutic intervention. [ABSTRACT FROM AUTHOR]
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- 2021
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21. Current and emerging roles of Cockayne syndrome group B (CSB) protein.
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Tiwari, Vinod, Baptiste, Beverly A, Okur, Mustafa N, and Bohr, Vilhelm A
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- 2021
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22. Self‐assembly of multi‐component mitochondrial nucleoids via phase separation.
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Feric, Marina, Demarest, Tyler G, Tian, Jane, Croteau, Deborah L, Bohr, Vilhelm A, and Misteli, Tom
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MITOCHONDRIAL DNA ,PHASE separation ,NUCLEOIDS ,MITOCHONDRIA ,PROGERIA ,PREMATURE aging (Medicine) ,MITOCHONDRIAL proteins - Abstract
Mitochondria contain an autonomous and spatially segregated genome. The organizational unit of their genome is the nucleoid, which consists of mitochondrial DNA (mtDNA) and associated architectural proteins. Here, we show that phase separation is the primary physical mechanism for assembly and size control of the mitochondrial nucleoid (mt‐nucleoid). The major mtDNA‐binding protein TFAM spontaneously phase separates in vitro via weak, multivalent interactions into droplets with slow internal dynamics. TFAM and mtDNA form heterogenous, viscoelastic structures in vitro, which recapitulate the dynamics and behavior of mt‐nucleoids in vivo. Mt‐nucleoids coalesce into larger droplets in response to various forms of cellular stress, as evidenced by the enlarged and transcriptionally active nucleoids in mitochondria from patients with the premature aging disorder Hutchinson‐Gilford Progeria Syndrome (HGPS). Our results point to phase separation as an evolutionarily conserved mechanism of genome organization. SYNOPSIS: A dedicated set of proteins packages mitochondrial DNA (mtDNA) into nucleoprotein complexes to form mitochondrial nucleoids (mt‐nucleoids). Here, mt‐nucleoids are found to behave as biomolecular condensates, assembled via interactions between mtDNA and the main packaging protein TFAM. The mitochondrial genome is organized by phase separation.TFAM and mtDNA combine to form viscoelastic, multiphase droplets in vitro.TFAM surfactant behavior is mediated by its N‐terminus favoring binding with DNA and its C‐terminus preferentially interacting with mt‐nucleoid associated proteins.Mitochondrial nucleoids exhibit similar phase separation behavior in vivo.Coalescence and enlargement of mt‐nucleoids occur upon loss of mitochondrial homeostasis and in prematurely aged cells and may be associated with mitochondrial dysfunction. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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23. DNA damage and mitochondria in cancer and aging.
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Patel, Jaimin, Baptiste, Beverly A, Kim, Edward, Hussain, Mansoor, Croteau, Deborah L, and Bohr, Vilhelm A
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DNA damage ,CANCER treatment ,MITOCHONDRIAL DNA ,PREMATURE aging (Medicine) ,MITOCHONDRIA ,DNA mismatch repair - Abstract
Age and DNA repair deficiencies are strong risk factors for developing cancer. This is reflected in the comorbidity of cancer with premature aging diseases associated with DNA damage repair deficiencies. Recent research has suggested that DNA damage accumulation, telomere dysfunction and the accompanying mitochondrial dysfunction exacerbate the aging process and may increase the risk of cancer development. Thus, an area of interest in both cancer and aging research is the elucidation of the dynamic crosstalk between the nucleus and the mitochondria. In this review, we discuss current research on aging and cancer with specific focus on the role of mitochondrial dysfunction in cancer and aging as well as how nuclear to mitochondrial DNA damage signaling may be a driving factor in the increased cancer incidence with aging. We suggest that therapeutic interventions aimed at the induction of autophagy and mediation of nuclear to mitochondrial signaling may provide a mechanism for healthier aging and reduced tumorigenesis. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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24. Cockayne syndrome proteins CSA and CSB maintain mitochondrial homeostasis through NAD+ signaling.
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Okur, Mustafa N., Fang, Evandro F., Fivenson, Elayne M., Tiwari, Vinod, Croteau, Deborah L., and Bohr, Vilhelm A.
