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The objective of this work was to investigate the influence of hydrogen bonds between fibres on static and dynamic strength properties of paper. A commercial bleached pinewood kraft pulp was soaked in water, refined in a PFI, and used to form paper webs in different solvents, such as water, methanol, ethanol, n-propanol and n-butanol, to determine the effect of their dipole moment on static and dynamic strength properties of resulting paper sheets. Paper which was formed in water, being the solvent of the highest dipole moment among the tested ones, showed the highest breaking length and tear resistance. When paper webs were formed in n-butanol, which was the least polar among the solvents, these parameters were reduced by around 75%. These results provide evidence of the importance of water in paper web formation and strong impact of hydrogen bonds between fibres on strength properties of paper. [ABSTRACT FROM AUTHOR]

Microbial fuel cells (MFCs) can evolve in a viable technology if environmentally sound materials are developed and became available at low cost for these devices. This is especially important not only for the designing of large wastewater treatment systems, but also for the fabrication of low-cost, single-use devices. In this work we synthesized membranes by a simple procedure involving easily-biodegradable and economic materials such as poly (vinyl alcohol) (PVA), chitosan (CS) and the composite PVA:CS. Membranes were chemical and physically characterized and compared to Nafion®. Performance was studied using the membrane as separator in a typical H-Type MFCs showing that PVA:CS membrane outperform Nafion® 4 times (power production) while being 75 times more economic. We found that performance in MFC depends over interactions among several membrane characteristics such as oxygen permeability and ion conductivity. Moreover, we design a paper-based micro-scale MFC, which was used as a toxicity assay using 16 μL samples containing formaldehyde as a model toxicant. The PVA:CS membrane presented here can offer low environmental impact and become a very interesting option for point of need single-use analytical devices, especially in low-income countries where burning is used as disposal method, and toxic fluoride fumes (from Nafion®) can be released to the environment. [ABSTRACT FROM AUTHOR]

With the rapid development of semiconductors, the number of materials needed to be polished sharply increases. The material properties vary significantly, posing challenges to chemical mechanical polishing (CMP). Accordingly, the study aimed to classify the material removal mechanism. Based on the CMP and atomic force microscopy results, the six representative metals can be preliminarily classified into two groups, presumably due to different material removal modes. From the tribology perspective, the first group of Cu, Co, and Ni may mainly rely on the mechanical plowing effect. After adding H2O2, corrosion can be first enhanced and then suppressed, affecting the surface mechanical strength. Consequently, the material removal rate (MRR) and the surface roughness increase and decrease. By comparison, the second group of Ta, Ru, and Ti may primarily depend on the chemical bonding effect. Adding H2O2 can promote oxidation, increasing interfacial chemical bonds. Therefore, the MRR increases, and the surface roughness decreases and levels off. In addition, CMP can be regulated by tuning the synergistic effect of oxidation, complexation, and dissolution for mechanical plowing, while tuning the synergistic effect of oxidation and ionic strength for chemical bonding. The findings provide mechanistic insight into the material removal mechanism in CMP. [ABSTRACT FROM AUTHOR]

Though YB6 and LaB6 share the same crystal structure, atomic valence electron configuration, and phonon modes, they exhibit drastically different phonon-mediated superconductivity. YB6 superconducts below 8.4 K, giving it the second-highest critical temperature of known borides, second only to MgB2. LaB6 does not superconduct until near-absolute zero temperatures (below 0.45 K), however. Though previous studies have quantified the canonical superconductivity descriptors of YB6's greater Fermi-level (Ef ) density of states and higher electron-phonon coupling (EPC), the root of this difference has not been assessed with full detail of the electronic structure. Through chemical bonding, we determine low-lying, unoccupied 4f atomic orbitals in lanthanum to be the key difference between these superconductors. These orbitals, which are not accessible in YB6, hybridize with π B-B bonds and bring this π-system lower in energy than the σ B-B bonds otherwise at Ef. This inversion of bands is crucial: the optical phonon modes we show responsible for superconductivity cause the σ-orbitals of YB6 to change drastically in overlap, but couple weakly to the π-orbitals of LaB6. These phonons in YB6 even access a crossing of electronic states, indicating strong EPC. No such crossing in LaB6 is observed. Finally, a supercell (the M k-point) is shown to undergo Peierls-like effects in YB6, introducing additional EPC from both softened acoustic phonons and the same electron-coupled optical modes as in the unit cell. Overall, we find that LaB6 and YB6 have fundamentally different mechanisms of superconductivity, despite their otherwise near-identity. [ABSTRACT FROM AUTHOR]

In this research, the needle punched and chemical bonded nonwovens were developed by blending banana fiber and recycled polyester (r-PET) in three blend ratios (90% banana/10% r-PET, 70% banana/30% r-PET, 50% banana/50% r-PET). The developed nonwovens were characterized by thermal insulation and biodegradation properties. Results showed that all developed nonwovens have an excellent insulation performance; the thermal resistance value is in the range of 0.299 to 0.248 m2K/W. It was observed that nonwovens made from 90% banana/10% r-PET have better thermal insulation compared to other blend ratios in both techniques. It was also observed that the chemical bonded nonwovens had a 6.69% higher thermal resistance value compared to the needle punched nonwovens. A bi-layer hybrid structure made with chemical bonded nonwoven and needle punched nonwoven provided a thermal resistance value of 0.43 m2K/W. The chemical bonded nonwovens showed lower biodegradation compared to needle punched nonwovens. [ABSTRACT FROM AUTHOR]

Analysis of cultural heritage samples by PIXE involves the risk of damaging precious samples due to MeV-proton irradiation. To investigate appropriate methods to detect invisible damage due to PIXE analysis, we analyzed the change in chemical bonding of the sample surface subjected to PIXE and RBS measurement by Fourier Transform InfraRed spectroscopy (FT-IR). We used Japanese hemp paper as a simulated cultural property sample. The proton irradiation for the PIXE/RBS measurement was performed in a vacuum with an incident beam energy of 2.5 MeV, a beam current of 1 nA, and an irradiation time up to 10 min. The corresponding beam flux and fluence were 0.06 nA/mm2 and 4 μ Coulomb/cm2, respectively. When the irradiation time was 10 min, the absorbed dose was 480 kGy on the sample surface. We identified neither change of elemental composition nor visible change such as discoloration due to irradiation. However, we found changes in peak heights in the measured FT-IR spectra, which suggest the destruction of chemical bonds such as O–H and C–O due to proton-induced radiation damage. [ABSTRACT FROM AUTHOR]

We performed quantum chemical calculations on the geometries, electronic structures, bonding properties, and stability strategy of endohedral metallofullerenes TM@C28 (TM = Sc−, Y−, La−, Ti, Zr, Hf, V+, Nb+, Ta+). Our calculations revealed that there are three different lowest-energy structures with C2v, C3v, and Td symmetries for TM@C28. The HOMO–LUMO gap of all these structures ranges from 1.35 eV to 2.31 eV, in which [V@C28]+ has the lowest HOMO–LUMO gap of 1.35 eV. The molecular orbitals are mainly composed of fullerene cage orbitals and slightly encapsulated metal orbitals. The bonding analysis on the metal–cage interactions reveals they are dominated by the Coulomb term ΔEelstat and the orbital interaction term ΔEorb, in which the orbital interaction term ΔEorb contributes more than the Coulomb term ΔEelstat. The addition of one or two CF3 groups to [V@C28]+ could increase the HOMO–LUMO gap and further increase the stability of [V@C28]+. [ABSTRACT FROM AUTHOR]

