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The River Ganga produces a substantial amount of its fish from small native species, defined here as those with a maximum length of 25 cm. The FiSAT program was utilized to estimate stock assessments of four important small indigenous species from the River Ganga: Johnius coitor, Cabdio morar, Salmostoma bacaila, and Gudusia chapra. Fish samples were collected monthly for a year (April 2020–May 2021) from four predetermined sampling sites along the River Ganga (Farakka, Berhampore, Balagarh, and Tribeni) in West Bengal, India. The estimated exploitation rate for Johnius coitor, Salmostoma bacaila, and Gudusia chapra was relatively lower than the optimum level of 0.5 and considerably lower than Emax values, indicating that their stocks are experiencing low fishing pressure in the region. The FiSAT results indicated that the species Cabdio morar was found to be heavily exploited. The total mortality (Z), natural mortality (M), and fishing mortality (F) rates for all four of the SIF species were examined, and they were contrasted with data from previous studies. On the lower stretch of the River Ganga, all of the fish stocks are optimally exploited (Eopt), except for the species Cabdio morar. The population dynamics of all of the species have been described for the first time on the lower stretch of the River Ganga. According to the findings, all of the fish stocks throughout the lower stretch of River Ganga are optimally exploited (Eopt), except for Cabdio morar. The study also emphasizes the importance of increasing sustainable fishing efforts, focusing on SIFs throughout the lower stretch of the River Ganga in order to safeguard the livelihood and nutritional status of fishermen. [ABSTRACT FROM AUTHOR]

Fish in the Volga-Kama River System (the largest river system in Europe) are important as a crucial food source for local populations; fish have the highest trophic level among hydrobionts. The purpose of this research is to describe the diversity of non-indigenous and native fish in the Volga and Kama Rivers, in the European part of Russia. This dataset encompasses data from June 2001 to September 2021 and comprises 1888 records (36,376 individual observations) for littoral and pelagic habitats from 143 sampling sites, representing 52 species from 42 genera in 22 families. The dataset has a Darwin Core standard format and has been fully released in the Global Biodiversity Information Facility (GBIF) under CC-BY 4.0 International license. The data are validated with several international databases such as FishBase, Eschmeyer's Catalog of Fishes, the Barcode of Life Data System, and the SAS.Planet geoinformations system. Newly established populations have been found for several species belonging to the following Actinopteri families: Alosidae, Anguillidae, Cichlidae, Ehiravidae, Gobiidae, Odontobutidae, Syngnathidae, and Xenocyprididae. Therefore, this dataset can be used in the particular taxon species distribution analysis, which are especially important for non-indigenous species. Data set: https://doi.org/10.15468/n8gv7y Dataset License: Creative Commons Attribution (CC-BY) 4.0 International License [ABSTRACT FROM AUTHOR]

Simple Summary: The Nile tilapia (Oreochromis niloticus) (NT) is an aggressive and omnivorous species that competes with native fishes for food resources, and it has successfully invaded much of the Pearl River basin in China. Intensive research has focused on the gut microbiota of Nile tilapia in artificial culture. However, differences in gut microbes between invasive Nile tilapia and indigenous fish are relatively less well characterized. In the present study, we chose the black Amur bream (Megalobrama terminalis) as a native omnivorous fish that shared a common habitat and partially overlapped resource usage with Nile tilapia. Here, we investigated the gut microbiomes of invasive Nile tilapia and indigenous black Amur bream (BA) in the same river section using high-throughput 16S rRNA gene sequencing. The results indicated that the gut microbiome of NT had several special characteristics, e.g., higher alpha diversity and greater niche breadth, compared with the bream. Thus, the aim of the present study was to investigate the role of gut microbiomes between an indigenous fish (black Amur bream) and invasive Nile tilapia from the low region of the Pearl River basin to better understand the microbial complexity and diversity of their gut microbiota. The gut microbiome is thought to play vital roles in host fitness and local adaptation to new environments, thereby facilitating the invasion of the host species. The Nile tilapia (Oreochromis niloticus) (NT) is an aggressive and omnivorous species that competes with native fishes for food resources, and it has successfully invaded much of the Pearl River basin in China. Here, we investigated the gut microbiomes of invasive Nile tilapia and indigenous black Amur bream (BA) in the same river section using high-throughput 16S rRNA gene sequencing. The results indicated that the gut microbiome of NT had several special characteristics, e.g., higher alpha diversity and greater niche breadth, compared with the bream. The gut microbiota of the small size of Nile tilapia (NTS) and small size of black Amur bream (BAS) groups were dominated by Proteobacteria, while those of the NTS and large size of Nile tilapia (NTL) and BAS and large size of black Amur bream (BAL). BAL and NTL were characterized by Firmicutes and Fusobacteriota, respectively. We found that Pseudomonas, Cetobacterium, Ralstonia, and Romboutsia were biomarkers of the NTS, NTL, BAS, and BAL groups, respectively. Moreover, the results collectively suggested that the clustering coefficients of BAL and NTL networks were greater than those of BAS and NTS networks, and BAS had the smallest network among the four groups. Positive interactions between two ASVs dominated the BAS, NTS, and NTL networks, while the proportion of negative interactions between two ASVs in the BAL network was remarkably increased. Low levels of interspecies competition in the NT gut microbiome would contribute to high diversity in the dietary niches and would also benefit the survival and local adaptation of the host. Our results identified specific biomarkers of gut microbial species in invasive Nile tilapia and provided useful information concerning how to monitor and manage invasive Nile tilapia populations. [ABSTRACT FROM AUTHOR]