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MITOCHONDRIA ,PREMATURE aging (Medicine) ,HOMEOSTASIS ,NAD (Coenzyme) ,GENETIC mutation ,DNA repair ,NEMATODE infections - Abstract
Cockayne syndrome (CS) is a rare premature aging disease, most commonly caused by mutations of the genes encoding the CSA or CSB proteins. CS patients display cachectic dwarfism and severe neurological manifestations and have an average life expectancy of 12 years. The CS proteins are involved in transcription and DNA repair, with the latter including transcription‐coupled nucleotide excision repair (TC‐NER). However, there is also evidence for mitochondrial dysfunction in CS, which likely contributes to the severe premature aging phenotype of this disease. While damaged mitochondria and impaired mitophagy were characterized in mice with CSB deficiency, such changes in the CS nematode model and CS patients are not fully known. Our cross‐species transcriptomic analysis in CS postmortem brain tissue, CS mouse, and nematode models shows that mitochondrial dysfunction is indeed a common feature in CS. Restoration of mitochondrial dysfunction through NAD+ supplementation significantly improved lifespan and healthspan in the CS nematodes, highlighting mitochondrial dysfunction as a major driver of the aging features of CS. In cerebellar samples from CS patients, we found molecular signatures of dysfunctional mitochondrial dynamics and impaired mitophagy/autophagy. In primary cells depleted for CSA or CSB, this dysfunction can be corrected with supplementation of NAD+ precursors. Our study provides support for the interconnection between major causative aging theories, DNA damage accumulation, mitochondrial dysfunction, and compromised mitophagy/autophagy. Together, these three agents contribute to an accelerated aging program that can be averted by cellular NAD+ restoration. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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25. Re‐equilibration of imbalanced NAD metabolism ameliorates the impact of telomere dysfunction.
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Sun, Chongkui, Wang, Kun, Stock, Amanda J, Gong, Yi, Demarest, Tyler G, Yang, Beimeng, Giri, Neelam, Harrington, Lea, Alter, Blanche P, Savage, Sharon A, Bohr, Vilhelm A, and Liu, Yie
- Subjects
ADP-ribosylation ,METABOLISM ,KNOCKOUT mice ,DWARFISM ,TELOMERES ,CELL growth ,CELLULAR aging ,CD38 antigen - Abstract
Short telomeres are a principal defining feature of telomere biology disorders, such as dyskeratosis congenita (DC), for which there are no effective treatments. Here, we report that primary fibroblasts from DC patients and late generation telomerase knockout mice display lower nicotinamide adenine dinucleotide (NAD) levels, and an imbalance in the NAD metabolome that includes elevated CD38 NADase and reduced poly(ADP‐ribose) polymerase and SIRT1 activities, respectively, affecting many associated biological pathways. Supplementation with the NAD precursor, nicotinamide riboside, and CD38 inhibition improved NAD homeostasis, thereby alleviating telomere damage, defective mitochondrial biosynthesis and clearance, cell growth retardation, and cellular senescence of DC fibroblasts. These findings reveal a direct, underlying role of NAD dysregulation when telomeres are short and underscore its relevance to the pathophysiology and interventions of human telomere‐driven diseases. Synopsis: Short telomeres evoke an imbalance in metabolism of the essential cofactor nicotinamide adenine dinucleotide (NAD). NAD mechanism‐based intervention mitigates NAD homeostasis and cellular defects in a telomere maintenance disorder, dyskeratosis congenita (DC). DC patient cells and late‐generation telomerase‐knockout mice display lower NAD levels.Short telomeres lead to elevated CD38 NADase and reduced poly (ADP‐ribose) polymerase and SIRT1 activities, affecting many associated biological pathways.Nicotinamide riboside (NR) supplementation or CD38 inhibition improve NAD homeostasis and ameliorate cellular consequences of telomere dysfunction in DC cells. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
26. Heterochromatin: an epigenetic point of view in aging.
- Author
-
Lee, Jong-Hyuk, Kim, Edward W., Croteau, Deborah L., and Bohr, Vilhelm A.
- Published
- 2020
- Full Text
- View/download PDF
27. Interaction between RECQL4 and OGG1 promotes repair of oxidative base lesion 8-oxoG and is regulated by SIRT1 deacetylase.
- Author
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Duan, Shunlei, Han, Xuerui, Akbari, Mansour, Croteau, Deborah L, Rasmussen, Lene Juel, and Bohr, Vilhelm A
- Published
- 2020
- Full Text
- View/download PDF
28. DNA damage invokes mitophagy through a pathway involving Spata18.
- Author
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Dan, Xiuli, Babbar, Mansi, Moore, Anthony, Wechter, Noah, Tian, Jingyan, Mohanty, Joy G, Croteau, Deborah L, and Bohr, Vilhelm A
- Published
- 2020
- Full Text
- View/download PDF
29. Biological sex and DNA repair deficiency drive Alzheimer's disease via systemic metabolic remodeling and brain mitochondrial dysfunction.
- Author
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Demarest, Tyler G., Varma, Vijay R., Estrada, Darlene, Babbar, Mansi, Basu, Sambuddha, Mahajan, Uma V., Moaddel, Ruin, Croteau, Deborah L., Thambisetty, Madhav, Mattson, Mark P., and Bohr, Vilhelm A.