For a period of several years the philosopher of science Hasok Chang has promoted various inter-related views including pluralism, pragmatism, and an associated view of natural kinds. He has also argued for what he calls the persistence of everyday terms in the scientific view. Chang claims that terms like phlogiston were never truly abandoned but became transformed into different concepts that remain useful. On the other hand, Chang argues that some scientific terms such as acidity have suffered a form of "rupture", especially in the case of the modern Lewis definition of acids. Chang also complains that the degree of acidity of a Lewis acid cannot be measured using a pH meter and seems to regard this as a serious problem. The present paper examines some of these views, especially what Chang claims to be a rupture in the definition of acidity. It is suggested that there has been no such rupture but a genuine generalization, on moving from the Brønsted-Lowry theory to the Lewis theory of acidity. It will be shown how the quantification and measurement of Lewis acidity can easily be realized through the use of equilibrium theory and the use of stability constants. [ABSTRACT FROM AUTHOR]

The concept of chemical bonding is a crucial one in chemistry that occurs throughout the school curriculum and forms the basis of many topics in chemistry. Furthermore, learning about chemical bonding allows the learner to make predictions and provide explanations regarding the physical and chemical properties of substances. However, chemical bonding has been cited as one of the most difficult chemistry concepts for many secondary and higher education students to understand, and therefore, teachers can find it difficult to teach this concept due to the complexity of the underlying theory as well as the need to use abstract models to represent chemical bonds. The teaching methods used in the implementation of the concept can also be challenging. The aim of this study is to reveal the difficulties and alternative conceptions encountered by Moroccan secondary school students when learning concepts related to chemical bonding, the main causes of these difficulties, and the strategies used by teachers to help students overcome these obstacles. In this study, we conducted a survey of 57 Moroccan secondary school physical science teachers by means of a questionnaire. The questionnaire, consisting of three parts, was used to collect the data. Each part contains closed questions, open questions, and multiple-choice questions. The analysis of the results highlights the difficulties and alternative conceptions most frequently made by the students, namely: the octet rule, the geometry of molecules, and the polarity of molecules. Factors contributing to students' misconceptions include the nature of abstract concepts, the use of models, and the difficulty for teachers to explain certain concepts related to chemical bonding. The study also presents some suggestions for improving the teaching of chemical bonding, such as integrating information and communication technologies (ICT), diversifying the teaching tools used, and taking into account students' pre-existing conceptions. This can help teachers, curriculum developers, and textbook authors make the subject easier for students and address their misconceptions. [ABSTRACT FROM AUTHOR]

Robin Hendry has presented an account of two equally valid ways of understanding the nature of chemical bonding, consisting of what the terms the structural and the energetic views respectively. In response, Weisberg has issued a "challenge to the structural view", thus implying that the energetic view is the more correct of the two conceptions. In doing so Weisberg identifies the delocalization of electrons as the one robust feature that underlies the increasingly accurate quantum mechanical calculations starting with the Heitler-London method and moving on to such approaches as the valence bond and molecular orbital theories of chemical bonding. The present article provides a critical evaluation of Weisberg's article and concludes that he fails to characterize the nature of chemical bonding in several respects. I claim that Hendry's structural and energetic views remain as equally viable ways of understanding chemical bonding. Whereas the structural view is more appropriate for chemists, the energetic view is preferable to physicists. Neither view is more correct unless one subscribes to the naively reductionist view of considering that the more physical energetic view is the more correct one. [ABSTRACT FROM AUTHOR]

Inverse sandwich clusters composed of a monocyclic boron ring and two capping transition metal atoms are interesting alloy cluster systems, yet their chemical bonding nature has not been sufficiently elucidated to date. We report herein on the theoretical prediction of a new example of boron-based inverse sandwich alloy clusters, V2B7−, through computational global-minimum structure searches and quantum chemical calculations. This alloy cluster has a heptatomic boron ring as well as a perpendicular V2 dimer unit that penetrates through the ring. Chemical bonding analysis suggests that the inverse sandwich cluster is governed by globally delocalized 6π and 6σ frameworks, that is, double 6π/6σ aromaticity following the (4n + 2) Hückel rule. The skeleton B−B σ bonding in the cluster is shown not to be strictly Lewis-type two-center two-electron (2c-2e) σ bonds. Rather, these are quasi-Lewis-type, roof-like 4c-2e V−B2−V σ bonds, which amount to seven in total and cover the whole surface of inverse sandwich in a truly three-dimensional manner. Theoretical evidence is revealed for a 2c-2e Lewis σ single bond within the V2 dimer. Direct metal–metal bonding is scarce in inverse sandwich alloy clusters. The present inverse sandwich alloy cluster also offers a new type of electronic transmutation in physical chemistry, which helps establish an intriguing chemical analogy between inverse sandwich clusters and planar hypercoordinate molecular wheels. [ABSTRACT FROM AUTHOR]

The gallide SrMg2Ga2 was obtained by direct reaction of the elements in a sealed tantalum ampoule. Single crystals were grown by slowly cooling the sample within a muffle furnace. The SrMg2Ga2 structure was refined from single crystal X-ray diffractometer data: I4/mmm, a = 450.52(7), c = 1169.39(18) pm, wR2 = 0.0349, 164 F2 values, 11 variables. The magnesium and gallium atoms build up a three-dimensional [Mg2Ga2] network which is composed of layers of edge-sharing MgGa4 tetrahedra with 280 pm Mg–Ga. Adjacent layers are condensed by Ga–Ga bonding (253 pm). The strontium atoms fill large Ga8Mg8 cages. Electronic structure calculations within Density Functional Theory (DFT) show charge transfers from Sr and Mg to Ga with ionocovalent behavior. The electronic density of states is dominated by Ga states and reveals metallic behavior. The chemical bonding is strong with dominant Mg–Ga and Ga–Ga mixing. [ABSTRACT FROM AUTHOR]

Polycarbonate/aluminum alloy hybrids were prepared using a homemade ultrasound-assisted hot pressing molding (UAHPM) technique, and their properties and structures at the plastic-metal interface were also investigated. The aluminum alloy surface was chemically etched and anodized to form micron and nano-holes structures. The joint strength of 21.58 MPa was achieved at the optimum molding process by optimizing the process parameters of ultrasonic hot compression molding. The specific structure and morphology of the polycarbonate/aluminum hybrid material bonding layer were observed by field emission scanning electron microscopy (FE-SEM) using the ultrathin sectioning technique, and the plastic embedding depth reached about 3.8 µm under the optimal process conditions. X-ray photoelectron spectroscopy (XPS) analysis revealed that the bonding layer not only has a micro-nano interlocking structure but also forms an Al-O-C chemical bonding interaction. The plastic in the bonding layer was exposed by dissolving the aluminum alloy of the joint, and the filling form of the plastic in the micro-nanoholes was directly observed. [ABSTRACT FROM AUTHOR]

