26 results on '"Li, Guotian"'
Search Results
2. Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies.
- Author
-
Li, Guotian, Jain, Rashmi, Chern, Mawsheng, Pham, Nikki T., Martin, Joel A., Wei, Tong, Schackwitz, Wendy S., Lipzen, Anna M., Duong, Phat Q., Jones, Kyle C., Jiang, Liangrong, Ruan, Deling, Bauer, Diane, Peng, Yi, Barry, Kerrie W., Schmutz, Jeremy, and Ronald, Pamela C.
- Subjects
- *
GENOMICS , *GERMPLASM , *NUCLEOTIDE sequencing , *GENETIC mutation , *FUNCTIONAL analysis - Abstract
The availability of a whole-genome sequenced mutant population and the cataloging of mutations of each line at a single-nucleotide resolution facilitate functional genomic analysis. To this end, we generated and sequenced a fast-neutron-induced mutant population in the model rice cultivar Kitaake (Oryza sativa ssp japonica), which completes its life cycle in 9 weeks. We sequenced 1504 mutant lines at 45-fold coverage and identified 91,513 mutations affecting 32,307 genes, i.e. 58% of all rice genes. We detected an average of 61 mutations per line. Mutation types include single-base substitutions, deletions, insertions, inversions, translocations, and tandem duplications. We observed a high proportion of loss-of-function mutations. We identified an inversion affecting a single gene as the causative mutation for the short-grain phenotype in one mutant line. This result reveals the usefulness of the resource for efficient, cost-effective identification of genes conferring specific phenotypes. To facilitate public access to this genetic resource, we established an open access database called KitBase that provides access to sequence data and seed stocks. This population complements other available mutant collections and gene-editing technologies. This work demonstrates how inexpensive next-generation sequencing can be applied to generate a high-density catalog of mutations. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
3. MST50 is involved in multiple MAP kinase signaling pathways in Magnaporthe oryzae.
- Author
-
Li, Guotian, Zhang, Xue, Tian, Huan, Choi, Yoon ‐ E, Tao, W. Andy, and Xu, Jin ‐ Rong
- Subjects
- *
ADAPTOR proteins , *PYRICULARIA oryzae , *MITOGEN-activated protein kinases , *OXIDATIVE stress , *HISTIDINE kinases - Abstract
Appressorium formation plays a critical role in Magnaporthe oryzae. Mst50 is an adapter protein of the Mst11-Mst7-Pmk1 cascade that is essential for appressorium formation. To further characterize its functions, affinity purification was used to identify Mst50-interacting proteins (MIPs) in this study. Two of the MIPs are Mst11 and Mst7 that are known to interact with Mst50 for Pmk1 activation. Surprisingly, two other MIPs are Mck1 and Mkk2 that are the upstream kinases of the Mps1 pathway. Domain deletion analysis showed that the sterile alpha-motif of Mst50 but not the Ras-association domain was important for its interaction with Mck1 and responses to cell wall and oxidative stresses. The mst50 mutant was reduced in Mps1 activation under stress conditions. MIP11 encodes a RACK1 protein that also interacted with Mck1. Deletion of MIP11 resulted in defects in cell wall integrity, Mps1 phosphorylation and plant infection. Furthermore, Mst50 interacted with histidine kinase Hik1, and the mst50 mutant was reduced in Osm1 phosphorylation. These results indicated that Mst50 is involved in all three MAPK pathways in M. oryzae although its functions differ in each pathway. Several MIPs are conserved hypothetical proteins and may be involved in responses to various signals and crosstalk among signaling pathways. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
4. Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation.
- Author
-
Li, Guotian, Chern, Mawsheng, Jain, Rashmi, Martin, Joel A., Schackwitz, Wendy S., Jiang, Liangrong, Vega-Sánchez, Miguel E., Lipzen, Anna M., Barry, Kerrie W., Schmutz, Jeremy, and Ronald, Pamela C.
- Subjects
- *
FAST neutrons , *PLANT DNA - Abstract
The article focuses on the genome-wide characterization of mutation of 41 Fast-Neutron (FN) rice mutant lines, while mentioning that the genomic DNA isolated from a single plant used in sequencing, and also mentions that diversity of mutations can be represented by FN irradiation.