- Subjects
NEUROFIBRILLARY tangles ,SEX (Biology) ,DNA repair ,ALZHEIMER'S disease ,DNA mismatch repair ,KREBS cycle ,HUMAN cell culture ,PENTOSE phosphate pathway - Abstract
Alzheimer's disease (AD) is an incurable neurodegenerative disease that is more prevalent in women. The increased risk of AD in women is not well understood. It is well established that there are sex differences in metabolism and that metabolic alterations are an early component of AD. We utilized a cross-species approach to evaluate conserved metabolic alterations in the serum and brain of human AD subjects, two AD mouse models, a human cell line, and two Caenorhabditis elegans AD strains. We found a mitochondrial complex I-specific impairment in cortical synaptic brain mitochondria in female, but not male, AD mice. In the hippocampus, Polβ haploinsufficiency caused synaptic complex I impairment in male and female mice, demonstrating the critical role of DNA repair in mitochondrial function. In non-synaptic, glial-enriched, mitochondria from the cortex and hippocampus, complex II-dependent respiration increased in female, but not male, AD mice. These results suggested a glial upregulation of fatty acid metabolism to compensate for neuronal glucose hypometabolism in AD. Using an unbiased metabolomics approach, we consistently observed evidence of systemic and brain metabolic remodeling with a shift from glucose to lipid metabolism in humans with AD, and in AD mice. We determined that this metabolic shift is necessary for cellular and organismal survival in C. elegans, and human cell culture AD models. We observed sex-specific, systemic, and brain metabolic alterations in humans with AD, and that these metabolite changes significantly correlate with amyloid and tau pathology. Among the most significant metabolite changes was the accumulation of glucose-6-phosphate in AD, an inhibitor of hexokinase and rate-limiting metabolite for the pentose phosphate pathway (PPP). Overall, we identified novel mechanisms of glycolysis inhibition, PPP, and tricarboxylic acid cycle impairment, and a neuroprotective augmentation of lipid metabolism in AD. These findings support a sex-targeted metabolism-modifying strategy to prevent and treat AD. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
30. Hippocampal tau oligomerization early in tau pathology coincides with a transient alteration of mitochondrial homeostasis and DNA repair in a mouse model of tauopathy.
- Author
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Zheng, Jin, Akbari, Mansour, Schirmer, Claire, Reynaert, Marie-Line, Loyens, Anne, Lefebvre, Bruno, Buée, Luc, Croteau, Deborah L., Galas, Marie-Christine, and Bohr, Vilhelm A.
- Subjects
MITOCHONDRIAL DNA ,TAU proteins ,DNA repair ,NEUROFIBRILLARY tangles ,TRANSGENIC mice ,DNA polymerases ,MITOCHONDRIAL proteins ,TAUOPATHIES - Abstract
Insoluble intracellular aggregation of tau proteins into filaments and neurodegeneration are histopathological hallmarks of Alzheimer disease (AD) and other tauopathies. Recently, prefibrillar, soluble, oligomeric tau intermediates have emerged as relevant pathological tau species; however, the molecular mechanisms of neuronal responses to tau oligomers are not fully understood. Here, we show that hippocampal neurons in six-month-old transgenic mouse model of tauopathy, THY-Tau22, are enriched with oligomeric tau, contain elongated mitochondria, and display cellular stress, but no overt cytotoxicity compared to the control mice. The levels of several key mitochondrial proteins were markedly different between the THY-Tau22 and control mice hippocampi including the mitochondrial SIRT3, PINK1, ANT1 and the fission protein DRP1. DNA base excision repair (BER) is the primary defense system against oxidative DNA damage and it was elevated in six-month-old transgenic mice. DNA polymerase β, the key BER DNA polymerase, was enriched in the cytoplasm of hippocampal neurons in six-month-old transgenic mice and localized with and within mitochondria. Polβ also co-localized with mitochondria in human AD brains in neurons containing oligomeric tau. Most of these altered mitochondrial and DNA repair events were specific to the transgenic mice at 6 months of age and were not different from control mice at 12 months of age when tau pathology reaches its maximum and oligomeric forms of tau are no longer detectable. In summary, our data suggests that we have identified key cellular stress responses at early stages of tau pathology to preserve neuronal integrity and to promote survival. To our knowledge, this work provides the first description of multiple stress responses involving mitochondrial homeostasis and BER early during the progression of tau pathology, and represents an important advance in the etiopathogenesis of tauopathies. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
31. Short-term NAD+ supplementation prevents hearing loss in mouse models of Cockayne syndrome.
- Author
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Okur, Mustafa N., Mao, Beatrice, Kimura, Risako, Haraczy, Scott, Fitzgerald, Tracy, Edwards-Hollingsworth, Kamren, Tian, Jane, Osmani, Wasif, Croteau, Deborah L., Kelley, Matthew W., and Bohr, Vilhelm A.