Peoples can readily and affordably obtain small indigenous fish species (SIS), with a maximum length of 25 cm, that can be found in niches in small bodies of water (such as canals, ponds, wetlands, streams, etc.). SIS contribute valuable and significant macro- and micronutrients in Bangladesh. SIS are excellent suppliers of vitamins and minerals. The main micronutrients are copper, iodine, iron, selenium, chromium, and zinc, which can help prevent mineral deficiency and enzymatic response in the human body. SIS, such as the mola (Amblypharyngodon mola), cotio (Osteobrama cotio), darkina (Esomus danricus), etc., are easily digestible by the human gut. Nutrients of these fish are quickly accessible by the intestine. These fish are comparatively cheap and easy to capture and promote the presence of particular vitamins in SIS, including A, D, E, and K, as well as vitamin B components. This review paper focuses on the SIS nutritional contribution and their efficacy of preventing malnutrition in developing countries such as Bangladesh and the whole world. [ABSTRACT FROM AUTHOR]

In order to investigate the influence of the high-altitude aquatic environment on indigenous fish metabolites, metabolomics studies were applied in this study. Widespread throughout the main stem of the Nujiang River of Schizothorax nukiangensis, we established sampling sites at high (3890 m) and low (2100 m) altitudes and selected six S. nukiangensis at each location, each weighing approximately 150 g and looking healthy. Then, metabolomics analysis was performed to compare the various metabolites of the two groups. Low concentrations of amino acids, dipeptides, eicosapentaenoic acid, docosahexaenoic acid, pentadecanoic acid, Thioetheramide-PC, 1,2-dioleoyl-sn-glycero-3-phosphatidylcholine, 1-Stearoyl-sn-glycerol-3-phosphocholine, 1-Myristoyl-sn-glycero-3-phosphocholine and 1-Palmitoyl-sn-glycero-3-phosphocholine, high concentrations in S-Methyl-5'-thioadenosine, creatine, D-mannose-6-phosphate, D-mannose-1-phosphate, oleic acid and myristoleic acid were found in high-altitude fish liver. These differentially accumulated metabolites were involved in oxidative stress, energy metabolism, carbohydrate metabolism and lipid metabolism. mTOR signaling pathway, apoptosis and lysosome were the KEGG pathways that were enriched between different groups to ensure energy supply and limit tissue damage of fish at high altitudes. All these results contributed to the understanding of the high-altitude adaptation of S. nukiangensis in the Nujiang River. Nicotine and methoprene, two organic pollutants, performed differently in fish at different altitudes. Overall, our findings advanced the fundamental understanding of fish responses to high-altitude environments, adaptive mechanisms and organic contaminants pollution in the Nujiang River. [ABSTRACT FROM AUTHOR]

