15 results on '"Kyungho Lee"'
Search Results
2. Cytoplasmic IRE1α-mediated XBP1 mRNA Splicing in the Absence of Nuclear Processing and Endoplasmic Reticulum Stress.
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Sung Hoon Back, Kyungho Lee, Vink, Elizabeth, and Kaufman, Randal J.
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MESSENGER RNA , *RNA splicing , *CYTOPLASM , *ENDOPLASMIC reticulum , *ORGANELLES , *PROTEIN kinases - Abstract
Accumulation of unfolded proteins in the endoplasmic reticulum (ER) activates an intracellular signal transduction program termed the unfolded protein response (UPR). In mammalian cells, the UPR is signaled in part through dimerization of ER membrane-localized IRE1α to activate its protein kinase and endoribonuclease activities. Activated IRE1α cleaves XBP1 mRNA at two sites to initiate an unconventional splicing reaction. The 5′ and 3′ fragments are subsequently joined by an RNA ligase activity, thereby removing a 26-base intron. This splicing reaction creates a translational frameshift to produce a functional XBP1 transcription factor. However, the cellular location and physiological processes required for splicing of XBP1 mRNA are not well characterized. To study these processes, XBP1 mRNAs were engineered in which translation of enhanced green fluorescence protein or luciferase required splicing of the XBP1 intron. Using cell lines that continuously or transiently express these reporter constructs, we show that cytoplasmic unspliced XBP1 mRNA is efficiently spliced by activated IRE1α and requires ongoing cellular transcription but not active translation. The XBP1 intron was effectively removed from RNA substrates transcribed from T7 RNA polymerase or delivered directly to the cytoplasm by RNA transfection, thus indicating that the splicing reaction does not require nuclear processing of the RNA substrate. Analysis of nuclear and cytoplasmic RNA fractions demonstrated that XBP1 mRNA splicing occurs in the cytoplasm. Moreover, an artificial Fv-IRE1αΔN was engineered that was able to splice XBP1 mRNA upon chemical-induced dimerization. These findings demonstrate that IRE1α dimerization is sufficient to activate XBP1 mRNA splicing in the absence of the UPR. We propose that XBP1 mRNA cytoplasmic splicing provides a novel mechanism to rapidly induce translation of a transcription factor in response to a specific stimulus. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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3. Improved VBIC Model for SiGe HBTs With an Unified Model of Heterojunction Barrier Effects.
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Kyungho Lee, Dae-Hyung Cho, Kang-Wook Park, and Bumman Kim
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SEMICONDUCTOR junctions , *BIPOLAR transistors , *INTEGRATED circuits , *DIRECT current circuits , *SEMICONDUCTOR diodes , *SILICON compounds - Abstract
An improved bipolar transistor model considering heterojunction barrier effect (HBE) in SiGe double heterojunction bipolar transistors is developed. The effect of barrier formation due to high level injection, which is related to the rapid degradations of the dc current gain (β) and cutoff frequency (ƒT), is carefully investigated and analyzed. As the collector current becomes high, the conduction band barrier is induced and increased. It causes the saturation of collector current (JC) due to the blocking of carrier transport, the sharp increase of base transit time (τB) due to the additional charge storage, the increase of base current (JB) due to the increased recombination, and the decrease of intrinsic base resistance (Rbi) due to the increased charge and base pushout. Those phenomena are included into a vertical bipolar intercompany model (VBIC) compact model by employing a unified model of the HBE on JC, JB, τB, and Rbi. Furthermore, portions of τB and Rbi from the Kirk effect itself are modeled according to the high current model description and the new formulation of widened base, respectively. A full extraction of parameters has been performed and the modified VBIC model is applied. The modeling accuracy is significantly improved at the high current region for the dc and RF characteristics. [ABSTRACT FROM AUTHOR]
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- 2006
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4. Direct Parameter Extraction of SiGe HBTs for the VBIC Bipolar Compact Model.
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Kyungho Lee, Kwangsik Choi, Sang-Ho Kook, Dae-Hyung Cho, Kang-Wook Park, and Kim, Bumman
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BIPOLAR transistors , *SEMICONDUCTORS , *COMPUTER integrated manufacturing systems , *COMPUTER-aided engineering , *CAD/CAM systems , *MOTION control devices - Abstract
An improved direct parameter extraction method of SiGe heteroj unction bipolar transistors (HBTs) for the vertical bipolar intercompany (VBIC)-type hybrid-π model is developed. All the equivalent circuit elements are extracted analytically from S-parameter data only and without any numerical optismization. The proposed technique of the parameter extraction, differing from the previous ones, focuses on correcting the pad de-embedding error for an accurate and invariant extraction of intrinsic base resistance (Rbi), formulating a new parasitic substrate network, and improving the extraction procedure of transconductance (gm), dynamic base-emitter resistance (rπ), and basc-emitter capacitance (Cπ) using the accurately extracted Rbbi. The extracted parameters are frequency-independent and reliable due to elimination of any de-embedding errors. The agreements between the measured and model-calculated data are excellent in the frequency range of 0.2-10.2 GHz over a wide range of bias points. Therefore, we believe that the proposed extraction method is a simple and reliable routine applicable to the optimization of transistor design, process control, and the improvement of VBIC compact model, especially for SiGe HBTs. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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5. An Optimized Design of Distributed Active Transformer.