- Published
- 2020
- Full Text
- View/download PDF
32. Lamin A/C promotes DNA base excision repair.
- Author
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Maynard, Scott, Keijzers, Guido, Akbari, Mansour, Ezra, Michael Ben, Hall, Arnaldur, Morevati, Marya, Scheibye-Knudsen, Morten, Gonzalo, Susana, Bartek, Jiri, and Bohr, Vilhelm A
- Published
- 2019
- Full Text
- View/download PDF
33. Cockayne syndrome group B deficiency reduces H3K9me3 chromatin remodeler SETDB1 and exacerbates cellular aging.
- Author
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Lee, Jong-Hyuk, Demarest, Tyler G, Babbar, Mansi, Kim, Edward W, Okur, Mustafa N, De, Supriyo, Croteau, Deborah L, and Bohr, Vilhelm A
- Published
- 2019
- Full Text
- View/download PDF
34. Diminished OPA1 expression and impaired mitochondrial morphology and homeostasis in Aprataxin-deficient cells.
- Author
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Zheng, Jin, Croteau, Deborah L, Bohr, Vilhelm A, and Akbari, Mansour
- Published
- 2019
- Full Text
- View/download PDF
35. Toward understanding genomic instability, mitochondrial dysfunction and aging.
- Author
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Fakouri, Nima B., Hou, Yujun, Demarest, Tyler G., Christiansen, Louise S., Okur, Mustafa N., Mohanty, Joy G., Croteau, Deborah L., and Bohr, Vilhelm A.
- Subjects
ADENOSINE diphosphate ,DNA damage ,CELLULAR aging ,CELL physiology - Abstract
The biology of aging is an area of intense research, and many questions remain about how and why cell and organismal functions decline over time. In mammalian cells, genomic instability and mitochondrial dysfunction are thought to be among the primary drivers of cellular aging. This review focuses on the interrelationship between genomic instability and mitochondrial dysfunction in mammalian cells and its relevance to age‐related functional decline at the molecular and cellular level. The importance of oxidative stress and key DNA damage response pathways in cellular aging is discussed, with a special focus on poly (ADP‐ribose) polymerase 1, whose persistent activation depletes cellular energy reserves, leading to mitochondrial dysfunction, loss of energy homeostasis, and altered cellular metabolism. Elucidation of the relationship between genomic instability, mitochondrial dysfunction, and the signaling pathways that connect these pathways/processes are keys to the future of research on human aging. An important component of mitochondrial health preservation is mitophagy, and this and other areas that are particularly ripe for future investigation will be discussed. Persistence of DNA damage negatively affects mitophagy through NAD+‐SIRT1–AMPK pathway. DNA damage response activates signaling pathways that negatively affect mitophagy including PARP1 activation followed by NAD+ and ATP depletion. A decrease in NAD+ and an increase in AMP shifts the mitochondrial balance toward increased mitochondrial activity and decrease in mitophagy. Increased mitochondrial activity is associated with increased ROS production that can damage cellular components and promotes cell death. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
36. A high-throughput screen to identify novel small molecule inhibitors of the Werner Syndrome Helicase-Nuclease (WRN).
- Author
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Sommers, Joshua A., Kulikowicz, Tomasz, Croteau, Deborah L., Dexheimer, Thomas, Dorjsuren, Dorjbal, Jadhav, Ajit, Maloney, David J., Simeonov, Anton, Bohr, Vilhelm A., and Jr.Brosh, Robert M.
- Subjects
SMALL molecules ,WERNER'S syndrome ,DNA helicases ,DNA replication ,CANCER treatment - Abstract
Werner syndrome (WS), an autosomal recessive genetic disorder, displays accelerated clinical symptoms of aging leading to a mean lifespan less than 50 years. The WS helicase-nuclease (WRN) is involved in many important pathways including DNA replication, recombination and repair. Replicating cells are dependent on helicase activity, leading to the pursuit of human helicases as potential therapeutic targets for cancer treatment. Small molecule inhibitors of DNA helicases can be used to induce synthetic lethality, which attempts to target helicase-dependent compensatory DNA repair pathways in tumor cells that are already genetically deficient in a specific pathway of DNA repair. Alternatively, helicase inhibitors may be useful as tools to study the specialized roles of helicases in replication and DNA repair. In this study, approximately 350,000 small molecules were screened based on their ability to inhibit duplex DNA unwinding by a catalytically active WRN helicase domain fragment in a high-throughput fluorometric assay to discover new non-covalent small molecule inhibitors of the WRN helicase. Select compounds were screened to exclude ones that inhibited DNA unwinding by other helicases in the screen, bound non-specifically to DNA, acted as irreversible inhibitors, or possessed unfavorable chemical properties. Several compounds were tested for their ability to impair proliferation of cultured tumor cells. We observed that two of the newly identified WRN helicase inhibitors inhibited proliferation of cancer cells in a lineage-dependent manner. These studies represent the first high-throughput screen for WRN helicase inhibitors and the results have implications for anti-cancer strategies targeting WRN in different cancer cells and genetic backgrounds. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
37. NAD+ Metabolism in Aging and Cancer.
- Author
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Demarest, Tyler G., Babbar, Mansi, Okur, Mustafa N., Xiuli Dan, Croteau, Deborah L., Fakouri, Nima B., Mattson, Mark P., and Bohr, Vilhelm A.