- Published
- 2016
- Full Text
- View/download PDF
5. Activation of the signalling mucin MoMsb2 and its functional relationship with Cbp1 in M agnaporthe oryzae.
- Author
-
Wang, Guanghui, Li, Guotian, Zhang, Shijie, Jiang, Cong, Qin, Jun, and Xu, Jin ‐ Rong
- Subjects
- *
MUCINS , *CELLULAR signal transduction , *MITOGEN-activated protein kinases , *ENZYME activation , *APPRESSORIA , *ASCOMYCETES , *FUNGI - Abstract
Various surface signals are recognized by M agnaporthe oryzae to activate the Pmk1 MAP kinase that is essential for appressorium formation and invasive growth. One of upstream sensors of the Pmk1 pathway is the MoMsb2 signalling mucin. However, the activation of MoMsb2 and its relationship with other sensors is not clear. In this study, we showed that the cleavage and transmembrane domains are essential for MoMsb2 functions. Cleavage of MoMsb2 was further confirmed by western blot analysis, and five putative cleavage sites were functionally characterized. Expression of the extracellular region alone partially rescued the defects of M omsb2 in appressorium formation and virulence. The cytoplasmic region of MoMsb2, although dispensable for appressorium formation, was more important for penetration and invasive growth. Interestingly, the M omsb2 cbp1 double mutant deleted of both mucin genes was blocked in Pmk1 activation. It failed to form appressoria on artificial surfaces and was non-pathogenic. In addition, we showed that MoMsb2 interacts with Ras2 but not with MoCdc42 in co-immunoprecipitation assays. Overall, results from this study indicated that the extracellular and cytoplasmic regions of MoMsb2 have distinct functions in appressorium formation, penetration and invasive growth, and MoMsb2 has overlapping functions with Cbp1 in recognizing environmental signals for Pmk1 activation. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
6. Genetic control of infection-related development in Magnaporthe oryzae
- Author
-
Li, Guotian, Zhou, Xiaoying, and Xu, Jin-Rong
- Subjects
- *
VIRUS diseases of plants , *GENETIC regulation , *PATHOGENIC fungi , *FOOD security , *LIFE cycles (Biology) , *CELLULAR signal transduction , *MITOGEN-activated protein kinases , *PYRICULARIA grisea - Abstract
Diseases caused by various pathogenic fungi pose a serious threat to global food security. Despite their differences in life cycles, fungal pathogens use well-conserved genetic mechanisms to regulate different developmental and infection processes. This review focuses on the key signaling pathways and recent advances in Magnaporthe oryzae, which is a model for studying fungal–plant interactions. In addition to the core components, a number of upstream genes and downstream targets of the cAMP–PKA and mitogen-activated protein (MAP) pathways have been identified. Recent advances in studies with cytoskeleton organization, effector biology, and ROS signaling in M. oryzae and future directions also are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
7. Trans-crop applications of atypical R genes for multipathogen resistance.
- Author
-
Sun, Peng, Han, Xinyu, Milne, Ricky J., and Li, Guotian
- Subjects
- *
DISEASE resistance of plants , *RECEPTOR-like kinases , *PLANT genes , *MOLECULAR cloning , *CROP improvement - Abstract
Broad-spectrum disease resistance is more often conferred by atypical R genes than typical R genes. Atypical R genes are important for a holistic understanding of plant immunity. New resources and technologies facilitate the cloning, characterization, and engineering of atypical R genes. Atypical R proteins are promising candidates for trans-crop applications. Genetic resistance to plant diseases is essential for global food security. Significant progress has been achieved for plant disease-resistance (R) genes comprising nucleotide-binding domain, leucine-rich repeat-containing receptors (NLRs), and membrane-localized receptor-like kinases or proteins (RLKs/RLPs), which we refer to as typical R genes. However, there is a knowledge gap in how non-receptor-type or atypical R genes contribute to plant immunity. Here, we summarize resources and technologies facilitating the study of atypical R genes, examine diverse atypical R proteins for broad-spectrum resistance, and outline potential approaches for trans-crop applications of atypical R genes. Studies of atypical R genes are important for a holistic understanding of plant immunity and the development of novel strategies in disease control and crop improvement. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
8. Fine-tuning phosphatidic acid production for optimal plant stress responses.
- Author
-
Gong, Qiuwen, Yao, Shuaibing, Wang, Xuemin, and Li, Guotian
- Subjects
- *
PHOSPHATIDIC acids , *ABIOTIC stress , *DISEASE resistance of plants , *GENOME editing , *LIPIDOMICS - Abstract
Phosphatidic acid (PA) is involved in biotic and abiotic stress responses in plants. Here, we summarize quantitative lipidomics and real-time imaging used in PA studies and highlight recent studies of diacylglycerol (DAG) kinase (DGK) 5, an enzyme involved in PA biosynthesis, facilitating fine-tuning PA production for optimal stress responses in plants. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
9. Rational modification of melatonin for broad‐spectrum antifungal agents discovery.
- Author
-
Cai, Huanyu, Li, Renjian, Chen, Yu, Bi, Ruiqing, Fang, Xueru, Wu, Peng, Xu, Weilong, Bao, Longzhu, Liu, Zhu, Li, Jun, Li, Guotian, and Teng, Huailong
- Subjects
- *
ANTIFUNGAL agents , *RICE diseases & pests , *RICE blast disease , *MITOGEN-activated protein kinases , *SURFACE plasmon resonance , *PLANT diseases , *PROTEIN kinases - Abstract
Natural products, known for their environmental safety, are regarded as a significant basis for the modification and advancement of fungicides. Melatonin, as a low‐cost natural indole, exhibits diverse biological functions, including antifungal activity. However, its potential as an antifungal agent has not been fully explored. In this study, a series of melatonin derivatives targeting the mitogen‐activated protein kinase (Mps1) protein of fungal pathogens were synthesized based on properties of melatonin, among which the trifluoromethyl‐substituted derivative Mt‐23 exhibited antifungal activity against seven plant pathogenic fungi, and effectively reduced the severity of crop diseases, including rice blast, Fusarium head blight of wheat and gray mold of tomato. In particular, its EC50 (5.4 µM) against the rice blast fungus Magnaporthe oryzae is only one‐fourth that of isoprothiolane (22 µM), a commercial fungicide. Comparative analyzes revealed that Mt‐23 simultaneously targets the conserved protein kinase Mps1 and lipid protein Cap20. Surface plasmon resonance assays showed that Mt‐23 directly binds to Mps1 and Cap20. In this study, we provide a strategy for developing antifungal agents by modifying melatonin, and the resultant melatonin derivative Mt‐23 is a commercially valuable, eco‐friendly and broad‐spectrum antifungal agent to combat crop disease. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