Bonding in the C2 molecule is investigated with CAS(8,8) wave functions using canonical MOs. In a subsequent step, orthogonal atomic orbitals are constructed by localizing the CASSCF MOs on the two carbon atoms with an orthogonal transformation. This orbital transformation causes an orthogonal transformation of the configuration state functions (CSF) spanning the function space of the singlet ground state of C2. Instead of CSFs built from canonical MOs, one obtains CSFs of orthogonal deformed atomic orbitals (AO). This approach resembles the orthogonal valence bond (OVB) methods' CSFs, which are very different from the conventional VB, based on non-orthogonal AOs. To become used to the different argumentation, the bonding situations in ethane (single bond), ethene (double bond), and the nitrogen molecule (triple bond) are also studied. The complex bonding situation in C2 is caused by the possibility to excite an electron with a spin flip from the doubly occupied 2s AO into the 2p subshell, and the resulting high-spin 5 S u state of the carbon atom allows for a better reduction of the Pauli repulsion. However, the electron structure around the equilibrium distance does not allow one to say that C2 in its ground state has a double, or triple, or even a quadruple bond. [ABSTRACT FROM AUTHOR]

Inorganic silicate impregnation-modified fast-growing wood shows improved mechanical properties and thermal stability, but inorganic silicate agent loss and moisture absorption affect its processability. This study proposes a method to improve the impregnating agent loss and modified wood moisture absorption of poplar wood modified by using an acrylic acid emulsion/sodium silicate composite. The acrylic acid emulsion coated the sodium silicate and cell wall surfaces with a cured film that blocked water molecules from entering the modified wood. The acrylic acid emulsion adhered to the wood and sodium silicate, thus reducing impregnating agent loss. The addition of the acrylic acid emulsion maintained the excellent mechanical properties of sodium silicate-modified poplar wood and greatly improved its bending strength. The water absorption and moisture swelling rate were significantly decreased, and the dimensional stability of modified poplar wood was more than 50% higher than that of unmodified poplar wood. The thermogravimetric analysis (TG)results showed that the addition of organic components reduced the heat resistance of modified wood, but the thermal stability was still higher than unmodified wood. Fourier-transform infrared (FTIR) spectroscopy and X-ray photoelectron spectroscopy (XPS) results showed that acrylic esters in acrylic acid emulsion reacted with hydroxyl groups on sodium silicate and wood to form covalent bonds that improved the impregnating agent's resistance to loss and reduced the moisture absorption of the wood. The modified poplar wood showed better dimensional stability and water resistance. [ABSTRACT FROM AUTHOR]

The synthesis of the linearly N2 bridged, dichromium complex [(μ‐N2){Cr(PNP)}2] (PNP=N(CHCHPtBu2)2) is reported. Experimental and computational data favor a three‐spin electronic structure model with high‐spin CrII ions that are antiferromagnetically coupled to an N22− bridge due to spin‐polarized backbonding. Reaction with CO gave isocarbonyl complex [(PNP)(CO)2Cr(μ‐CO)Cr(PNP)] and [(PNP)(CO)2Cr(μ‐N2)Cr(PNP)] could be trapped as intermediate. The latter is best described by a (ls‐CrI)(N2−)(hs‐CrII) ground state model, while more covalent bonding with the CO bridge is reflected by a (ls‐Cr0)(CO0)(hs‐CrII) electronic structure description. The selectivity of the carbonylation reaction is attributed to a spin transition after binding of the first CO ligand to [(μ‐N2){Cr(PNP)}2]. [ABSTRACT FROM AUTHOR]

Doping alkali metals into boron clusters can effectively compensate for the intrinsic electron deficiency of boron and lead to interesting boron-based binary clusters, owing to the small electronegativity of the former elements. We report on the computational design of a three-layered sandwich cluster, Na5B7, on the basis of global-minimum (GM) searches and electronic structure calculations. It is shown that the Na5B7 cluster can be described as a charge-transfer complex: [Na4]2+[B7]3−[Na]+. In this sandwich cluster, the [B7]3− core assumes a molecular wheel in shape and features in-plane hexagonal coordination. The magic 6π/6σ double aromaticity underlies the stability of the [B7]3− molecular wheel, following the (4n + 2) Hückel rule. The tetrahedral Na4 ligand in the sandwich has a [Na4]2+ charge-state, which is the simplest example of three-dimensional aromaticity, spherical aromaticity, or superatom. Its 2σ electron counting renders σ aromaticity for the ligand. Overall, the sandwich cluster has three-fold 6π/6σ/2σ aromaticity. Molecular dynamics simulation shows that the sandwich cluster is dynamically fluxional even at room temperature, with a negligible energy barrier for intramolecular twisting between the B7 wheel and the Na4 ligand. The Na5B7 cluster offers a new example for dynamic structural fluxionality in molecular systems. [ABSTRACT FROM AUTHOR]

Activation of the dinitrogen triple bond is a crucial step in the overall fixation of atmospheric nitrogen into usable forms for industrial and biological applications. Current synthetic catalysts incorporate metal ions to facilitate the activation and cleavage of dinitrogen. The high price of metal‐based catalysts and the challenge of catalyst recovery during industrial catalytic processes has led to increasing interest in metal‐free catalysts. One step toward metal‐free catalysis is the use of frustrated Lewis pairs (FLPs). In this study, we have examined 18 functionalized carbenes as FLPs to elucidate the influence of steric and electronic effects on the activation of dinitrogen. To test the effects of functionalization on dinitrogen activation, we have performed density functional theory (DFT), multireference, non and extended transition state‐natural orbital for chemical valence (ETS‐NOCV) calculations. Our results suggest that functional groups which introduce strong electron‐withdrawing effects and/or engage in extended π/π* systems lead to the lowering of the dissociation energy of the dinitrogen bond, which further contributes to greater nitrogen activation. We conjecture that these effects are due to enhanced back‐bonding capability of the p orbital of the carbene carbon atoms to the adjacent nitrogen atoms (increasing Lewis basicity of the carbene carbon atom) and enhanced stability of dissociated products. Our concluding remarks include opportunities to extend this activation study to explore the entire catalytic cycle with promising functionalized carbenes for experimental evaluation. [ABSTRACT FROM AUTHOR]

This research paper reports a study on thermal and sound insulation samples developed from recycled cotton/polyester (recycled cotton/PET) for construction industry applications. The waste recycled cotton and polyester fiber is a potential source of raw material that can be considered for thermal and sound insulation applications, but its quantities are limited. While the quantities are limited, waste recycled cotton fiber was mixed with recycled/PET fiber in 50/50 proportions in the form of two-layer nonwoven mats with a chemical bonding method. The samples such as cotton (color and white), polyester (color and white), and cotton-polyester blend (color and white) were prepared. All the samples were tested for thermal insulation, sound absorption, moisture absorption, and fiber properties as per the ASTM standard. Also, behaviors of six recycled cotton/polyester nonwoven samples under high humidity conditions were evaluated. The sound absorption coefficients were measured according to ASTM E 1050 by an impedance tube method, the sound absorption coefficient over six frequencies 125, 250, 500, 1000, 2000, and 4000 Hz were calculated. The result revealed that nonwoven mats that are prepared from recycled/PET/cotton waste have confirmed more than 70% of the sound absorption coefficient and the recycled nonwoven mats provided the best insulation, sound absorption, moisture absorption, and fiber properties. The recycled waste cotton/ polyester nonwoven mats have adequate moisture resistance at high humidity conditions without affecting the insulation and sound-absorbing properties. [ABSTRACT FROM AUTHOR]