- Published
- 2019
- Full Text
- View/download PDF
38. Regulation of the Intranuclear Distribution of the Cockayne Syndrome Proteins.
- Author
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Iyama, Teruaki, Okur, Mustafa N., Golato, Tyler, McNeill, Daniel R., Lu, Huiming, Hamilton, Royce, Raja, Aishwarya, Bohr, Vilhelm A., and Wilson III, David M.
- Published
- 2018
- Full Text
- View/download PDF
39. Multiple RPAs make WRN syndrome protein a superhelicase.
- Author
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Lee, Mina, Shin, Soochul, Uhm, Heesoo, Hong, Heesun, Kirk, Jaewon, Hyun, Kwangbeom, Kulikowicz, Tomasz, Kim, Jaehoon, Ahn, Byungchan, and Bohr, Vilhelm A
- Published
- 2018
- Full Text
- View/download PDF
40. NAD+ supplementation normalizes key Alzheimer's features and DNA damage responses in a new AD mouse model with introduced DNA repair deficiency.
- Author
-
Yujun Hou, Cordonnier, Stephanie, Croteau, Deborah L., Zavala, Eduardo, Baptiste, Beverly A., Lautrup, Sofie, Bohr, Vilhelm A., Stevnsner, Tinna V., Yue Wang, Mattson, Mark P., Yongqing Zhang, Moritoh, Kanako, and ÓConnell, Jennifer F.
- Subjects
ALZHEIMER'S disease ,ALZHEIMER'S disease diagnosis ,ALZHEIMER'S disease treatment ,ALZHEIMER'S disease research ,DNA repair ,NICOTINAMIDE - Abstract
Emerging findings suggest that compromised cellular bioenergetics and DNA repair contribute to the pathogenesis of Alzheimer's disease (AD), but their role in disease-defining pathology is unclear. We developed a DNA repair-deficient 3XTgAD/Polβ
+/- mouse that exacerbates major features of human AD including phosphorylated Tau (pTau) pathologies, synaptic dysfunction, neuronal death, and cognitive impairment. Here we report that 3xTgAD/Polβ+/- mice have a reduced cerebral NAD+/NADH ratio indicating impaired cerebral energy metabolism, which is normalized by nicotinamide riboside (NR) treatment. NR lessened pTau pathology in both 3xTgAD and 3xTgAD/Polβ+/- mice but had no impact on amyloid β peptide (Aβ) accumulation. NR-treated 3xTgAD/Polβ+/- mice exhibited reduced DNA damage, neuroinflammation and apoptosis of hippocampal neurons and increased activity of SIRT3 in the brain. NR improved cognitive function in multiple behavioral tests and restored hippocampal synaptic plasticity in 3xTgAD mice and 3XTgAD/Polβ+/-mice. In general, the deficits between genotypes and the benefits of NR were greater in 3XTgAD/Polβ+/- mice than in 3XTgAD mice. Our findings suggest a pivotal role for cellular NAD+ depletion upstream of neuroinflammation, pTau, DNA damage, synaptic dysfunction, and neuronal degeneration in AD. Interventions that bolster neuronal NAD+ levels therefore have therapeutic potential for AD. [ABSTRACT FROM AUTHOR]- Published
- 2018
- Full Text
- View/download PDF
41. Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.
- Author
-
Huiming Lu, Shamanna, Raghavendra A., de Freitas, Jessica K., Okur, Mustafa, Khadka, Prabhat, Kulikowicz, Tomasz, Holland, Priscella P., Jane Tian, Croteau, Deborah L., Davis, Anthony J., and Bohr, Vilhelm A.