Simple Summary: The appearance of a species outside its native area due to human activities (e.g., canal openings, shipping, aquaculture) is described as a biological invasion, and these species are called non-indigenous. The Mediterranean Sea is prone to such an invasion, which is further enhanced by water temperature rising. Moreover, species from the Atlantic further expand their distribution in the Mediterranean, called neonative species, entering through the Gibraltar. Here, we examined the biological traits (e.g., preferred habitat and temperature, length, feeding habits) of fishes present in the Mediterranean Sea, as well as those from the neighboring Atlantic and Red Sea areas, and those that are neonative and non-indigenous in the Mediterranean. We applied state-of-the-art statistical analyses, aiming to describe their biological traits and spot those that could serve as predictors of species that could become neonative and non-indigenous for the Mediterranean. Overall, the results presented here could serve as a baseline for future research, and provide us with a useful tool to plan in advance measures for the protection of native Mediterranean fishes from such invasions. The Mediterranean Sea (MED) is prone to species' introductions, induced by human activities and/or climate change. Recent studies focus on the biological traits that result in such introductions, yet on a single-area-type approach. Here, we used, analyzed, and compared biological traits derived from FishBase for MED, non-indigenous (NIS) and neonative (NEO) in the Mediterranean, and adjacent Atlantic (ATL) and Red Sea (RS) species. A quantitative trait-based analysis was performed using random forest to determine the importance of traits in the successful establishment in the Mediterranean. MED fishes were mainly demersal, slow growing and small-medium sized, preferring intermediate temperatures. Conversely, ATL were mainly deep-dwelling species, preferring low temperatures. RS and NIS were predominantly reef-associated, thermophilus, and stenothermic. NEO species were stenothermic with preference to intermediate-high temperatures. Omnivores with preference to animals was the most common trophic group among regions. MED species exhibited higher phylogenetic uniqueness (PD50) compared to RS and NIS, indicating that they have long ancestral branches and few descendants. Preferred temperature, habitat type preference and maximum reported length (Lmax) and infinite length (Linf) were the most important predictors in the establishment process. Overall, the results presented here could serve as a baseline for future research, especially by using more refined and/or additional biological trail estimates. [ABSTRACT FROM AUTHOR]

Simple Summary: Fish is an important source of nutritious fatty acids, which are necessary for the prevention of cardiovascular and neurological diseases. Many fish species are a major component of the human diet, especially for indigenous peoples from Siberia, Russia, but information about their fatty acid profiles is scarce. We studied the fatty acid content of four salmonid fish (Arctic cisco, least cisco, muksun, and Arctic charr) inhabiting water bodies of the Gydan Peninsula, Kara Sea basin. We found a high content of essential polyunsaturated fatty acids in local salmonid fishes. Arctic charr was the fish species with the highest concentration of fatty acids in the flesh. The results of our multivariate analysis may be useful for anglers, stakeholders, and local consumers. We assayed fatty acids in the flesh of Arctic cisco Coregonus autumnalis (adult and juvenile), least cisco Coregonus sardinella, muksun Coregonus muksun, and Arctic charr Salvelinus alpinus inhabiting water bodies of the Gydan Peninsula, Siberia, Russia. The highest concentrations of total and polyunsaturated fatty acids (PUFAs) were found in Arctic charr (27.8 and 9.5 mg g−1) and adult Arctic cisco (20.2 and 7.6 mg g−1), while the lowest concentrations occurred in juvenile Arctic cisco (7.5 and 3.6 mg g−1). Multivariate analyses divided all studied fish into five distinct groups with the highest similarity between least cisco and muksun and the highest dissimilarity between juvenile Arctic cisco and Arctic charr. Coregonid fish from the study area had a higher content of docosahexaenoic and eicosapentaenoic acids than their conspecifics from subarctic and temperate habitats. The flesh of the studied fish is a source of a healthy diet for humans. Taking into account that all the studied fish are components of the traditional diet of indigenous peoples in northwestern Siberia, our data may be useful not only for local consumers and anglers but also for stakeholders focused on food policy and food security in the area. [ABSTRACT FROM AUTHOR]

Human alterations, such as hydropower development, are intensive and have negative impacts on fish and ecological environment. However, fish habitat restoration projects based on geographical morphology have not yet been reported in the Yangtze River. To explore engineering measures used to restore fish habitat structure and function, a mesoscale fish habitat restoration project was designed and constructed, which included restructuring of habitat topography in the fluctuating area. Three-dimensional computational fluid dynamics (CFD) models were used to simulate and predict the project's effect on the hydromorphology prior to construction, and an Acoustic Doppler current profiler (ADCP) was deployed to test and verify actual flow field improvement. Short-term effects on fish species sorting and their main ecological traits were examined. The results showed that vorticity and flow heterogeneity in the river reach increased, suggesting that the restoration projects created flow conditions favourable to indigenous fishes. Thus, pre-optimization using computer simulation is an essential and scientific procedure that could be used to increase the probability of river restoration success. The promotion of habitat diversity had strong effects on fish aggregation, especially for the rare and endemic fish species targeted. Fish abundance, catch biomass and species richness increased by 98.1%, 62.7% and 22.5%, respectively. There were significant differences (p < 0.05) in species number and catch abundance before and after the project. The number of rare and endemic fish species increased from four to nine species. Overall, this research provides evidence that the promotion of habitat hydraulic morphology heterogeneity accelerates the recovery of fish diversity and biomass. [ABSTRACT FROM AUTHOR]