In 1966, Zimmerman proposed a type of Möbius aromaticity that involves through‐space electron delocalization; it has since been widely applied to explain reactivity in pericyclic reactions, but is considered to be limited to transition‐state structures. Although the easily accessible hexahelicene radical anion has been known for more than half a century, it was overlooked that it exhibits a ground‐state minimum and robust Zimmerman‐Möbius aromaticity in its central noose‐like opening, becoming, hence, the oldest existing Möbius aromatic system and with smallest Möbius cycle known. Despite its overall aromatic stabilization energy of 13.6 kcal mol−1 (at B3LYP/6‐311+G**), the radical also features a strong, globally induced paramagnetic ring current along its outer edge. Exclusive global paramagnetic currents can also be found in other fully delocalized radical anions of 4N+2 π‐electron aromatic polycyclic benzenoid hydrocarbons (PAH), thus questioning the established magnetic criterion of antiaromaticity. As an example of a PAH with nontrivial topology, we studied a novel Möbius[16]cyclacene that has a non‐orientable surface manifold and a stable closed‐shell singlet ground state at several density functional theory levels. Its metallic monoanion radical (0.0095 eV band gap at HSE06/6‐31G* level) is also wave‐function stable and displays an unusual 4π‐periodic, magnetically induced ring current (reminiscent of the transformation behaviour of spinors under spatial rotation), thus indicating the existence of a new, Hückel‐rule‐evading type of aromaticity. [ABSTRACT FROM AUTHOR]

Hypercoordinate transition-metal species are mainly dominated by the 18-valence-electron (18ve) counting. Herein, we report ternary MAl6S6 (M = Ni, Pd, Pt) clusters with the planar hexacoordinate metal (phM) centers, which feature 16ve counting instead of the classic 18ve rule. These global-minimum clusters are established via unbiased global searches, followed by PBE0 and single-point CCSD(T) calculations. The phM MAl6 units are stabilized by six peripheral bridging S atoms in these star-like species. Chemical bonding analyses reveal that there are 10 delocalized electrons around the phM center, which can render the aromaticity according to the (4n + 2) Hückel rule. It is worth noting that adding an (or two) electron(s) to its π-type lowest unoccupied molecular orbital (LUMO) will make the system unstable. [ABSTRACT FROM AUTHOR]

The power of the Hellmann–Feynman theorem is primarily conceptual. It provides insight and understanding of molecular properties and behavior. In this overview, we discuss several examples of concepts coming out of the theorem. (1) It shows that the forces exerted upon the nuclei in a molecule, which hold the molecule together, are purely Coulombic in nature. (2) It indicates whether the role of the electronic charge in different portions of a molecule's space is bond-strengthening or bond-weakening. (3) It demonstrates the importance of the electrostatic potentials at the nuclei of a molecule, and that the total energies of atoms and molecules can be expressed rigorously in terms of just these potentials, with no explicit reference to electron–electron interactions. (4) It shows that dispersion forces arise from the interactions of nuclei with their own polarized electronic densities. Our discussion focuses particularly upon the contributions of Richard Bader in these areas. [ABSTRACT FROM AUTHOR]

Several alkaline earth or rare earth binary monosilicides and -germanides possess complex bonding properties, such as polycation formation exceeding the scope of classical electron counting rules. In this study, we present characterization by powder and single-crystal diffraction and thermal analysis of CeGe, one of the few monogermanides crystallizing in the FeB-type structure. Comparative computational investigations for structure types experimentally observed for monogermanides and alternative structures with different structural motifs were performed to gain energetical insights into this family of compounds, underlining the preference for infinite germanium chains over other structural motifs. Formation enthalpy calculations and structural chemical analysis highlight the special position of FeB-type compounds among the monogermanides. [ABSTRACT FROM AUTHOR]

Phosphanylgallane with hydrogen and halogen substituents (RXGa−PHR, R=organic substituent, X=halogen/hydrogen) are regarded as putative suitable precursors for accessing Ga=P doubly bonded species. Herein, we report on the synthesis, structure, and bonding analysis of a series of Lewis base‐ and Lewis acid/base‐stabilized phosphanylgallane bearing P−H and Ga−Cl/H substitution. To avoid oligomerization, the treatment of IDip.GaCl3 and (IDip)GaH2Cl (IDip=1,3‐bis(2,6‐diisopropylphenyl) imidazole‐2‐ylidene) with LiPHR or LiPHR(BH3) (R=Ph, Tip, Mes, NiPr2, NCy2) affords the corresponding Lewis base and Lewis acid/base coordinated H,Cl‐functionalized monomeric phosphanylgallane, respectively. The structure of these derivatives were determined by spectroscopic and X‐ray crystallographic analyses. The observed Ga−P bond lengths are comparable to those previously reported phosphanylgallane analogues. The nature of the CIDip‐Ga coordination bond was assessed with Energy Decomposition Analysis, suggesting a relatively stable adduct. Reactions of the phosphanylgallane with Brønsted bases were investigated. [ABSTRACT FROM AUTHOR]

Twenty-five molecule–anion complex systems [I4Tt···X−] (Tt = C, Si, Ge, Sn and Pb; X = F, Cl, Br, I and At) were examined using density functional theory (ωB97X-D) and ab initio (MP2 and CCSD) methods to demonstrate the ability of the tetrel atoms in molecular entities, I4Tt, to recognize the halide anions when in close proximity. The tetrel bond strength for the [I4C···X−] series and [I4Tt···X−] (Tt = Si, Sn; X = I, At), was weak-to-moderate, whereas that in the remaining 16 complexes was dative tetrel bond type with very large interaction energies and short Tt···X close contact distances. The basis set superposition error corrected interaction energies calculated with the highest-level theory applied, [CCSD(T)/def2-TZVPPD], ranged from −3.0 to −112.2 kcal mol−1. The significant variation in interaction energies was realized as a result of different levels of tetrel bonding environment between the interacting partners at the equilibrium geometries of the complex systems. Although the ωB97X-D computed intermolecular geometries and interaction energies of a majority of the [I4Tt···X−] complexes were close to those predicted by the highest level of theory, the MP2 results were shown to be misleading for some of these systems. To provide insight into the nature of the intermolecular chemical bonding environment in the 25 molecule–anion complexes investigated, we discussed the charge-density-based topological and isosurface features that emanated from the application of the quantum theory of atoms in molecules and independent gradient model approaches, respectively. [ABSTRACT FROM AUTHOR]