10. Knockout of phosphatidate phosphohydrolase genes confers broad‐spectrum disease resistance in plants.
- Author
-
Gong, Qiuwen, Sha, Gan, Han, Xinyu, Guo, Zhenhua, Yang, Lei, Chen, Ting, Yang, Wei, Tan, Ronglei, Liu, Meng, Xia, Fengdie, Chen, Guang, Li, Yufei, Shen, Xin, Xie, Kabin, Cai, Guangqin, Hu, Honghong, Luo, Jie, Li, Qiang, and Li, Guotian
- Subjects
- *
SECOND messengers (Biochemistry) , *PHOSPHATIDATE phosphatase , *AGRICULTURE , *DISEASE resistance of plants , *RICE blast disease , *RICE diseases & pests - Abstract
The article explores the impact of knocking out phosphatidate phosphohydrolase (PAH) genes in plants, specifically rice and Arabidopsis. The researchers discovered that this knockout resulted in the accumulation of phosphatidic acid (PA), which in turn enhanced the plants' resistance to various pathogens. The study also revealed that PAHs are present in a wide range of plants and play a role in plant defense. The findings suggest that targeting PAH genes could be a promising approach for developing disease-resistant crops. Additionally, the researchers found that while the knockout of PAH genes improved resistance to pathogens, it also hindered plant growth. They identified changes in gene expression and lipid metabolism associated with the knockout, indicating that manipulating PAH genes could potentially enhance plant resistance without compromising yield. [Extracted from the article]
- Published
- 2024
- Full Text
- View/download PDF
11. Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9–1.
- Author
-
Jiang, Liangrong, Li, Guotian, Chern, Mawsheng, Jain, Rashmi, Pham, Nhan T., Martin, Joel A., Schackwitz, Wendy S., Zhao, Juan, Ruan, Deling, Huang, Rongyu, Zheng, Jingsheng, and Ronald, Pamela C.
- Subjects
- *
GRAIN size , *ACID deposition , *GRAIN , *RICE , *MOLECULAR cloning , *GIBBERELLIC acid - Abstract
Background: Breeding for genes controlling key agronomic traits is an important goal of rice genetic improvement. To gain insight into genes controlling grain morphology, we screened M3 plants derived from 1,000 whole-genome sequenced (WGS) M2 Kitaake mutants to identify lines with altered grain size. Results: In this study, we isolated a mutant, named fast-neutron (FN) 60–4, which exhibits a significant reduction in grain size. We crossed FN60–4 with the parental line Kitaake and analyzed the resulting backcross population. Segregation analysis of 113 lines from the BC2F2 population revealed that the mutant phenotype is controlled by a single semi-dominant locus. Mutant FN60–4 is reduced 20% in plant height and 8.8% in 1000-grain weight compared with Kitaake. FN60–4 also exhibits an 8% reduction in cell number and a 9% reduction in cell length along the vertical axis of the glume. We carried out whole-genome sequencing of DNA pools extracted from segregants with long grains or short grains, and revealed that one gene, LOC_Os09g02650, cosegregated with the grain size phenotype in the BC1F2 and BC2F2 populations. This mutant allele was named grain shape 9–1 (gs9–1). gs9–1 carries a 3-bp deletion that affects two amino acids. This locus is a new allele of the BC12/GDD1/MTD1 gene that encodes a kinesin-like protein involved in cell-cycle progression, cellulose microfibril deposition and gibberellic acid (GA) biosynthesis. The GA biosynthesis-related gene KO2 is down-regulated in gs9–1. The dwarf phenotype of gs9–1 can be rescued by adding exogenous GA3. In contrast to the phenotypes for the other alleles, the gs9–1 is less severe, consistent with the nature of the mutation, which does not disrupt the open reading frame as observed for the other alleles. Conclusions: In this study, we isolated a mutant, which exhibits altered grain shape and identified the mutated gene, gs9–1. Our study reveals that gs9–1 is a semi-dominant gene that carries a two-amino acid mutation. gs9–1 is allelic to the BC12/GDD1/MTD1 gene involved in GA biosynthesis. These results demonstrate the efficiency and convenience of cloning genes from the whole-genome sequenced Kitaake mutant population to advance investigations into genes controlling key agronomic traits in rice. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