- Subjects
DOUBLE-strand DNA breaks ,DNA helicases ,SINGLE-stranded DNA ,UBIQUITINATION ,PHOSPHORYLATION ,IONIZING radiation - Abstract
Pathway choice within DNA double-strand break (DSB) repair is a tightly regulated process to maintain genome integrity. RECQL4, deficient in Rothmund-Thomson Syndrome, promotes the two major DSB repair pathways, non-homologous end joining (NHEJ) and homologous recombination (HR). Here we report that RECQL4 promotes and coordinates NHEJ and HR in different cell cycle phases. RECQL4 interacts with Ku70 to promote NHEJ in G1 when overall cyclin-dependent kinase (CDK) activity is low. During S/G2 phases, CDK1 and CDK2 (CDK1/ 2) phosphorylate RECQL4 on serines 89 and 251, enhancing MRE11/RECQL4 interaction and RECQL4 recruitment to DSBs. After phosphorylation, RECQL4 is ubiquitinated by the DDB1- CUL4A E3 ubiquitin ligase, which facilitates its accumulation at DSBs. Phosphorylation of RECQL4 stimulates its helicase activity, promotes DNA end resection, increases HR and cell survival after ionizing radiation, and prevents cellular senescence. Collectively, we propose that RECQL4 modulates the pathway choice of NHEJ and HR in a cell cycle-dependent manner. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
42. The Identification of a SIRT6 Activator from Brown Algae Fucus distichus.
- Author
-
Rahnasto-Rilla, Minna K., McLoughlin, Padraig, Kulikowicz, Tomasz, Doyle, Maire, Bohr, Vilhelm A., Lahtela-Kakkonen, Maija, Ferrucci, Luigi, Hayes, Maria, and Moaddel, Ruin
- Abstract
Brown seaweeds contain many bioactive compounds, including polyphenols, polysaccharides, fucosterol, and fucoxantin. These compounds have several biological activities, including anti-inflammatory, hepatoprotective, anti-tumor, anti-hypertensive, and anti-diabetic activity, although in most cases their mechanisms of action are not understood. In this study, extracts generated from five brown algae (Fucus dichitus, Fucus vesiculosus (Linnaeus), Cytoseira tamariscofolia, Cytoseira nodacaulis, Alaria esculenta) were tested for their ability to activate SIRT6 resulting in H3K9 deacetylation. Three of the five macroalgal extracts caused a significant increase of H3K9 deacetylation, and the effect was most pronounced for F. dichitus. The compound responsible for this in vitro activity was identified by mass spectrometry as fucoidan. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
43. NAP1L1 accelerates activation and decreases pausing to enhance nucleosome remodeling by CSB.
- Author
-
Ju Yeon Lee, Lake, Robert J., Jaewon Kirk, Bohr, Vilhelm A., Hua-Ying Fan, and Sungchul Hohng
- Published
- 2017
- Full Text
- View/download PDF
44. DNA polymerase β decrement triggers death of olfactory bulb cells and impairs olfaction in a mouse model of Alzheimer's disease.
- Author
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Misiak, Magdalena, Vergara Greeno, Rebeca, Baptiste, Beverly A., Sykora, Peter, Liu, Dong, Cordonnier, Stephanie, Fang, Evandro F., Croteau, Deborah L., Mattson, Mark P., and Bohr, Vilhelm A.
- Subjects
ALZHEIMER'S disease ,DNA polymerases ,OLFACTORY receptors ,NEURODEGENERATION ,DNA repair ,DNA damage ,HISTOPATHOLOGY ,DEVELOPMENTAL neurobiology - Abstract
Alzheimer's disease (AD) involves the progressive degeneration of neurons critical for learning and memory. In addition, patients with AD typically exhibit impaired olfaction associated with neuronal degeneration in the olfactory bulb (OB). Because DNA base excision repair (BER) is reduced in brain cells during normal aging and AD, we determined whether inefficient BER due to reduced DNA polymerase-β (Polβ) levels renders OB neurons vulnerable to degeneration in the 3xTgAD mouse model of AD. We interrogated OB histopathology and olfactory function in wild-type and 3xTgAD mice with normal or reduced Polβ levels. Compared to wild-type control mice, Polβ heterozygous (Polβ
+/− ), and 3xTgAD mice, 3xTgAD/Polβ+/− mice exhibited impaired performance in a buried food test of olfaction. Polβ deficiency did not affect the proliferation of OB neural progenitor cells in the subventricular zone. However, numbers of newly generated neurons were reduced by approximately 25% in Polβ+/− and 3xTgAD mice, and by over 60% in the 3xTgAD/Polβ+/− mice compared to wild-type control mice. Analyses of DNA damage and apoptosis revealed significantly greater degeneration of OB neurons in 3xTgAD/Polβ+/− mice compared to 3xTgAD mice. Levels of amyloid β-peptide (Aβ) accumulation in the OB were similar in 3xTgAD and 3xTgAD/Polβ+/− mice, and cultured Polβ-deficient neurons exhibited increased vulnerability to Aβ-induced death. Olfactory deficit is an early sign in human AD, but the mechanism is not yet understood. Our findings in a new AD mouse model demonstrate that diminution of BER can endanger OB neurons, and suggest a mechanism underlying early olfactory impairment in AD. [ABSTRACT FROM AUTHOR]- Published