This research paper reports a study on thermal and sound insulation samples developed from recycled cotton/polyester (recycled cotton/PET) for construction industry applications. The waste recycled cotton and polyester fiber is a potential source of raw material that can be considered for thermal and sound insulation applications, but its quantities are limited. While the quantities are limited, waste recycled cotton fiber was mixed with recycled/PET fiber in 50/50 proportions in the form of two-layer nonwoven mats with a chemical bonding method. The samples such as cotton (color and white), polyester (color and white), and cotton-polyester blend (color and white) were prepared. All the samples were tested for thermal insulation, sound absorption, moisture absorption, and fiber properties as per the ASTM standard. Also, behaviors of six recycled cotton/polyester nonwoven samples under high humidity conditions were evaluated. The sound absorption coefficients were measured according to ASTM E 1050 by an impedance tube method, the sound absorption coefficient over six frequencies 125, 250, 500, 1000, 2000, and 4000 Hz were calculated. The result revealed that nonwoven mats that are prepared from recycled/PET/cotton waste have confirmed more than 70% of the sound absorption coefficient and the recycled nonwoven mats provided the best insulation, sound absorption, moisture absorption, and fiber properties. The recycled waste cotton/polyester nonwoven mats have adequate moisture resistance at high humidity conditions without affecting the insulation and sound-absorbing properties. [ABSTRACT FROM AUTHOR]

The paper collects the answers of the authors to the following questions:Is the lack of precision in the definition of many chemical concepts one of the reasons for the coexistence of many partition schemes?Does the adoption of a given partition scheme imply a set of more precise definitions of the underlying chemical concepts?How can one use the results of a partition scheme to improve the clarity of definitions of concepts?Are partition schemes subject to scientific Darwinism? If so, what is the influence of a community's sociological pressure in the "natural selection" process?To what extent does/can/should investigated systems influence the choice of a particular partition scheme?Do we need more focused chemical validation of Energy Decomposition Analysis (EDA) methodology and descriptors/terms in general?Is there any interest in developing common benchmarks and test sets for cross‐validation of methods?Is it possible to contemplate a unified partition scheme (let us call it the "standard model" of partitioning), that is proper for all applications in chemistry, in the foreseeable future or even in principle?In the end, science is about experiments and the real world. Can one, therefore, use any experiment or experimental data be used to favor one partition scheme over another? © 2019 Wiley Periodicals, Inc. [ABSTRACT FROM AUTHOR]

The ambiguous behavior of metal–graphene interface has been addressed in this paper using density functional theory and nonequilibrium Green’s function formalism. For the first time, the fundamental chemistry of metal–graphene interface, in particular role of sp-hybridized and sp2-hybridized carbon atoms, has been emphasized and discussed in detail in this paper. It was discovered that the sp-hybridized sites at the edge of a graphene monolayer contribute to 40% of current conduction when compared with sp2-hybridized atom sites in the graphene–metal overlap region. Moreover, we highlighted the insignificance of an additional metal layer, i.e., sandwiched contact, due to lacking sp-hybridized carbon sites. A fundamental way of defining the contact resistance, while keeping chemical bonding in mind, has been proposed. The bonding insight has been further used to propose the novel ways of interfacing metal with graphene, which results in a 40% reduction in contact resistance. [ABSTRACT FROM PUBLISHER]

Melamine is a precursor and building block for graphitic carbon nitride (g‐CN) materials, a group of layered materials showing great promise for catalytic applications. The synthetic pathway to g‐CN includes a polycondensation reaction of melamine by evaporation of ammonia. Melamine molecules in the crystal organize into wave‐like planes with an interlayer distance of 3.3 Å similar to that of g‐CN. Here we present an extensive investigation of the experimental electron density of melamine obtained from modelling of synchrotron radiation X‐ray single‐crystal diffraction data measured at 25 K with special focus on the molecular geometry and intermolecular interactions. Both intra‐ and interlayer structures are dominated by hydrogen bonding and π‐interactions. Theoretical gas‐phase optimizations of the experimental molecular geometry show that bond lengths and angles for atoms in the same chemical environment (C−N bonds in the ring, amine groups) differ significantly more for the experimental geometry than for the gas‐phase‐optimized geometries, indicating that intermolecular interactions in the crystal affects the molecular geometry. In the experimental crystal geometry, one amine group has significantly more sp3‐like character than the others, hinting at a possible formation mechanism of g‐CN. Topological analysis and energy frameworks show that the nitrogen atom in this amine group participates in weak intralayer hydrogen bonding. We hypothesize that melamine condenses to g‐CN within the layers and that the unique amine group plays a key role in the condensation process. [ABSTRACT FROM AUTHOR]

Carrageenans are commercially important sulfated gums found in various species of red seaweeds (Rhodophyta), wherein they serve a structural function similar to that of pectins in land plants. In this study, carrageenan was used independently or in combination with cationic polyacrylamide (CPAM) and/or Al2(SO4)3 to explore its application as a dry strength additive in papermaking. Strength index determination, ash content detection, FTIR characterization and SEM observation were performed on prepared handsheets. The results showed that with 0.6% Al2(SO4)3 and 0.2% carrageenan as additives, the tensile index increased by 13.53% and precipitated calcium carbonate (PCC) retention increased by 57.06%. With 0.6% Al2(SO4)3, 0.2% carrageenan and 0.03% CPAM as additives, PCC retention increased by 121% while the tensile index did not fall compared to handsheets without additives, indicating that carrageenan could enhance the strength of handsheets and be used as an anionic dry strength agent. [ABSTRACT FROM AUTHOR]

Sigma factors are key proteins that mediate the recruitment of RNA polymerase to the promoter regions of genes, for the initiation of bacterial transcription. Multiple sigma factors in a bacterium selectively recognize their cognate promoter sequences, thereby inducing the expression of their own regulons. In this paper, we report the crystal structure of the σ4 domain of Bacillus subtilis SigW bound to the -35 promoter element. Purine-specific hydrogen bonds of the -35 promoter element with the recognition helix α9 of the σ4 domain occurs at three nucleotides of the consensus sequence (G-35, A-34, and G’-31 in G-35A-34A-33A-32C-31C-30T-29). The hydrogen bonds of the backbone with the α7 and α8 of the σ4 domain occurs at G’-30. These results elucidate the structural basis of the selective recognition of the promoter by SigW. In addition, comparison of SigW structures complexed with the -35 promoter element or with anti-sigma RsiW reveals that DNA recognition and anti-sigma factor binding of SigW are mutually exclusive. [ABSTRACT FROM AUTHOR]

Our understanding of how chromosomes structurally organize and dynamically interact has been revolutionized through the lens of long-chain polymer physics. Major protein contributors to chromosome structure and dynamics are condensin and cohesin that stochastically generate loops within and between chains, and entrap proximal strands of sister chromatids. In this paper, we explore the ability of transient, protein-mediated, gene-gene crosslinks to induce clusters of genes, thereby dynamic architecture, within the highly repeated ribosomal DNA that comprises the nucleolus of budding yeast. We implement three approaches: live cell microscopy; computational modeling of the full genome during G1 in budding yeast, exploring four decades of timescales for transient crosslinks between 5kbp domains (genes) in the nucleolus on Chromosome XII; and, temporal network models with automated community (cluster) detection algorithms applied to the full range of 4D modeling datasets. The data analysis tools detect and track gene clusters, their size, number, persistence time, and their plasticity (deformation). Of biological significance, our analysis reveals an optimal mean crosslink lifetime that promotes pairwise and cluster gene interactions through “flexible” clustering. In this state, large gene clusters self-assemble yet frequently interact (merge and separate), marked by gene exchanges between clusters, which in turn maximizes global gene interactions in the nucleolus. This regime stands between two limiting cases each with far less global gene interactions: with shorter crosslink lifetimes, “rigid” clustering emerges with clusters that interact infrequently; with longer crosslink lifetimes, there is a dissolution of clusters. These observations are compared with imaging experiments on a normal yeast strain and two condensin-modified mutant cell strains. We apply the same image analysis pipeline to the experimental and simulated datasets, providing support for the modeling predictions. [ABSTRACT FROM AUTHOR]

