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We present ROBOSPECT, a new code to automatically measure and deblend line equivalent widths for both absorption and emission spectra. We test the accuracy of these measurements against simulated spectra as well as manual equivalent width measurements of five stellar spectra over a range of signal-to-noise values and a set of long slit emission spectra. We find that ROBOSPECT accurately matches both the synthetic and manual measurements, with scatter consistent with the expectations based on the data quality and the results of Cayrel. [ABSTRACT FROM AUTHOR]

We present a comprehensive abundance analysis of 20 elements for 16 new low-metallicity stars from the Chemical Abundances of Stars in the Halo (CASH) project. The abundances have been derived from both Hobby-Eberly Telescope High Resolution Spectrograph snapshot spectra (R ~ 15,000) and corresponding high-resolution (R ~ 35,000) Magellan Inamori Kyocera Echelle spectra. The stars span a metallicity range from [Fe/H] from -2.9 to -3.9, including four new stars with [Fe/H] < -3.7. We find four stars to be carbon-enhanced metal-poor (CEMP) stars, confirming the trend of increasing [C/Fe] abundance ratios with decreasing metallicity. Two of these objects can be classified as CEMP-no stars, adding to the growing number of these objects at [Fe/H] < -3. We also find four neutron-capture-enhanced stars in the sample, one of which has [Eu/Fe] of 0.8 with clear r-process signatures. These pilot sample stars are the most metal-poor ([Fe/H] ≾ -3.0) of the brightest stars included in CASH and are used to calibrate a newly developed, automated stellar parameter and abundance determination pipeline. This code will be used for the entire ~500 star CASH snapshot sample. We find that the pipeline results are statistically identical for snapshot spectra when compared to a traditional, manual analysis from a high-resolution spectrum. [ABSTRACT FROM AUTHOR]

We present a detailed abundance analysis of 23 elements for a newly discovered carbon-enhanced metal-poor (CEMP) star, HE 0414−0343, from the Chemical Abundances of Stars in the Halo Project. Its spectroscopic stellar parameters are Teff = 4863 K, ξ = 2.20 km s−1, and [Fe/H] = −2.24. Radial velocity measurements covering seven years indicate HE 0414−0343 to be a binary. HE 0414−0343 has and is strongly enhanced in neutron-capture elements but its abundances cannot be reproduced by a solar-type s-process pattern alone. Traditionally, it could be classified as a “CEMP-r/s” star. Based on abundance comparisons with asymptotic giant branch (AGB) star nucleosynthesis models, we suggest a new physically motivated origin and classification scheme for CEMP-s stars and the still poorly understood CEMP-r/s. The new scheme describes a continuous transition between these two so-far distinctly treated subgroups: CEMP-sA, CEMP-sB, and CEMP-sC. Possible causes for a continuous transition include the number of thermal pulses the AGB companion underwent, the effect of different AGB star masses on their nucleosynthetic yields, and physics that is not well approximated in 1D stellar models such as proton ingestion episodes and rotation. Based on a set of detailed AGB models, we suggest the abundance signature of HE 0414−0343 to have arisen from a >1.3 M⊙ mass AGB star and a late-time mass transfer that transformed HE 0414−0343 into a CEMP-sC star. We also find that the [Y/Ba] ratio well parametrizes the classification and can thus be used to easily classify any future such stars. [ABSTRACT FROM AUTHOR]

Introduction: Matrix metalloproteinases (MMPs) have repeatedly been shown to play a very active role in extracellular matrix degradation associated with tumor invasion and metastasis. Tissue inhibitors of MMPs (TIMPs) are well-known for their ability to inhibit MMP activity thereby inhibiting malignant progression. Inositol hexaphosphate (IP6 phytic acid) has been recognized to have both preventive and therapeutic effects against various cancers including that of colon. In in vitro studies, IP6 has been demonstrated to inhibit cancer cell adhesion and migration. In the present study, the effect of IP6 on the expression of MMP and TIMP genes was evaluated in unstimulated and IL-1β-stimulated colon cancer cell line Caco-2. Materials and methods: Real-time QRT-PCR was used to validate the transcription level of selected MMP and TIMP genes in Caco-2 cells after treatment with 1 ng/ml of IL-1β, 2.5 mM of IP6, and both for 6, 12, and 24 h. Results: Stimulation of cells with IL-1β only resulted in an overexpression of MMP and their TIMP mRNAs. A significant decrease in MMP-13, MMP-3, MMP-2, and TIMP-1 basal expression was achieved by IP6. IP6 was also an efficient downregulator of MMP-1, MMP-9, and TIMP-2 genes transcription stimulated by IL-1β in 6 h lasting culture. After 12 h, IL-1β-induced MMP-2 mRNA expression was significantly reduced by IP6. Conclusion: Proinflammatory cytokine IL-1β upregulates MMP and TIMP mRNAs expression in colon cancer epithelial cells Caco-2. IP6 (2.5 mM) influences constitutive expression of both MMP and TIMP genes and downregulates IL-1β stimulated transcription of some of these genes. IP6 exerts its anti-metastatic activity through modulation of MMP and TIMP genes expression to prevent cancer cell migration and invasion. [ABSTRACT FROM AUTHOR]