- 2017
- Full Text
- View/download PDF
45. Worldwide Studies on Cockayne Syndrome are Needed.
- Author
-
Bohr, Vilhelm and Bohr, Vilhelm A
- Subjects
SYNDROMES ,PREMATURE aging (Medicine) ,HEARING disorders - Abstract
Clinical and mutation spectra of Cockayne syndrome in India.[[1]] Cockayne syndrome (CS) is a rare, neurodegenerative disease associated with cachectic dwarfism, visual and hearing problems, retarded growth and many other features.[[2]] The classic clinical study was Nance and Berry, 1992[[3]], and there have been several since. CS has two genotypes, CSA and CSB, and the clinical features of these two complementation groups are similar, although CSA is usually less severe. [Extracted from the article]
- Published
- 2021
- Full Text
- View/download PDF
46. JNK Phosphorylates SIRT6 to Stimulate DNA Double-Strand Break Repair in Response to Oxidative Stress by Recruiting PARP1 to DNA Breaks.
- Author
-
Van Meter, Michael, Simon, Matthew, Tombline, Gregory, May, Alfred, Morello, Timothy D., Hubbard, Basil P., Bredbenner, Katie, Park, Rosa, Sinclair, David A., Bohr, Vilhelm A., Gorbunova, Vera, and Seluanov, Andrei
- Abstract
Summary The accumulation of damage caused by oxidative stress has been linked to aging and to the etiology of numerous age-related diseases. The longevity gene, sirtuin 6 (SIRT6), promotes genome stability by facilitating DNA repair, especially under oxidative stress conditions. Here we uncover the mechanism by which SIRT6 is activated by oxidative stress to promote DNA double-strand break (DSB) repair. We show that the stress-activated protein kinase, c-Jun N-terminal kinase (JNK), phosphorylates SIRT6 on serine 10 in response to oxidative stress. This post-translational modification facilitates the mobilization of SIRT6 to DNA damage sites and is required for efficient recruitment of poly (ADP-ribose) polymerase 1 (PARP1) to DNA break sites and for efficient repair of DSBs. Our results demonstrate a post-translational mechanism regulating SIRT6, and they provide the link between oxidative stress signaling and DNA repair pathways that may be critical for hormetic response and longevity assurance. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
47. Single-molecule imaging reveals a common mechanism shared by G-quadruplex-resolving helicases.
- Author
-
Tippana, Ramreddy, Helen Hwang, Opresko, Patricia L., Bohr, Vilhelm A., and Sua Myong
- Subjects
SINGLE molecules ,IMAGING systems ,OPTOELECTRONIC devices ,QUADRUPLEX nucleic acids ,HELICASES - Abstract
G-quadruplex (GQ) is a four stranded DNA secondary structure that arises from a guanine rich sequence. Stable formation of GQ in genomic DNA can be counteracted by the resolving activity of specialized helicases including RNA helicase AU (associated with AU rich elements) (RHAU) (G4 resolvase 1), Bloom helicase (BLM), and Werner helicase (WRN). However, their substrate specificity and the mechanism involved in GQ unfolding remain uncertain. Here, we report that RHAU, BLM, and WRN exhibit distinct GQ conformation specificity, but use a common mechanism of repetitive unfolding that leads to disrupting GQ structure multiple times in succession. Such unfolding activity of RHAU leads to efficient annealing exclusively within the same DNA molecule. The same resolving activity is sufficient to dislodge a stably bound GQ ligand, including BRACO-19, NMM, and Phen-DC3. Our study demonstrates a plausible biological scheme where different helicases are delegated to resolve specific GQ structures by using a common repetitive unfolding mechanism that provides a robust resolving power. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
48. RECQL4 Promotes DNA End Resection in Repair of DNA Double-Strand Breaks.
- Author
-
Lu, Huiming, Shamanna, Raghavendra A., Keijzers, Guido, Anand, Roopesh, Rasmussen, Lene Juel, Cejka, Petr, Croteau, Deborah L., and Bohr, Vilhelm A.
- Abstract
Summary The RecQ helicase RECQL4, mutated in Rothmund-Thomson syndrome, regulates genome stability, aging, and cancer. Here, we identify a crucial role for RECQL4 in DNA end resection, which is the initial and an essential step of homologous recombination (HR)-dependent DNA double-strand break repair (DSBR). Depletion of RECQL4 severely reduces HR-mediated repair and 5′ end resection in vivo. RECQL4 physically interacts with MRE11-RAD50-NBS1 (MRN), which senses DSBs and initiates DNA end resection with CtIP. The MRE11 exonuclease regulates the retention of RECQL4 at laser-induced DSBs. RECQL4 also directly interacts with CtIP via its N-terminal domain and promotes CtIP recruitment to the MRN complex at DSBs. Moreover, inactivation of RECQL4’s helicase activity impairs DNA end processing and HR-dependent DSBR without affecting its interaction with MRE11 and CtIP, suggesting an important role for RECQL4’s unwinding activity in the process. Thus, we report that RECQL4 is an important participant in HR-dependent DSBR. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