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Seungwoo Kim, Kyungho Lee, Jongwoo Lee, Bumman Kim, Kee, Scott D., Aoki, Ichiro, and Rutledge, David B.
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MAGNETIC fields , *FIELD theory (Physics) , *GEOMAGNETISM , *MAGNETICS , *ELECTROMAGNETIC induction - Abstract
A novel structure distributed active transformer (DAT), which significantly reduces the coupling from the DAT to the feed line is demonstrated. A grounded, guard line is implemented to isolate the feed line from the magnetic field of the DAT. The measured result of the DAT on a GaAs substrate shows a 10.5-dB reduction in the coupling. To reduce DAT loss, an air-bridge connected double primary DAT structure is implemented. The DAT at 2 GHz shows a 0.7-dB loss reduction in comparison to the conventional DAT. The improved DAT performance is related to the reduced metal resistance and closer coupling between the primary and secondary loops without any increase in the DAT area. [ABSTRACT FROM AUTHOR]
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- 2005
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6. The Unfolded Protein Response Is Required for Haploid Tolerance in Yeast.
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Kyungho Lee, Neigeborn, Lenore, and Kaufman, Randal J.
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HAPLOIDY , *YEAST , *GENETIC transcription - Abstract
Reports that the unfolded protein response (UPR) is required for haploid tolerance in yeast. Transcription factor that mediates the UPR in Saccharomyces cerevisiae; Novel function for HAC1 in haploid tolerance; Autodiploidization of hac1 spore clones occurring after germinations.
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- 2003
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7. New Collector Undercut Technique Using a SiN Sidewall for Low Base Contact Resistance in InP/InGaAs SHBTs.
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Kyungho Lee, Daekyu Yu, Minchul Chung, Jongchan Kang, and Bumman Kim
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BIPOLAR transistors , *SILICON nitride - Abstract
Focuses on a study which proposed a collector undercut process using silicon nitride protection sidewall for high speed single heterojunction bipolar transistors (HBT). Discussion on research focus in HBT; Device structure and fabrication; Results and discussion.
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- 2002
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8. Unexpected angular or rotational deformity after corrective osteotomy.
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Seung Yeol Lee, Jiwon Jeong, Kyungho Lee, Chin Youb Chung, Kyoung Min Lee, Soon-Sun Kwon, Young Choi, Tae Gyun Kim, Jeong Ik Lee, Jehee Lee, and Moon Seok Park
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ORTHOPEDIC surgery complications , *BONE abnormalities , *OSTEOTOMY , *ORTHOPEDICS , *ORTHOPEDISTS , *BONE surgery - Abstract
Background Codman's paradox reveals a misunderstanding of geometry in orthopedic practice. Physicians often encounter situations that cannot be understood intuitively during orthopedic interventions such as corrective osteotomy. Occasionally, unexpected angular or rotational deformity occurs during surgery. This study aimed to draw the attention of orthopedic surgeons toward the concepts of orientation and rotation and demonstrate the potential for unexpected deformity after orthopedic interventions. This study focused on three situations: shoulder arthrodesis, femoral varization derotational osteotomy, and femoral derotation osteotomy. Methods First, a shoulder model was generated to calculate unexpected rotational deformity to demonstrate Codman's paradox. Second, femoral varization derotational osteotomy was simulated using a cylinder model. Third, a reconstructed femoral model was used to calculate unexpected angular or rotational deformity during femoral derotation osteotomy. Results Unexpected external rotation was found after forward elevation and abduction of the shoulder joint. In the varization and derotation model, closed-wedge osteotomy and additional derotation resulted in an unexpected extension and valgus deformity, namely, undercorrection of coxa valga. After femoral derotational osteotomy, varization and extension of the distal fragment occurred, although the extension was negligible. Conclusions Surgeons should be aware of unexpected angular deformity after surgical procedure involving bony areas. The degree of deformity differs depending on the context of the surgical procedure. However, this study reveals that notable deformities can be expected during orthopedic procedures such as femoral varization derotational osteotomy. [ABSTRACT FROM AUTHOR]
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- 2014
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9. Analysis of Nonlinear Behavior of Power HBTs.