12. Mutation of OsCDS5 confers broad‐spectrum disease resistance in rice.
- Author
-
Sun, Qiping, Xiao, Yongxin, Song, Le, Yang, Lei, Wang, Yin, Yang, Wei, Yang, Qun, Xie, Kabin, Yuan, Meng, and Li, Guotian
- Subjects
- *
RICE diseases & pests , *NATURAL immunity , *RICE blast disease , *GENETIC engineering , *ABIOTIC stress , *BLIGHT diseases (Botany) , *PLANT resistance to viruses - Abstract
Phospholipids are important components of biological membranes, participating in various biological processes, including plant development and responses to biotic and abiotic stresses. A previous study showed that mutation of the rice OsCDS5 (CDP‐DAG Synthase) gene alters lipid metabolism, causing enhanced abiotic stress responses, yellowing of leaves at the seedling stage and delayed plant development. Here, we observed that the Oscds5 mutant shows enhanced resistance to rice blast, bacterial blight and bacterial leaf streak. Mutation of OsCDS5 promotes production of reactive oxygen species and increases the expression level of multiple defence‐related genes. Transcriptomic analyses indicate that genes involved in responses to stress, biotic/abiotic stimuli and metabolic processes are highly upregulated and enriched in mutant Oscds5. Metabolomic analyses showed that differential metabolites were enriched in the lipid metabolic and tryptophan metabolic pathways. The decreased level of phosphatidylinositol and increased level of serotonin probably contribute to enhanced disease resistance of the Oscds5 mutant. Taken together, mutation of OsCDS5 enhances abiotic and biotic stress responses, and OsCDS5 may be a promising target for genetic engineering to enhance the resilience of rice to abiotic and biotic stresses simultaneously. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
13. Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification.
- Author
-
Li, Guotian, Jones, Kyle C., Eudes, Aymerick, Pidatala, Venkataramana R., Sun, Jian, Xu, Feng, Zhang, Chengcheng, Wei, Tong, Jain, Rashmi, Birdseye, Devon, Canlas, Patrick E., Baidoo, Edward E. K., Duong, Phat Q., Sharma, Manoj K., Singh, Seema, Ruan, Deling, Keasling, Jay D., Mortimer, Jenny C., Loqué, Dominique, and Bartley, Laura E.
- Subjects
- *
ACYLTRANSFERASE genetics , *ACYLTRANSFERASES , *SWITCHGRASS , *LIGNOCELLULOSE , *BIOMASS energy - Abstract
Background: Switchgrass (Panicum virgatum L.) is a promising bioenergy feedstock because it can be grown on marginal land and produces abundant biomass. Recalcitrance of the lignocellulosic components of the switchgrass cell wall to enzymatic degradation into simple sugars impedes efficient biofuel production. We previously demonstrated that overexpression of OsAT10, a BAHD acyltransferase gene, enhances saccharification efficiency in rice. Results: Here we show that overexpression of the rice OsAT10 gene in switchgrass decreased the levels of cell wall-bound ferulic acid (FA) in green leaf tissues and to a lesser extent in senesced tissues, and significantly increased levels of cell wall-bound p-coumaric acid (p-CA) in green leaves but decreased its level in senesced tissues of the T0 plants under greenhouse conditions. The engineered switchgrass lines exhibit an approximate 40% increase in saccharification efficiency in green tissues and a 30% increase in senesced tissues. Conclusion: Our study demonstrates that overexpression of OsAT10, a rice BAHD acyltransferase gene, enhances saccharification of lignocellulosic biomass in switchgrass. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
14. Melatonin targets MoIcl1 and works synergistically with fungicide isoprothiolane in rice blast control.
- Author
-
Bi, Ruiqing, Li, Renjian, Xu, Zhenyi, Cai, Huanyu, Zhao, Juan, Zhou, Yaru, Wu, Bangting, Sun, Peng, Yang, Wei, Zheng, Lu, Chen, Xiao‐Lin, Luo, Chao‐Xi, Teng, Huailong, Li, Qiang, and Li, Guotian
- Subjects
- *
RICE diseases & pests , *RICE blast disease , *FUNGICIDES , *FUNGICIDE resistance , *PLANT diseases , *MELATONIN - Abstract
Melatonina natural harmless molecule—displays versatile roles in human health and crop disease control such as for rice blast. Rice blast, caused by the filamentous fungus Magnaporthe oryzae, is one devastating disease of rice. Application of fungicides is one of the major measures in the control of various crop diseases. However, fungicide resistance in the pathogen and relevant environmental pollution are becoming serious problems. By screening for possible synergistic combinations, here, we discovered an eco‐friendly combination for rice blast control, melatonin, and the fungicide isoprothiolane. These compounds together exhibited significant synergistic inhibitory effects on vegetative growth, conidial germination, appressorium formation, penetration, and plant infection by M. oryzae. The combination of melatonin and isoprothiolane reduced the effective concentration of isoprothiolane by over 10‐fold as well as residual levels of isoprothiolane. Transcriptomics and lipidomics revealed that melatonin and isoprothiolane synergistically interfered with lipid metabolism by regulating many common targets, including the predicted isocitrate lyase‐encoding gene MoICL1. Furthermore, using different techniques, we show that melatonin and isoprothiolane interact with MoIcl1. This study demonstrates that melatonin and isoprothiolane function synergistically and can be used to reduce the dosage and residual level of isoprothiolane, potentially contributing to the environment‐friendly and sustainable control of crop diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