Growing demands of material science and, in particular, in the field of nonlinear optics (NLO) encourage us to look for stable highly polarizable molecules with excess diffuse electrons. An unusual class of compounds called electrides comply with these requirements. Many attempts have been made, yet only few electrides have been synthesized as solids and none of them as molecular species. In this paper, a new theoretically designed molecular species with electride characteristics is reported. The idea of this molecular electride comes from the formation of electride‐like features in the MgO crystal with defect F‐centers. The geometry of the investigated molecule can be described as a Mg4O4 cube with one oxygen atom removed. In Mg4O3, two 3s electrons are pushed out from the inner area of the molecule forming a diffuse electride multicentered bond. Our calculations show that this electride‐like cluster possesses a noticeably large first hyperpolarizability β=5733 au. At the same time, a complete cube Mg4O4 and Mg4O32+ without electride electron pair have much smaller β: 0 au and 741 au, respectively. This fact indicates the decisive role of the electride electron pair in NLO properties. Additionally, vertical detachment energies of isomers (VDE), excitation energies ΔE, polarizabilities α, and IR spectra were calculated. These properties, including β, are supposed to be observable experimentally and can serve as indirect evidence of the stable molecular electride formation. Elusive electride: Many attempts have been made, yet only few electrides have been synthesized as solids and none of them as molecular species. A theoretically designed molecular species with electride characteristics is reported based on the idea of formation of electride‐like features in MgO crystals with defect F‐centers. [ABSTRACT FROM AUTHOR]

Bacteria contain several nucleoid-associated proteins that organize their genomic DNA into the nucleoid by bending, wrapping or bridging DNA. The Histone-like Nucleoid Structuring protein H-NS found in many Gram-negative bacteria is a DNA bridging protein and can structure DNA by binding to two separate DNA duplexes or to adjacent sites on the same duplex, depending on external conditions. Several nucleotide sequences have been identified to which H-NS binds with high affinity, indicating H-NS prefers AT-rich DNA. To date, highly detailed structural information of the H-NS DNA complex remains elusive. Molecular simulation can complement experiments by modelling structures and their time evolution in atomistic detail. In this paper we report an exploration of the different binding modes of H-NS to a high affinity nucleotide sequence and an estimate of the associated rate constant. By means of molecular dynamics simulations, we identified three types of binding for H-NS to AT-rich DNA. To further sample the transitions between these binding modes, we performed Replica Exchange Transition Interface Sampling, providing predictions of the mechanism and rate constant of H-NS binding to DNA. H-NS interacts with the DNA through a conserved QGR motif, aided by a conserved arginine at position 93. The QGR motif interacts first with phosphate groups, followed by the formation of hydrogen bonds between acceptors in the DNA minor groove and the sidechains of either Q112 or R114. After R114 inserts into the minor groove, the rest of the QGR motif follows. Full insertion of the QGR motif in the minor groove is stable over several tens of nanoseconds, and involves hydrogen bonds between the bases and both backbone and sidechains of the QGR motif. The rate constant for the process of H-NS binding to AT-rich DNA resulting in full insertion of the QGR motif is in the order of 106 M−1s−1, which is rate limiting compared to the non-specific association of H-NS to the DNA backbone at a rate of 108 M−1s−1. [ABSTRACT FROM AUTHOR]

Glass‐forming metal–organic frameworks (MOFs) have novel applications, but the origin of their peculiar melting behavior is unclear. Here, we report synchrotron X‐ray diffraction electron densities of two zeolitic imidazolate frameworks (ZIFs), the glass‐forming Zn‐ZIF‐zni and the isostructural thermally decomposing Co‐ZIF‐zni. Electron density analysis shows that the Zn−N bonds are more ionic than the Co−N bonds, which have distinct covalent features. Variable‐temperature Raman spectra reveal the onset of significant imidazolate bond weakening in Co‐ZIF‐zni above 673 K. Melting can be controlled by tuning the metal–ligand and imidazole bonding strength as shown from thermal analysis of nine solid‐solution CoxZn1−x‐ZIF‐zni (x=0.3 to 0.003) MOFs, and a mere 4 % Co‐doping into Zn‐ZIF‐zni results in thermal decomposition instead of melting. The present findings demonstrate the key role of the metal–ligand bonds and imidazolate bonds in controlling the delicate balance between melting and decomposition processes in this class of ZIF compounds. [ABSTRACT FROM AUTHOR]

Glass‐forming metal–organic frameworks (MOFs) have novel applications, but the origin of their peculiar melting behavior is unclear. Here, we report synchrotron X‐ray diffraction electron densities of two zeolitic imidazolate frameworks (ZIFs), the glass‐forming Zn‐ZIF‐zni and the isostructural thermally decomposing Co‐ZIF‐zni. Electron density analysis shows that the Zn−N bonds are more ionic than the Co−N bonds, which have distinct covalent features. Variable‐temperature Raman spectra reveal the onset of significant imidazolate bond weakening in Co‐ZIF‐zni above 673 K. Melting can be controlled by tuning the metal–ligand and imidazole bonding strength as shown from thermal analysis of nine solid‐solution CoxZn1−x‐ZIF‐zni (x=0.3 to 0.003) MOFs, and a mere 4 % Co‐doping into Zn‐ZIF‐zni results in thermal decomposition instead of melting. The present findings demonstrate the key role of the metal–ligand bonds and imidazolate bonds in controlling the delicate balance between melting and decomposition processes in this class of ZIF compounds. [ABSTRACT FROM AUTHOR]

Quantum multireference effects are associated with degeneracies and near-degeneracies of the ground state and are critical to a variety of systems. Most approximate functionals of density functional theory (DFT) fail to properly describe such effects. A number of diagnostics have been proposed to estimate in advance the reliability of a given single-reference solution in this respect. Some of these diagnostics, however, lack size-consistency while remaining computationally expensive. In this work, we propose the DFT method of atomic populations of effectively localized electrons (APELE) as a novel diagnostic in this vein. It is compared with existing diagnostics of nondynamic correlation on select exemplary systems. The APELE method is on average in good agreement with the popular T1 index, while being size-consistent and less costly. It becomes particularly informative in cases involving bond stretching or bond breaking. The APELE method is applied next to organic diradicals like the bis-acridine dimer and the p-quinodimethane molecule which possess unusually high nonlinear optical response, and to the reaction of ethylene addition to Ni dithiolene. Our results for this reaction are consistent with the T1 diagnostics and in addition, shed some light on the degree of d-electron localization at the Ni center. [ABSTRACT FROM AUTHOR]