In the faint star KIC 9700322 observed by the Kepler satellite, 76 frequencies with amplitudes from 14 to 29 000 ppm were detected. The two dominant frequencies at 9.79 and 12.57 d (113.3 and 145.5 μHz), interpreted to be radial modes, are accompanied by a large number of combination frequencies. A small additional modulation with a 0.16 d frequency is also seen; this is interpreted to be the rotation frequency of the star. The corresponding prediction of slow rotation is confirmed by a spectrum from which km s is obtained. The analysis of the spectrum shows that the star is one of the coolest δ Sct variables. We also determine T = 6700 ± 100 K and = 3.7 ± 0.1, compatible with the observed frequencies of the radial modes. Normal solar abundances are found. An frequency quintuplet is also detected with a frequency separation consistent with predictions from the measured rotation rate. A remarkable result is the absence of additional independent frequencies down to an amplitude limit near 14 ppm, suggesting that the star is stable against most forms of non-radial pulsation. A low-frequency peak at 2.7763 d in KIC 9700322 is the frequency difference between the two dominant modes and is repeated over and over in various frequency combinations involving the two dominant modes. The relative phases of the combination frequencies show a strong correlation with frequency, but the physical significance of this result is not clear. [ABSTRACT FROM AUTHOR]

Interspecies hybrids between distinct species of the genus Xiphophorus are often used in varied research investigations to identify genomic regions associated with the inheritance of complex traits. There are 24 described Xiphophorus species and a greater number of pedigreed strains; thus, the number of potential interspecies hybrid cross combinations is quite large. Previously, select Xiphophorus experimental crosses have been shown to exhibit differing characteristics between parental species and among the hybrid fishes derived from crossing them, such as widely differing susceptibilities to chemical or physical agents. For instance, genomic regions harboring tumor suppressor and oncogenes have been identified via linkage association of these loci with a small set of established genetic markers. The power of this experimental strategy is related to the number of genetic markers available in the Xiphophorus interspecies cross of interest. Thus, we have undertaken the task of expanding the suite of easily scored markers by characterization of Xiphophorus microsatellite sequences. Using a cross between Xiphophorus maculatus and X. andersi, we report a linkage map predominantly composed of microsatellite markers. All 24 acrocentric chromosome sets of Xiphophorus are represented in the assembled linkage map with an average intergenomic distance of 7.5 cM. Since both male and female F1 hybrids were used to produce backcross progeny, these recombination rates were compared between “male” and “female” maps. Although several genomic regions exhibit differences in map length, male- and female-derived maps are similar. Thus Xiphophorus, in contrast to zebrafish, Danio rerio, and several other vertebrate species, does not show sex-specific differences in recombination. The microsatellite markers we report can be easily adapted to any Xiphophorus interspecies and some intraspecies crosses, and thus provide a means to directly compare results derived from independent experiments. [ABSTRACT FROM AUTHOR]

We describe the clinical and genetic characteristics of the family, in which the diagnosis of LQT1 had been made. The electrocardiogram (ECG) characteristics of this patient indicated the likelihood of LQTS1. Polymorphic ventricular extrasystolies and episodes of polymorphic non-sustained ventricular tachycardia were confirmed by Holter ECG monitoring. On the exertional electrocardiogram polymorphic ventricular tachycardia (torsade de pointes) was recorded. Direct sequencing of both DNA strands revealed the absence of mutations or polymorphisms in the KCNQ1, HERG, and SCN5A genes. [ABSTRACT FROM AUTHOR]