15. Doxorubicin inhibits phosphatidylserine decarboxylase and confers broad‐spectrum antifungal activity.
- Author
-
Zhou, Yaru, Zhao, Juan, Yang, Lei, Bi, Ruiqing, Qin, Ziting, Sun, Peng, Li, Renjian, Zhao, Mengfei, Wang, Yin, Chen, Guang, Wan, Hu, Zheng, Lu, Chen, Xiao‐Lin, Wang, Guanghui, Li, Qiang, and Li, Guotian
- Subjects
- *
PYRICULARIA oryzae , *PHOSPHATIDYLSERINES , *RICE blast disease , *PHYTOPATHOGENIC microorganisms , *PHYTOPATHOGENIC fungi , *PLANT diseases , *DOXORUBICIN , *ORNITHINE decarboxylase - Abstract
Summary: As phospholipids of cell membranes, phosphatidylethanolamine (PE) and phosphatidylserine (PS) play crucial roles in glycerophospholipid metabolism. Broadly, some phospholipid biosynthesis enzymes serve as potential fungicide targets. Therefore, revealing the functions and mechanism of PE biosynthesis in plant pathogens would provide potential targets for crop disease control.We performed analyses including phenotypic characterizations, lipidomics, enzyme activity, site‐directed mutagenesis, and chemical inhibition assays to study the function of PS decarboxylase‐encoding gene MoPSD2 in rice blast fungus Magnaporthe oryzae.The Mopsd2 mutant was defective in development, lipid metabolism, and plant infection. The PS level increased while PE decreased in Mopsd2, consistent with the enzyme activity. Furthermore, chemical doxorubicin inhibited the enzyme activity of MoPsd2 and showed antifungal activity against 10 phytopathogenic fungi including M. oryzae and reduced disease severity of two crop diseases in the field. Three predicted doxorubicin‐interacting residues are important for MoPsd2 functions.Our study demonstrates that MoPsd2 is involved in de novo PE biosynthesis and contributes to the development and plant infection of M. oryzae and that doxorubicin shows broad‐spectrum antifungal activity as a fungicide candidate. The study also implicates that bacterium Streptomyces peucetius, which biosynthesizes doxorubicin, could be potentially used as an eco‐friendly biocontrol agent. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
16. Melatonin functions as a broad‐spectrum antifungal by targeting a conserved pathogen protein kinase.
- Author
-
Li, Renjian, Bi, Ruiqing, Cai, Huanyu, Zhao, Juan, Sun, Peng, Xu, Weilong, Zhou, Yaru, Yang, Wei, Zheng, Lu, Chen, Xiao‐Lin, Wang, Guanghui, Wang, Dongli, Liu, Junfeng, Teng, Huailong, and Li, Guotian
- Subjects
- *
MITOGEN-activated protein kinases , *SURFACE plasmon resonance , *MELATONIN , *PROTEIN kinases , *RICE blast disease , *PHYTOPATHOGENIC microorganisms , *INDOLE - Abstract
Melatonin is a low‐cost natural small indole molecule with versatile biological functions. However, melatonin's fungicidal potential has not been fully exploited, and the mechanism remains elusive. Here, we report that melatonin broadly inhibited 13 plant pathogens. In the rice blast fungal pathogen Magnaporthe oryzae, melatonin inhibited fungal growth, formation of infection‐specific structures named appressoria, and plant infection, reducing disease severity. Melatonin entered fungal cells efficiently and colocalized with the critical mitogen‐activated protein kinase named Mps1, suppressing phosphorylation of Mps1. Melatonin's affinity for Mps1 via two hydrogen bonds was demonstrated using surface plasmon resonance and chemical modifications. To improve melatonin's efficiency, we obtained 20 melatonin derivatives. Tert‐butyloxycarbonyl melatonin showed a 25‐fold increase in fungicidal activities, demonstrating the feasibility of chemical modifications in melatonin modification. Our study demonstrated the broad‐spectrum fungicidal effect of melatonin by suppressing Mps1 as one of the targets. Through further systematic modifications, developing an eco‐friendly melatonin derivative of commercial values for agricultural applications appears promising. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
17. Roles of Rack1 Proteins in Fungal Pathogenesis.
- Author
-
Zhang, Xue, Jain, Rashmi, and Li, Guotian
- Subjects
- *
ASPERGILLUS , *CANDIDA albicans , *CELL receptors , *CYCLIC adenylic acid , *BIOLOGICAL evolution , *FUNGI , *GENETICS , *MYCOSES , *PROTEIN kinases , *PROTEINS - Abstract
Pathogenic fungi cause diseases on various organisms. Despite their differences in life cycles, fungal pathogens use well-conserved proteins and pathways to regulate developmental and infection processes. In this review, we focus on Rack1, a multifaceted scaffolding protein involved in various biological processes. Rack1 is well conserved in eukaryotes and plays important roles in fungi, though limited studies have been conducted. To accelerate the study of Rack1 proteins in fungi, we review the functions of Rack1 proteins in model and pathogenic fungi and summarize recent progress on how Rack1 proteins are involved in fungal pathogenesis. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
18. Genomic and transcriptomic analyses of the elite rice variety Huizhan provide insight into disease resistance and heat tolerance.