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Woonyun Kim, Sanghoon Kang, Kyungho Lee, Minchul Chung, Jongchan Kang, and Bumman Kim
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BIPOLAR transistors , *NONLINEAR electric circuits - Abstract
Analyzes the nonlinear behavior of power heterojunction bipolar transistors (HBT). Development of an analytical nonlinear HBT model; Use of the Volterra-series analysis; Consideration of several nonlinear components; Dependence of the third-order intermodulation on the terminations of the source second harmonic impedances.
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- 2002
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10. Complementary Signaling Pathways Regulate the Unfolded Protein Response and Are Required for....
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Xiaohua Shen, Ellis, Ronald E., Kyungho Lee, Chuan-Yin Liu, Kun Yang, Solomon, Aaron, Yoshida, Hiderou, Morimoto, Rick, Kurnit, David M., Mori, Kazitoshi, and Kaufman, Randal J.
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PROTEIN analysis , *CAENORHABDITIS elegans - Abstract
Examines the regulation of the unfolded protein response by the complementary signaling pathway. Requirement of the complementary signaling pathways for Caenorhabditis elegans; Presence of the unfolded protein within the endoplasmic reticulum; Use of protein kinase for the mediation of translation attenuation.
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- 2001
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11. Detection of 8-oxoguanine and apurinic/apyrimidinic sites using a fluorophore-labeled probe with cell-penetrating ability.
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Dong Min Kang, Jong-Il Shin, Ji Beom Kim, Kyungho Lee, Ji Hyung Chung, Hye-Won Yang, Kil-Nam Kim, and Ye Sun Han
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RIBOSOMAL proteins , *BINDING site assay , *DNA damage , *BINDING sites , *REACTIVE oxygen species - Abstract
Background: Reactive oxygen species (ROS) produce different lesions in DNA by ROS-induced DNA damage. Detection and quantification of 8-oxo-7,8-dihydroguanine (8-oxoG) within cells are important for study. Human ribosomal protein S3 (hRpS3) has a high binding affinity to 8-oxoG. In this study, we developed an imaging probe to detect 8-oxoG using a specific peptide from hRpS3. Transactivator (TAT) proteins are known to have cellpenetrating properties. Therefore, we developed a TAT-S3 probe by attaching a TAT peptide to our imaging probe. Results: A DNA binding assay was conducted to confirm that our probe bound to 8-oxoG and apurinic/apyrimidinic (AP) sites. We confirmed that the TAT-S3 probe localized in the mitochondria, without permeabilization, and fluoresced in H2O2-treated HeLa cells and zebrafish embryos. Treatment with Mitoquinone (MitoQ), a mitochondria-targeted antioxidant, reduced TAT-S3 probe fluorescence. Additionally, treatment with O8, an inhibitor of OGG1, increased probe fluorescence. A competition assay was conducted with an aldehyde reaction probe (ARP) and methoxyamine (MX) to confirm binding of TAT-S3 to the AP sites. The TAT-S3 probe showed competitive binding to AP sites with ARP and MX. Conclusions: These results revealed that the TAT-S3 probe successfully detected the presence of 8-oxoG and AP sites in damaged cells. The TAT-S3 probe may have applications for the detection of diseases caused by reactive oxygen species. [ABSTRACT FROM AUTHOR]
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- 2019
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12. Characteristics and distribution of terpenes in South Korean forests.
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Jaeseok Lee, Kyoung Sang Cho, Youngjae Jeon, Ji Beom Kim, Young-ran Lim, Kyungho Lee, and Im-Soon Lee
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TERPENES , *PINE , *NATURAL resources , *CONIFEROUS forests , *CONIFERS , *FORESTS & forestry - Abstract
The importance of forests continues to increase throughout the world, and one of the reasons is that a forest is a major place to emit terpenes, which have been reported to be beneficial to human health. In South Korea, forests occupy about 64% of the total land area and consist mainly of pine and oak trees. Since only a limited number of forests have been analyzed to date, a comprehensive understanding of terpenes emitted from regional forests remains in its infancy in Korea. Here, to gain insights into terpenes from regional forests located in South Korea, we review the characteristics of Korean forests and recent studies on major terpenes emitted from regional forests as well as from native trees dominant in South Korea. We also discuss meteorological factors that affect the terpene emissions in Korean forests. In conclusion, 18 types of terpenes were detected in Korean forests and their compositions in different forests are largely dependent on the dominant plant species in the forest. Moreover, terpene emissions in Korean forests are affected by various environmental factors, including temperature, amount and duration of daylight, season, and age of trees. To improve the understanding of the characteristics of terpene distribution, more studies are required on the terpene production of Korean forests in various regions. [ABSTRACT FROM AUTHOR]
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- 2017
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13. Endoscopic Findings of Enteropathy-Associated T-Cell Lymphoma Type II: A Case Series.