Featured Application: The study highlights the utility of using histopathological alterations in gills of an indigenous fish species (common bream) in differentiating seasonal variations in water quality. The methodology displayed in this study can be used to obtain more compelling and comprehensive environmental monitoring programs. Histopathological alterations in various fish organs have a pronounced value in aquatic toxicology and are widely used in environmental monitoring. The aim of this study was to evaluate whether histopathological alterations in fish gills can discriminate seasonal variations in environmental conditions within the same aquatic ecosystem, and if so, which alterations contributed the most to seasonal differentiation. Microscopic examination of common bream Abramis brama gills displayed various alterations in gill structure, including epithelial hypertrophy, hyperplasia, mucous and chloride cell alterations, epithelial lifting, necrosis, hyperemia and aneurism. These alterations were subsequently quantified by a semi-quantitative analysis in order to detect differences in the intensity of the mentioned alterations. Epithelial hypertrophy, hyperplasia, epithelial lifting and necrosis varied significantly between seasons with only necrosis being significantly higher in the first season. Discriminant canonical analysis displayed that epithelial hyperplasia, mucous cell alterations, epithelial lifting and necrosis contributed the most to discrimination between seasons. Overall, this study demonstrates that histopathological biomarkers in fish gills can be used in discriminating seasonal variations in water quality within the same aquatic ecosystem. [ABSTRACT FROM AUTHOR]

Alien fish introductions, conducted towards the ichthyofauna enhancement in local drainages, have been occasionally proved harmful for the indigenous freshwater fish populations. The present study was designed to assess the impact of stocking activities, carried out in the past decades with fingerlings originating from Acheloos river hatcheries, on the native trout (Salmo sp.) populations of Nestos River, Greece. Trout specimens collected from several tributaries of Nestos River and were analyzed by means of PCR-RFLP and sequencing targeting the mitochondrial ND5-ND6 genes and the entire control region, respectively. It should be mentioned that trouts from Acheloos mainly belong to the marmoratus mitochondrial DNA (mtDNA) lineage, while the autochthonous trouts from Nestos belong to the Adriatic lineage. Both methodologies demonstrated that most samples from the three tributaries located at the lower part of Nestos constitute offspring of the fingerlings transferred from Acheloos hatcheries. Therefore, these tributaries have been strongly affected by stocking activities with a potential complete loss of their autochthonous trout. On the other hand, it seems that trout populations from higher altitude tributaries have not been affected by stockings. Hence, efforts should be undertaken in order to prevent the prevalence of the non-indigenous translocated Salmo in higher altitude tributaries, in conjunction with a management plan designed for the total trout populations from the area, speaking of which it has been recently included to the National Park of Rodopi Mountains. [ABSTRACT FROM AUTHOR]

This study developed niche models for the native ranges of Oreochromis andersonii, O. mortimeri, and O. mossambicus, and assessed how much of their range is climatically suitable for the establishment of O. niloticus, and then reviewed the conservation implications for indigenous congenerics as a result of overlap with O. niloticus based on documented congeneric interactions. The predicted potential geographical range of O. niloticus reveals a broad climatic suitability over most of southern Africa and overlaps with all the endemic congenerics. This is of major conservation concern because six of the eight river systems predicted to be suitable for O. niloticus have already been invaded and now support established populations. Oreochromis niloticus has been implicated in reducing the abundance of indigenous species through competitive exclusion and hybridisation. Despite these well-documented adverse ecological effects, O. niloticus remains one of the most widely cultured and propagated fish species in aquaculture and stock enhancements in the southern Africa sub-region. Aquaculture is perceived as a means of protein security, poverty alleviation, and economic development and, as such, any future decisions on its introduction will be based on the trade-off between socio-economic benefits and potential adverse ecological effects. [ABSTRACT FROM AUTHOR]