- Author
-
Yang, Wei, Yang, Zhou, Yang, Lei, Li, Zheng, Zhang, Zhaowu, Wei, Tong, Huang, Renliang, and Li, Guotian
- Subjects
- *
GENE families , *GENOMICS , *CHROMOSOME inversions , *CLIMATE change , *COMPARATIVE genomics , *RICE blast disease , *HYBRID rice , *RICE - Abstract
The indica rice variety Huizhan shows elite traits of disease resistance and heat tolerance. However, the underlying genetic basis of these traits is not fully understood due to limited genomic resources. Here, we used Nanopore long-read and next-generation sequencing technologies to generate a chromosome-scale genome assembly of Huizhan. Comparative genomics analysis uncovered a large chromosomal inversion and expanded gene families that are associated with plant growth, development and stress responses. Functional rice blast resistance genes, including Pi2 , Pib and Ptr , and bacterial blight resistance gene Xa27 , contribute to disease resistance of Huizhan. Furthermore, integrated genomics and transcriptomics analyses showed that OsHIRP1 , OsbZIP60 , the SOD gene family, and various transcription factors are involved in heat tolerance of Huizhan. The high-quality genome assembly and comparative genomics results presented in this study facilitate the use of Huizhan as an elite parental line in developing rice varieties adapted to disease pressure and climate challenges. • A chromosome-scale genome of Huizhan, a disease-resistant and heat-tolerant indica rice variety, was assembled. • The genome was analyzed and compared to the genomes of other rice varieties and wild relatives. • Rice blast resistance genes Pi2 , Pib and Ptr and bacterial blight resistance gene Xa27 contribute to disease resistance. • OsHIRP1 , OsbZIP60 , the SOD gene family, and various transcription factors are involved in heat tolerance of Huizhan. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
19. A secreted fungal effector suppresses rice immunity through host histone hypoacetylation.
- Author
-
Chen, Xiaoyang, Duan, Yuhang, Qiao, Fugang, Liu, Hao, Huang, Junbin, Luo, Chaoxi, Chen, Xiaolin, Li, Guotian, Xie, Kabin, Hsiang, Tom, and Zheng, Lu
- Subjects
- *
RICE , *HISTONE acetylation , *HISTONE deacetylase , *PLANT gene silencing , *PHYTOPATHOGENIC microorganisms , *DISEASE resistance of plants , *HISTONES - Abstract
Summary: Histone acetylation is a critical epigenetic modification that regulates plant immunity. Fungal pathogens secrete effectors that modulate host immunity and facilitate infection, but whether fungal pathogens have evolved effectors that directly target plant histone acetylation remains unknown.Here, we identified a secreted protein, UvSec117, from the rice false smut fungus, Ustilaginoidea virens, as a key effector that can target the rice histone deacetylase OsHDA701 and negatively regulates rice broad‐spectrum resistance against rice pathogens. UvSec117 disrupts host immunity by recruiting OsHDA701 to the nucleus and enhancing OsHDA701‐modulated deacetylation, thereby reducing histone H3K9 acetylation levels in rice plants and interfering with defense gene activation.Host‐induced gene silencing of UvSec117 promotes rice resistance to U. virens, thus providing an alternative way for developing rice false smut‐resistant plants.This is the first direct evidence demonstrating that a fungal effector targets a histone deacetylase to suppress plant immunity. Our data provided insight into a counter‐defense mechanism in a plant pathogen that inactivates host defense responses at the epigenetic level. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
20. The MADS-box transcription factor FgMcm1 regulates cell identity and fungal development in F usarium graminearum.
- Author
-
Yang, Cui, Liu, Huiquan, Li, Guotian, Liu, Meigang, Yun, Yingzi, Wang, Chenfang, Ma, Zhonghua, and Xu, Jin ‐ Rong
- Subjects
- *
TRANSCRIPTION factors , *FUNGAL development , *GENETIC regulation , *FUSARIUM , *WHEAT diseases & pests , *FUNGAL mutation , *FUNGI - Abstract
In eukaryotic cells, MADS-box genes are known to play major regulatory roles in various biological processes by combinatorial interactions with other transcription factors. In this study, we functionally characterized the FgMCM1 MADS-box gene in F usarium graminearum, the causal agent of wheat and barley head blight. Deletion of FgMCM1 resulted in the loss of perithecium production and phialide formation. The F gmcm1 mutant was significantly reduced in virulence, deoxynivalenol biosynthesis and conidiation. In yeast two-hybrid assays, FgMcm1 interacted with Mat1-1-1 and Fst12, two transcription factors important for sexual reproduction. Whereas F gmcm1 mutants were unstable and produced stunted subcultures, F gmcm1 mat1-1-1 but not F gmcm1 fst12 double mutants were stable. Furthermore, spontaneous suppressor mutations occurred frequently in stunted subcultures to recover growth rate. Ribonucleic acid sequencing analysis indicated that a number of sexual reproduction-related genes were upregulated in stunted subcultures compared with the F gmcm1 mutant, which was downregulated in the expression of genes involved in pathogenesis, secondary metabolism and conidiation. We also showed that culture instability was not observed in the F vmcm1 mutants of the heterothallic F usarium verticillioides. Overall, our data indicate that FgMcm1 plays a critical role in the regulation of cell identity, sexual and asexual reproduction, secondary metabolism and pathogenesis in F . graminearum. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
21. Deubiquitinase Ubp3 regulates ribophagy and deubiquitinates Smo1 for appressorium‐mediated infection by Magnaporthe oryzae.