The crystal structure of new Mg9Ni6Ga14 and Mg3Ni2Ga compounds were investigated by single‐crystal diffraction. Both structures can be described as three‐core‐shell cluster compounds. In the Mg6Ni9Ga14 structure, the [Ni6Ga6] icosahedron is encapsulated within the [Mg20] dodecahedron, which is again encapsulated within a [Ni18Ga42] fullerene‐like truncated icosahedron, thus the three core–shell cluster [Ni6Ga6@Mg20@Ni18Ga42] results. In the Mg3Ni2Ga structure, the [Mg6] octahedron is encapsulated within the [Ni12Ga6] flattened icosahedron in vertices of which there are 12 nickel atoms, and six lateral edges are centered by gallium atoms, which in turn is encapsulated within a [Mg36] pseudo‐rhombicuboctahedron with 12 additional atoms centering the lateral faces; thus for Mg3Ni2Ga the three‐shell cluster is [Mg6@Ni12Ga6@Mg36]. [ABSTRACT FROM AUTHOR]

Getting students to understand the particulate nature of matter is a major challenge for chemistry education. In upper secondary school students commonly struggle to distinguish between intra- and intermolecular bonding and analyse chemical bonding in terms of electronegativity. In this study, we explore how creative drama may be used in chemistry education to facilitate students' explorations of electronegativity and chemical bonding in Swedish upper secondary chemistry education. The study was conducted as a design-based intervention in three cycles in two schools. The interventions (which lasted for 30–60 minutes) were single-lesson-interventions consisting of drama activities and discussions in whole-class and student groups. A qualitative content analysis produced themes that captured the ways in which the students explored electronegativity and chemical bonding and how creative drama enabled collective student agency. The findings indicate that creative drama enabled the students to link the electronegativity and polarity of molecules to formations of molecular grid structures using their own bodies to represent how molecules were organised in different states of matter. The results also indicate that creative drama in chemistry education may enhance student agency in their explorations of electronegativity and the linking of electronegativity to intramolecular and intermolecular bonding. [ABSTRACT FROM AUTHOR]

During clathrin-mediated endocytosis in yeast cells, short actin filaments (< 200nm) and crosslinking protein fimbrin assemble to drive the internalization of the plasma membrane. However, the organization of the actin meshwork during endocytosis remains largely unknown. In addition, only a small fraction of the force necessary to elongate and pinch off vesicles can be accounted for by actin polymerization alone. In this paper, we used mathematical modeling to study the self-organization of rigid actin filaments in the presence of elastic crosslinkers in conditions relevant to endocytosis. We found that actin filaments condense into either a disordered meshwork or an ordered bundle depending on filament length and the mechanical and kinetic properties of the crosslinkers. Our simulations also demonstrated that these nanometer-scale actin structures can store a large amount of elastic energy within the crosslinkers (up to 10kBT per crosslinker). This conversion of binding energy into elastic energy is the consequence of geometric constraints created by the helical pitch of the actin filaments, which results in frustrated configurations of crosslinkers attached to filaments. We propose that this stored elastic energy can be used at a later time in the endocytic process. As a proof of principle, we presented a simple mechanism for sustained torque production by ordered detachment of crosslinkers from a pair of parallel filaments. [ABSTRACT FROM AUTHOR]

It is generally recognized that insect odorant binding proteins (OBPs) mediate the solubilisation and transport of hydrophobic odorant molecules and contribute to the sensitivity of the insect olfactory system. However, the exact mechanism by which OBPs deliver odorants to olfactory receptors and their role, if any, as selectivity filters for specific odorants, are still a matter of debate. In the case of Anopheles gambiae, recent studies indicate that ligand discrimination is effected through the formation of heterodimers such as AgamOBP1 and AgamOBP4 (odorant binding proteins 1 and 4 from Anopheles gambiae). Furthermore, AgamOBPs have been reported to be promiscuous in binding more than one ligand simultaneously and repellents such as DEET (N,N-diethyl-3-toluamide) and 6-MH (6-methyl-5-hepten-2-one) interact directly with mosquito OBPs and/or compete for the binding of attractive odorants thus disrupting OBP heterodimerisation. In this paper, we propose mechanisms of action of DEET and 6-MH. We also predict that ligand binding can occur in several locations of AgamOBP1 with partial occupancies and propose structural features appropriate for repellent pharmacophores. [ABSTRACT FROM AUTHOR]

The crucial role of water in the engine of life have encouraged many researchers in studying, both theoretically and experimentally, the possible “structure” of water. Many properties of water have been related to the interplay between two distinct and interconverting structural species, namely the low-density water (LDW) and the high-density water (HDW). Supported by the results obtained with other aqueous solutions, this paper deals with the possibility of using the ultra-weak delayed luminescence (DL) to investigate water structuring in a mixture with glycerol, characterized only by hydrogen bonds between the various molecules. Spectral and temporal characteristics of DL decays give information on the two components of the mixture, by evidencing the contribution of water at glycerol concentrations close to the values used in cryopreservation. DL results have shown a correlation with LDW clusters size as determined by other researchers on the basis of neutron diffraction experiments and computational modelling, as reported in Literature. [ABSTRACT FROM AUTHOR]

It can be argued that electron correlation, as a concept, deserves the same prominence in general chemistry as molecular orbital theory. We show how it acts as Nature's "chemical glue" at both the molecular and supramolecular levels. Electron correlation can be presented in a general chemistry course in an at least somewhat intuitive manner. We also propose a simple classification of correlation effects based on their length scales and the size of the orbital gap (relative to the two‐electron integrals). In the discussion, we also show how DFT can shed light on wavefunction theory, and conversely. We discuss two types of "honorary valence orbitals", one related to small core‐valence gaps, the other to the ability of empty 3d orbitals in 2nd row elements to act as backbonding acceptors. Finally, we show why the pursuit of absolute total energies for their own sake becomes a sterile exercise, and why atomization energies are a more realistic "fix point". [ABSTRACT FROM AUTHOR]

One challenge in chemistry is the plethora of often disparate models for rationalizing the electronic structure of molecules. Chemical concepts abound, but their connections are often frail. This work describes a quantum‐mechanical framework that enables a combination of ideas from three approaches common for the analysis of chemical bonds: energy decomposition analysis (EDA), quantum chemical topology, and molecular orbital (MO) theory. The glue to our theory is the electron energy density, interpretable as one part electrons and one part electronegativity. We present a three‐dimensional analysis of the electron energy density and use it to redefine what constitutes an atom in a molecule. Definitions of atomic partial charge and electronegativity follow in a way that connects these concepts to the total energy of a molecule. The formation of polar bonds is predicted to cause inversion of electronegativity, and a new perspective of bonding in diborane and guanine−cytosine base‐pairing is presented. The electronegativity of atoms inside molecules is shown to be predictive of pKa. [ABSTRACT FROM AUTHOR]