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Yun Soo Hong, Young Sik Woo, Gaeun Park, Kyungho Lee, Soo Hoon Kang, Hyun Woo Lee, Eun Ran Kim, Sung Noh Hong, Dong Kyung Chang, Young Ho Kim, Poong-Lyul Rhee, and Kim, Jae J.
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T-cell lymphoma , *GASTROINTESTINAL cancer , *ENDOSCOPY , *ENTEROSCOPY , *CELIAC disease - Abstract
Enteropathy-associated T-cell lymphoma (EATL) is a rare extranodal T-cell lymphoma arising from the intestine. Two types of EATL have been reported. In contrast to the classic EATL type I, EATL type II occurs sporadically, is unrelated to celiac disease, and comprises 10% to 20 % of all EATL cases. A total of five cases of EATL type II were diagnosed at our clinic from January 2009 to September 2012. Four of the five patients were diagnosed with the help of endoscopy. Among the four patients, two of the cases involved both the small and large intestines, whereas in the other two patients, EATL was limited to the small intestine. Common endoscopic findings included innumerable fine granularities (also called mosaic mucosal patterns) and diffuse thickening of the mucosa with a semicircular shallow ulceration in the lesions of the small bowel. In contrast, the endoscopic findings of the colon were nonspecific and could not distinguish EATL type II from other diseases. There are only few published reports regarding the representative endoscopic findings of EATL. Here, we present the clinical and endoscopic findings of four cases of EATL type II diagnosed by endoscopy. [ABSTRACT FROM AUTHOR]
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- 2016
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14. Collision Attacks on AES-192/256, Crypton-192/256, mCrypton-96/128, and Anubis.
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Jinkeon Kang, Kitae Jeong, Jaechul Sung, Seokhie Hong, and Kyungho Lee
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STOCHASTIC Petri nets , *BLOCK ciphers , *CYBERTERRORISM , *CRYPTOGRAPHY , *APPLICATION software - Abstract
At AES'00, a collision attack on 7-round reduced AES was proposed. In this paper, we apply this idea to seven SPN block ciphers, AES-192/256, Crypton-192/256, mCrypton-96/128, and Anubis. Applying our attacks on AES-192/256, we improve the attack result based on meet-in-the-middle attack (AES-192) and the attack result proposed in AES'00 (AES-256), respectively. Our attack result on Anubis is superior to known cryptanalytic result on it. In the cases of Crypton-192/256 and mCrypton-96/128, our attacks are applicable to 8-round reduced versions. The attack results on mCrypton-96/128 are more practical than known cryptanalytic results on them. [ABSTRACT FROM AUTHOR]
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- 2013
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15. ATF6α induces XBP1-independent expansion of the endoplasmic reticulum.
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Bommiasamy, Hemamalini, Sung Hoon Back, Fagone, Paolo, Kyungho Lee, Meshinchi, Sasha, Vink, Elizabeth, Sriburi, Rungtawan, Frank, Matthew, Jackowski, Suzanne, Kaufman, Randal J., and Brewer, Joseph W.
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ENDOPLASMIC reticulum , *ORGANELLE formation , *CARRIER proteins , *PROTEIN folding , *MESSENGER RNA , *LECITHIN , *MOLECULAR biology - Abstract
A link exists between endoplasmic reticulum (ER) biogenesis and the unfolded protein response (UPR), a complex set of signaling mechanisms triggered by increased demands on the protein folding capacity of the ER. The UPR transcriptional activator X-box binding protein 1 (XBP1) regulates the expression of proteins that function throughout the secretory pathway and is necessary for development of an expansive ER network. We previously demonstrated that overexpression of XBP1(S), the active form of XBP1 generated by UPR-mediated splicing of Xbp1 mRNA, augments the activity of the cytidine diphosphocholine (CDP-choline) pathway for biosynthesis of phosphatidylcholine (PtdCho) and induces ER biogenesis. Another UPR transcriptional activator, activating transcription factor 6α (ATF6α), primarily regulates expression of ER resident proteins involved in the maturation and degradation of ER client proteins. Here, we demonstrate that enforced expression of a constitutively active form of ATF6α drives ER expansion and can do so in the absence of XBP1(S). Overexpression of active ATF6α induces PtdCho biosynthesis and modulates the CDP-choline pathway differently than does enforced expression of XBP1(S). These data indicate that ATF6α and XBP1(S) have the ability to regulate lipid biosynthesis and ER expansion by mechanisms that are at least partially distinct. These studies reveal further complexity in the potential relationships between UPR pathways, lipid production and ER biogenesis. [ABSTRACT FROM AUTHOR]
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- 2009
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