- Author
-
Cai, Xuan, Xiang, Shikun, He, Wenhui, Tang, Mengxi, Zhang, Shimei, Chen, Deng, Zhang, Xinrong, Liu, Caiyun, Li, Guotian, Xing, Junjie, Li, Yunfeng, Chen, Xiao‐Lin, and Nie, Yanfang
- Subjects
- *
DEUBIQUITINATING enzymes , *LIPID metabolism , *INFECTION , *RAPAMYCIN , *GLYCOGEN - Abstract
The Ubp family of deubiquitinating enzymes has been found to play important roles in plant‐pathogenic fungi, but their regulatory mechanisms are still largely unknown. In this study, we revealed the regulatory mechanism of the deubiquitinating enzyme Ubp3 during the infection process of Magnaporthe oryzae. AUBP3 deletion mutant was severely defective in appressorium turgor accumulation, leading to the impairment of appressorial penetration. During appressorium formation, the mutant was also defective in glycogen and lipid metabolism. Interestingly, we found that nitrogen starvation and rapamycin treatment induced the ribophagy process in M. oryzae, which is closely dependent on Ubp3. In the ∆ubp3 mutant, the ribosome proteins and rRNAs were not well degraded on nitrogen starvation and rapamycin treatment. We also found that Ubp3 interacted with the GTPase‐activating protein Smo1 and regulated its de‐ubiquitination. Ubp3‐dependent de‐ubiquitination of Smo1 may be required for Smo1 to coordinate Ras signalling. Taken together, our results showed at least two roles of Ubp3 in M. oryzae: it regulates the ribophagy process and it regulates de‐ubiquitination of GTPase‐activating protein Smo1 for appressorium‐mediated infection. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
22. The MoPah1 phosphatidate phosphatase is involved in lipid metabolism, development, and pathogenesis in Magnaporthe oryzae.
- Author
-
Zhao, Juan, Sun, Peng, Sun, Qiping, Li, Renjian, Qin, Ziting, Sha, Gan, Zhou, Yaru, Bi, Ruiqing, Zhang, Haifeng, Zheng, Lu, Chen, Xiao‐Lin, Yang, Long, Li, Qiang, and Li, Guotian
- Subjects
- *
PHOSPHATIDATE phosphatase , *LIPID metabolism , *RICE blast disease , *MITOGEN-activated protein kinases , *TRANSCRIPTION factors , *PHOSPHATIDIC acids - Abstract
As with the majority of the hemibiotrophic fungal pathogens, the rice blast fungus Magnaporthe oryzae uses highly specialized infection structures called appressoria for plant penetration. Appressoria differentiated from germ tubes rely on enormous turgor pressure to directly penetrate the plant cell, in which process lipid metabolism plays a critical role. In this study, we characterized the MoPAH1 gene in M. oryzae, encoding a putative highly conserved phosphatidate phosphatase. The expression of MoPAH1 was up‐regulated during plant infection. The MoPah1 protein is expressed at all developmental and infection stages, and is localized to the cytoplasm. Disruption of MoPAH1 causes pleiotropic defects in vegetative growth, sporulation, and heat tolerance. The lipid profile is significantly altered in the Mopah1 mutant. Lipidomics assays showed that the level of phosphatidic acid (PA) was increased in the mutant, which had reduced levels of diacylglycerol and triacylglycerol. Using a PA biosensor, we showed that the increased level of PA in the Mopah1 mutant was primarily accumulated in the vacuole. The Mopah1 mutant was blocked in both conidiation and the formation of appressorium‐like structures at hyphal tips. It was nonpathogenic and failed to cause any blast lesions on rice and barley seedlings. RNA sequencing analysis revealed that MoPah1 regulates the expression of transcription factors critical for various developmental and infection‐related processes. The Mopah1 mutant was reduced in the expression and phosphorylation of Pmk1 MAP kinase and delayed in autophagy. Our study demonstrates that MoPah1 is necessary for lipid metabolism, fungal development, and pathogenicity in M. oryzae. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
23. A novel transcription factor UvCGBP1 regulates development and virulence of rice false smut fungus Ustilaginoidea virens.