After exploring the potential energy surfaces of MmCE2p (E=S−Te, M=Li−Cs, m=2, 3 and p=m‐2) and MnCE3q (E=S−Te, M=Li−Cs, n=1, 2, q=n‐2) combinations, we introduce 38 new global minima containing a planar hypercoordinate carbon atom (24 with a planar tetracoordinate carbon and 14 with a planar pentacoordinate carbon). These exotic clusters result from the decoration of V‐shaped CE22− and Y‐shaped CE32− dianions, respectively, with alkali counterions. All these 38 systems fulfill the geometrical and electronic criteria to be considered as true planar hypercoordinate carbon systems. Chemical bonding analyses indicate that carbon is covalently bonded to chalcogens and ionically connected to alkali metals. [ABSTRACT FROM AUTHOR]

Recombinant expression of proteins has become an indispensable tool in modern day research. The large yields of recombinantly expressed proteins accelerate the structural and functional characterization of proteins. Nevertheless, there are literature reported that the recombinant proteins show some differences in structure and function as compared with the native ones. Now there have been more than 100,000 structures (from both recombinant and native sources) publicly available in the Protein Data Bank (PDB) archive, which makes it possible to investigate if there exist any proteins in the RCSB PDB archive that have identical sequence but have some difference in structures. In this paper, we present the results of a systematic comparative study of the 3D structures of identical naturally purified versus recombinantly expressed proteins. The structural data and sequence information of the proteins were mined from the RCSB PDB archive. The combinatorial extension (CE), FATCAT-flexible and TM-Align methods were employed to align the protein structures. The root-mean-square distance (RMSD), TM-score, P-value, Z-score, secondary structural elements and hydrogen bonds were used to assess the structure similarity. A thorough analysis of the PDB archive generated five-hundred-seventeen pairs of native and recombinant proteins that have identical sequence. There were no pairs of proteins that had the same sequence and significantly different structural fold, which support the hypothesis that expression in a heterologous host usually could fold correctly into their native forms. [ABSTRACT FROM AUTHOR]

Embodied cognition theories view sensorimotor activity as fundamental to learning, knowing, and reasoning. To investigate the role of physical movement in conceptual learning, we developed and explored an Embodied Learning Interactive Chemistry environment (ELI‐Chem). The ELI‐Chem learning environment includes a computer simulation, a device for interacting with the simulation, and an online activity guide. In particular, we focused on the topic of chemical bonding—an abstract and nonintuitive phenomenon that is crucial to chemistry learning and that presents pervasive problems in learning. The ELI‐Chem learning environment embodies atoms' movement through four increasing degrees of bodily engagement in terms of range of motion and forces—movie, simulation, joystick, and haptic device (applies force feedback). A randomly assigned pretest‐intervention‐posttest four‐group comparison design was used with a mixed‐methods research approach. Quantitative analysis of pretest and posttest questionnaires tested the conceptual learning. Qualitative analysis of students' filled activity guides explored students' perceptions of the learning process and features of understanding. The participants were 48 high school chemistry students, 12 students in each degree of bodily engagement. During the activity, students were prompted to discover the forces underlying chemical bonding and to explore the energy changes involved. We found an increase in students' conceptual understanding in all four degrees of bodily engagement, with significantly higher learning gains and causal understanding in the haptic condition with a greater range of motion and forces. This study highlights the states in which embodied learning uniquely contributes to understanding and perception: absence of prior embodied experience, learning about a nonvisual concept related to forces, and a high congruence with the concept learned. [ABSTRACT FROM AUTHOR]

A novel antimicrobial agent polypentamethylene guanidine hydrochloride (PPMG) was prepared by melt polycondensation with pentamethylenediamine and guanidine hydrochloride. The effects of reaction conditions on the molecular structure of PPMG were investigated. In order to develop value‐added down fibers with efficient and durable antibacterial performance, PPMG was grafted onto down fibers using glutaric dialdehyde as the coupling agent. It was confirmed that PPMG was successfully grafted onto down fibers through chemical bonding, and the grafting efficiencies were above 80%. The inhibition rates against Escherichia coli and Staphylococcus aureus of the modified down fibers reached over 99.9%, and such antimicrobial properties were still maintained after 20 washings with water or detergent. [ABSTRACT FROM AUTHOR]

Our gargantuan ab initio all-electron fully relativistic Dirac–Fock (DF), nonrelativistic (NR) Hartree–Fock (HF) and Dirac–Fock-Breit-Gaunt (DFBG) molecular SCF calculations for the superheavy octahedral oganesson hexatenniside OgTs6 predict atomization energies (AEs) of 9.49, −5.54 and 9.37 eV, at the optimized Og-Ts bond distances of 3.35, 3.44 and 3.36 Å, respectively. There are dramatic effects of relativity for the atomization energy for OgTs6 (with seven superheavy atoms and 820 electrons) of ~15.0 eV at both the DF and DFBG levels of theory. Our calculated energies of reaction for the superheavy reaction Og + 3Ts2 → OgTs6 at the NR, DF and DFBG levels of the theory are exoergic by 8.81, 6.33 and 6.26 eV, respectively. The contribution to dispersion interactions increases the DFBG reaction energy for Og + 3Ts2 → OgTs6 by 0.94–7.20 eV. The AEs of OgTs6 to form Og + 6Ts are calculated to be −5.54 at the NR level of theory (that is, OgTs6 is unstable relative to the sum of the NR energies of its constituent atoms) and 9.49 and 9.37 eV at the DF and DFBG levels of theory, respectively. Dispersion interactions increase the AE(DFBG) by 1.30–10.67 eV. Ours are the first dispersion interaction corrected calculations for OgTs6 with seven superheavy atoms and 820 electrons. Mulliken population analysis (MPA) as implemented in the DIRAC code for our DF and NR calculations (using the dyall.cv4z basis) yields the charges Og+0.60 and Og+0.96, respectively, on the central Og atom indicating that our relativistic DF calculations predict octahedral OgTs6 to be less ionic compared to our NR HF calculations. However, due caution must be used to interpret the results of MPA, which are highly basis set dependent. [ABSTRACT FROM AUTHOR]

Off‐nucleus isotropic magnetic shielding (σiso(r)) and multi‐points nucleus independent chemical shift (NICS(0‐2 Å)) index were utilized to find the impacts of the isomerization of gas‐phase furfuraldehyde (FD) on bonding and aromaticity of FD. Multidimensional (1D to 3D) grids of ghost atoms (bqs) were used as local magnetic probes to evaluate σiso(r) through gauge‐including atomic orbitals (GIAO) at density functional theory (DFT) and B3LYP functional/6‐311+G(d,p) basis set level of theory. 1D σiso(r) responses along each bond of FD were examined. Also, a σiso(r) 2D‐scan was performed to obtain σiso(r) behavior at vertical heights of 0–1 Å above the FD plane in its cis, transition state (TS) and trans forms. New techniques for evaluating 2D σiso(r) cross‐sections are also included. Our findings showed that bonds in cyclic and acyclic parts of FD are dissimilar. Unlike the C−O bond of furanyl, the C=O bond of the formyl group is magnetically different. C−C and C−H bonds in furanyl are found similar to those in aromatic rings. A unique σiso(r) trend was observed for the C2−C6 bond during FD isomerization. Based on NICS(0‐2 Å) values, the degree of aromaticity follows the order of cis FD