49. RECQL4 helicase has oncogenic potential in sporadic breast cancers.
- Author
-
Arora, Arvind, Agarwal, Devika, Abdel‐Fatah, Tarek MA, Lu, Huiming, Croteau, Deborah L, Moseley, Paul, Aleskandarany, Mohammed A, Green, Andrew R, Ball, Graham, Rakha, Emad A, Chan, Stephen YT, Ellis, Ian O, Wang, Lisa L, Zhao, Yongliang, Balajee, Adayabalam S, Bohr, Vilhelm A, and Madhusudan, Srinivasan
- Abstract
RECQL4 helicase is a molecular motor that unwinds DNA, a process essential during DNA replication and DNA repair. Germ-line mutations in RECQL4 cause type II Rothmund-Thomson syndrome ( RTS), characterized by a premature ageing phenotype and cancer predisposition. RECQL4 is widely considered to be a tumour suppressor, although its role in human breast cancer is largely unknown. As the RECQL4 gene is localized to chromosome 8q24, a site frequently amplified in sporadic breast cancers, we hypothesized that it may play an oncogenic role in breast tumourigenesis. To address this, we analysed large cohorts for gene copy number changes ( n = 1977), mRNA expression ( n = 1977) and protein level ( n = 1902). Breast cancer incidence was also explored in 58 patients with type II RTS. DNA replication dynamics and chemosensitivity was evaluated in RECQL4-depleted breast cancer cells in vitro. Amplification or gain in gene copy number (30.6%), high-level mRNA expression (51%) and high levels of protein (23%) significantly associated with aggressive tumour behaviour, including lymph node positivity, larger tumour size, HER2 overexpression, ER-negativity, triple-negative phenotypes and poor survival. RECQL4 depletion impaired the DNA replication rate and increased chemosensitivity in cultured breast cancer cells. Thus, although recognized as a 'safe guardian of the genome', our data provide compelling evidence that RECQL4 is tumour promoting in established breast cancers. Copyright © 2015 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
50. Clinicopathological and prognostic significance of RECQL5 helicase expression in breast cancers.
- Author
-
Arora, Arvind, Abdel-Fatah, Tarek M. A., Agarwal, Devika, Doherty, Rachel, Croteau, Deborah L., Moseley, Paul M., Hameed, Khalid, Green, Andrew, Aleskandarany, Mohammed A., Rakha, Emad A., Patterson, Karl, Ball, Graham, Chan, Stephen Y. T., Ellis, Ian O., Bohr, Vilhelm A., Bryant, Helen E., and Madhusudan, Srinivasan
- Subjects
BREAST cancer prognosis ,HELICASES ,PROTEIN expression ,GENETIC recombination ,DNA repair ,MESSENGER RNA - Abstract
RECQL5 is a member of the RecQ family of DNA helicases and has key roles in homologous recombination, base excision repair, replication and transcription. The clinicopathological significance of RECQL5 expression in breast cancer is unknown. In this study, we have evaluated RECQL5 mRNA expression in 1977 breast cancers, and RECQL5 protein level in 1902 breast cancers [Nottingham Tenovus series (n = 1650) and ER- cohort (n = 252)]. Expression levels were correlated to aggressive phenotypes and survival outcomes. High RECQL5 mRNA expression was significantly associated with high histological grade (P = 0.007), HER2 overexpression (P = 0.032), ER+/HER2-/high proliferation genefu subtype (P < 0.0001), integrative molecular clusters (intClust 1and 9) (P < 0.0001) and poor survival (P < 0.0001). In subgroup analysis, high RECQL5 mRNA level remains significantly associated with poor BCSS in ER+ cohort (P < 0.0001) but not in ER- cohort (P = 0.116). At the protein level, in tumours with low RAD51, high RECQL5 level was significantly associated with high histological grade (P < 0.0001), higher mitotic index (P = 0.008), dedifferentiation (P = 0.025), pleomorphism (P = 0.027) and poor survival (P = 0.003). In subgroup analysis, high RECQL5/low RAD51 remains significantly associated with poor BCSS in ER+ cohort (P = 0.010), but not in ER- cohort (P = 0.628). In multivariate analysis, high RECQL5 mRNA and high RECQL5/low RAD51 nuclear protein coexpression independently influenced survival (P = 0.022) in whole cohort and in the ER+ subgroup. Preclinically, we show that exogenous expression of RECQL5 in MCF10A cells can drive proliferation supporting an oncogenic function for RECQL5 in breast cancer. We conclude that RECQL5 is a promising biomarker in breast cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
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