- Author
-
Chen, Xiaoyang, Li, Pingping, Liu, Hao, Chen, Xiaolin, Huang, Junbin, Luo, Chaoxi, Li, Guotian, Hsiang, Tom, Collinge, David B., and Zheng, Lu
- Subjects
- *
TRANSCRIPTION factors , *CARRIER proteins , *FUNGAL virulence , *RICE , *QUORUM sensing , *MITOGEN-activated protein kinases - Abstract
Ustilaginoidea virens, causing rice false smut (RFS) is an economically important ascomycetous fungal pathogen distributed in rice-growing regions worldwide. Here, we identified a novel transcription factor UvCGBP1 (Cutinase G-box binding protein) from this fungus, which is unique to ascomycetes. Deletion of UvCGBP1 affected development and virulence of U. virens. A total of 865 downstream target genes of UvCGBP1 was identified using ChIP-seq and the most significant KEGG enriched functional pathway was the MAPK signaling pathway. Approximately 36% of target genes contain the AGGGG (G-box) motif in their promoter. Among the targets, deletion of UvCGBP1 affected transcriptional and translational levels of UvPmk1 and UvSlt2, both of which were important in virulence. ChIP-qPCR, yeast one-hybrid and EMSA confirmed that UvCGBP1 can bind the promoter of UvPmk1 or UvSlt2. Overexpression of UvPmk1 in the ∆UvCGBP1-33 mutant restored partially its virulence and hyphae growth, indicating that UvCGBP1 could function via the MAPK pathway to regulate fungal virulence. Taken together, this study uncovered a novel regulatory mechanism of fungal virulence linking the MAPK pathway mediated by a G-box binding transcription factor, UvCGBP1. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
24. Expression of HopAI interferes with MAP kinase signalling in Magnaporthe oryzae.
- Author
-
Zhang, Xue, Liu, Wende, Li, Yang, Li, Guotian, and Xu, Jin ‐ Rong
- Subjects
- *
MITOGEN-activated protein kinases , *PSEUDOMONAS syringae , *PHENOTYPES , *BACTERIAL promoters , *GENE expression in bacteria - Abstract
The Pmk1 and Mps1 MAP kinases are essential for appressorium formation and plant infection in Magnaporthe oryzae. However, their exact roles during invasive growth are not clear because pmk1 and mps1 mutants are defective in penetration. To further characterize their functions after penetration, in this study we expressed the Pseudomonas syringae effector HopAI known to inactivate plant MAP kinases in M. oryzae. Constitutive expression of HopAI with the RP27 or TrpC promoter resulted in defects in hyphal growth, conidiation, appressorium penetration and pathogenicity, which is similar to the phenotype of the mps1 mutant. HopAI interacted strongly with Mps1 in vivo and expression of dominant active MKK2 partially suppressed the defects of PRP27-HopAI transformants, which were significantly reduced in Mps1 phosphorylation. When the infection-specific MIR1 ( Magnaporthe-infection-related gene-1) promoter was used to express HopAI, PMIR1-HopAI transformants were defective in the spreading of invasive hyphae and elicited strong defense responses in penetrated plant cells. Expression of HopAI in Fusarium graminearum also mainly affected the activation of Mgv1, an Mps1 orthologue. Taken together, our results showed that Mps1 is the major intracellular target of HopAI when it is overexpressed, and MAP kinase signalling is important for cell-to-cell movement of invasive hyphae in M. oryzae. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
25. The mechanism of gibberellins treatment suppressing kiwifruit postharvest ripening processes by transcriptome analysis.
- Author
-
Yang, Haiying, Li, Jianzhao, Li, Xiaohe, Wu, Rui, Zhang, Xueli, Fan, Xinguang, Li, Guotian, Gong, Hansheng, Yin, Xueren, and Zhang, Aidi
- Subjects
- *
KIWIFRUIT , *GIBBERELLINS , *FRUIT ripening , *TRANSCRIPTOMES , *PLANT genes , *VITAMIN C - Abstract
Gibberellins (GAs) control numerous processes in plants, including fruit ripening. However, the role of GAs in kiwifruit ripening is not well characterized. Here, we noticed that GA 3 treatment in postharvest kiwifruit delayed the ripening process and many physiological traits were detected such as firmness, starch/total soluble solid content, cell-wall components (pectin, cellulose and hemicellulose), ethylene and ester production, and ascorbic acid (vitamin C) concentration. Transcriptome analysis supplied a molecular basis for investigating the inhibiting mechanism of GA 3 and metabolic variations during kiwifruit ripening. A total of 3116 differently expressed genes (DEGs) were identified, including 51 genes involved in plant hormone signal transduction pathways and 36 structural genes related to these physiological traits. 16 major DEGs were analyzed by real-time PCR during the whole storage period. The expression of most of them was significantly suppressed by GA 3 treatment, such as two ethylene biosynthesis genes (ACOs), two β -amylase (BAMs), five cell-wall modification genes, one GA2ox , and one GA receptor GID1 , whereas the expression of Actinidia29942 (JAZ) was enhanced by GA 3 treatment. Correlation analysis between multiple physiological indicators and candidate genes showed that GA 3 could regulate kiwifruit postharvest ripening effectively and comprehensively. Together, these GA-responsive genes may play important roles in controlling kiwifruit ripening, and GA treatment could be a promising approach for the preservation of postharvest kiwifruit. • GA 3 treatment delayed postharvest kiwifruit ripening and softening. • GA 3 inhibited starch/cell wall degradation, and ethylene/ester production. • 3116 DEGs responded to GA 3 treatment were identified from RNA-seq. • 16 major DEGs might be involved in controlling kiwifruit ripening. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
26. Plant Fungal Pathogenesis.
- Author
-
Yang, Jun, Hsiang, Tom, Bhadauria, Vijai, Chen, Xiao-Lin, and Li, Guotian
- Subjects
- *
FUNGI , *MYCOSES , *PLANT diseases - Published
- 2017
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.