Simple Summary: Bangladesh has substantially increased aquaculture production over the last few decades, and the exotic species share a significant portion of the total fish production. Although exotic species are contributing to aquaculture production, a few of them are causing biodiversity loss and genetic erosion of native species. The African catfish Clarias gariepinus is a highly carnivorous species and predates small indigenous freshwater fishes when escaping into natural water bodies. In addition, the hybridization of C. batrachus and C. gariepinus is considered a threat to the indigenous population. Although the government of Bangladesh has banned the farming of C. gariepinus, this species has been identified in local markets, and evidence of hybridization between C. gariepinus and C. batrachus has been found. This study revealed genetic erosion of native C. batrachus by the gene sequences of cytochrome c oxidase subunit I and cytochrome b. The phylogenetic tree confirmed the occurrences of hybridization between C. gariepinus and C. batrachus. Genetic erosion in the native catfish population is alarming for aquaculture sustainability and biodiversity conservation in Bangladesh. The African catfish Clarias gariepinus has been introduced for aquaculture in Bangladesh due to the scarcity of indigenous C. batrachus fingerlings. However, the government of Bangladesh has banned the farming of C. gariepinus due to the carnivorous nature of this species. Recently C. gariepinus has been reported by fish farmers and consumers in Bangladesh, and unplanned hybridization between native and exotic species has been suspected. This study attempts to know the purity of C. batrachus by analyzing mitochondrial genes. Both directly sequenced and retrieved Cytochrome C Oxidase subunit I (COI) and cytochrome b (Cytb) genes from C. gareipinus and C. batrachus were analyzed by MEGA software. The morphologically dissimilar C. batrachus showed the least genetic distance (0.295) from C. gariepinus, which provided evidence of hybridization between the two species. Maximum likelihood (ML) phylogenetic trees showed that C. batrachus from Bangladesh did not cluster with C. batrachus of other countries, instead C. batrachus clustered with the exotic C. gariepinus. The suspected hybrid formed sister taxa with the exotic C. gariepinus. The study corroborates the genetic deterioration of C. batrachus by unplanned hybridization with the invasive C. gariepinus. Unplanned hybridization has deleterious consequences; therefore, immediate action is necessary for aquaculture sustainability and biodiversity conservation in Bangladesh. [ABSTRACT FROM AUTHOR]

The aboriginal ichthyofauna of the Balkhash basin consists mainly of endemic fish species. By the end of the last century, indigenous fish species were driven out of Lake Balkhash and the Alakol Lakes remain the largest refuges of aboriginal fish fauna. Knowledge of regularities of the modern distribution of the indigenous fishes is crucial for biodiversity conservation as well as restoring aquatic ecosystems. The modern diversity of fish species was investigated there in this study. Significant changes for the indigenous and some alien fish distributions were revealed in contrast with earlier known data. Canonical correspondence analysis (CCA) was used to study the relationships between habitat characteristics and species abundance. Water mineralization and maximal observed water temperatures were estimated as the main environmental variables in fish distribution at the local scale. Habitat change leads to fish fauna homogenization as a result of rare species extinction and alien penetration. Growing human population and poor water management make the future of the indigenous fishes unpredictable. [ABSTRACT FROM AUTHOR]

The Kizil reservoir in the Tarim River basin is an important habitat for the native Schizothoracinae fish (including Aspiorhynchus laticeps, Schizothorax biddulphi, Schizothorax eurystomus, Schizothorax intermedius and Schizothorax barbatus). Unfortunately, these species are threatened by many exotic fish, such as Ctenopharyngodon idellus, Silurus asotus. As an isolated habitat, the Kizil reservoir is an ideal area for studying biological invasions. However, the impact of invasive species on indigenous species in this reservoir remains unknown. In this study, the niche width and niche overlap between invasive and indigenous species in Kizil reservoir were studied based on stable isotope analysis. The results showed that niche width of two invasive species, S. asotus and C. idellus, was larger than that of native fish species, which confirmed the hypotheses that successful invaders have larger niche width. The niche overlap analysis showed that the two invasive species had high niche overlap with native fish species, which meant that there might be intensive interspecific competitions between them. The invasion of non-native species could be the main reason for the decrease of native species in the Kizil reservoir. [ABSTRACT FROM AUTHOR]

Knowledge of the composition of the gut microbiota in freshwater fish living in their natural habitat has taxonomic and ecological importance. Few reports have been produced on the composition of the gut microbiota and on the presence of LAB in the intestines of freshwater fish that inhabit river environments. In this study, we investigated the LAB community that was present in the gastrointestinal tract (GIT) of Mediterranean trout (Salmo macrostigma) that colonized the Biferno and Volturno rivers of the Molise region (Italy). The partial 16S rRNA gene sequences of these strains were determined for the species-level taxonomic placement. The phylogenetic analysis revealed that the isolated LABs belonged to seven genera (Carnobacterium, Enterococcus, Lactobacillus, Lactiplantibacillus, Vagococcus, Lactococcus, and Weissella). The study of the enzymatic activities showed that these LABs could contribute to the breakdown of polysaccharides, proteins, and lipids. In future studies, a greater understanding of how the LABs act against pathogens and trigger the fish immune response may provide practical means to engineer the indigenous fish microbiome and enhance disease control and fish health. [ABSTRACT FROM AUTHOR]