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Background: Cabbage (Brassica oleracea L. var. capitata) is an important crop within the Brassica oleracea species and is extensively cultivated worldwide. In recent years, outbreaks of downy mildew caused by Hyaloperonospora parasitica have resulted in substantial losses in cabbage production. Despite this, there have been limited studies on genes associated with resistance to downy mildew in cabbage. Results: This study identified sister lines exhibiting significant differences in disease resistance and susceptibility. Using bulked segregant analysis followed by sequencing (BSA-seq) and linkage analysis, the cabbage resistance locus BoDMR2 was accurately mapped to an approximately 300 kb interval on chromosome 7. Among the candidate genes identified, several single nucleotide polymorphisms (SNPs) and a 3-bp insertion were found within the conserved domain of the Bo7g117810 gene, encoding a leucine-rich repeat domain protein, in susceptible genotypes. Additionally, real-time quantitative polymerase chain reaction (RT‒qPCR) analysis revealed that the expression level of Bo7g117810 in resistant specimens was 2.5-fold higher than that in susceptible specimens. An insertion‒deletion (InDel) marker was designed based on the identified insertion in susceptible materials, facilitating the identification and selection of downy mildew-resistant cabbage cultivars. Conclusions: This study identifies Bo7g117810 as a potential candidate gene associated with adult-stage resistance to downy mildew in cabbage, supported by observed differences in gene sequence and expression levels. Furthermore, the development of an InDel marker I1-3, based on its mutation, provides valuable resources for breeding resistant cabbage cultivars. [ABSTRACT FROM AUTHOR]

The pathogen Plasmopara halstedii, causing downy mildew (DM), is a widespread sunflower disease which can be controlled by single dominant genes. Wild Helianthus annuus have been a valuable source of vertical resistance to control P. halstedii, but such resistance may eventually be overcome by new races of the pathogen. Alternatively, quantitative, or partial resistance, is more stable and may be combined with vertical resistance to prevent DM outbreaks. We assessed the responses of six populations of wild H. annuus naturalized in Argentina to race 710 of P. halstedii. We examined: 1) the aerial phenotype (including seedling death) using two damage scales and three disease indices, 2) the growth of the pathogen along the hypocotyls, and 3) the presence of the pathogen in the root system. We found that the evaluated sunflower wild populations had lower disease levels than the susceptible cultivated controls. A histologic analysis showed that the wild H. annuus seedlings showed cellular reactions (e.g. necrosis and the deposit of materials on the walls of invaded cells) to restrict the pathogen's growth, allowing the identification of two possible types of resistance: type I, when the growth of the pathogen was limited to the base of the hypocotyls, and type II, when the pathogen managed to invade the entire length of the hypocotyls. The wild sunflower populations also showed differential responses to root infections. A quantitative or partial genetic resistance, rather than resistance based on major genes, seems to be operating in the sampled populations. The individuals found to be resistant in each population represent promising germplasm for sunflower breeding. [ABSTRACT FROM AUTHOR]

Maize production and quality are affected by infection with plant pathogens. One of the maize's essential and main diseases is downy mildew caused by Peronosclerospora spp. Downy mildew is a limiting factor in increasing production and can reduce production by 80-100%. It is because the affected plant cannot produce cobs. Pathogens obtain nutrients from the host cell, which can kill the cell and damage the surrounding tissues, resulting in visible downy mildew symptoms. Boron (B) plays a role in forming phloem, increasing the fruit's number, weight, bunch weight, and diameter. The primary function of B at the molecular level is the cross-linking of pectin in the plant cell wall. Ramnogalacturonan II (RG II) is a pectic polysaccharide that contributes to the mechanical strength and properties of the primary wall cross-linked by borate diesters. Phosphorus (P) controls the downsides in the greenhouse and field conditions. This study aims to measure changes in chlorophyll index, P and B uptakes in downy mildew affected plants. The field experiment used a group randomized design with six natural phosphate (FA) application treatments and four groups of borax doses as replicates. The results showed that the downy mildew decreased the chlorophyll index of the leaves at different levels of attack. The results of P concentration according to the position of healthy plant leaves were significantly different due to P treatment. In contrast to concentration B, there is no real difference. P and B uptake results in downy mildew-infested plants showed a significant difference only in P uptake in leaves with 1 FA treatment. [ABSTRACT FROM AUTHOR]

Background: The purpose of applying bacterial consortium and rice husk charcoal to corn plants is to determine the effect of the combination and whether it can control the intensity of downy mildew attacks and increase corn plant growth. Methods: This research was conducted at the experimental farm of the University of Muhammadiyah Malang. This research was conducted using two factors: the dose of rice husk charcoal application and the application of bacterial consortium with three replications using a randomized block design. The treatments were Charcoal husk (H): H5 = Charcoal husk @5 tons/ha, H10= Charcoal husk @10 tons, H15 Charcoal husk @15 tons/ha, Bacterial consortium (W): W0= without bacteria, WL = bacterial consortium 10 cc/l via foliar spraying, WS = bacterial consortium 10 cc/l through soil, WLS = bacterial consortium 10cc/l through soil and foliar spraying Result: The results showed that the intensity of downy mildew attack on the combined application of the bacterial consortium and rice husk charcoal was lower than that of the no-combination treatment. The length and diameter of the plants that were treated with rice husk charcoal had a significant effect. Still, the application of the bacterial consortium had no effectand the number of leaves was not affected by the treatment. [ABSTRACT FROM AUTHOR]

Fungi infection, especially derived from Plasmopara viticola, causes severe grapevine economic losses worldwide. Despite the availability of chemical treatments, looking for eco-friendly ways to control Vitis vinifera infection is gaining much more attention. When a plant is infected, multiple disease-control molecular mechanisms are activated. PRRs (Pattern Recognition Receptors) and particularly RLKs (receptor-like kinases) take part in the first barrier of the immune system, and, as a consequence, the kinase signaling cascade is activated, resulting in an immune response. In this context, discovering new lectin-RLK (LecRLK) membrane-bounded proteins has emerged as a promising strategy. The genome-wide localization of potential LecRLKs involved in disease defense was reported in two grapevine varieties of great economic impact: Chardonnay and Pinot Noir. A total of 23 potential amino acid sequences were identified, exhibiting high-sequence homology and evolution related to tandem events. Based on the domain architecture, a carbohydrate specificity ligand assay was conducted with docking, revealing two sequences as candidates for specific Vitis vinifera–Plasmopara viticola host–pathogen interaction. This study confers a starting point for designing new effective antifungal treatments directed at LecRLK targets in Vitis vinifera. [ABSTRACT FROM AUTHOR]

Harpins play a key role in inducing disease resistance in crops, and identifying their core functional regions and establishing a system for their efficient expression would be very valuable. In this study, large amounts of soluble fusion proteins of harpin HrpZ and its subpeptides were obtained via the optimized induction conditions (28 ℃C with 0.5 mmol.L-1 IPTG for 6 h) in Escherichia coli BL21 (DE3). Hypersensitive response (HR) assays demonstrated that the C-terminal 66 aa of HrpZ (HrpZ_C_2_2) elicited a strong HR in tobacco (Nicotiana benthamiana) and grape (Flame Seedless) leaves. Additionally, treatment with HrpZ, and particularly HrpZ_C_2_2, significantly reduced the disease incidence and severity index of field vine leaves and those inoculated with downy mildew. The determination of the physiological parameters indicated that HrpZ, and especially HrpZ_C_2_2, improved the photosynthesis- and chlorophyll fluorescence-related parameters, enhanced the activity of defense-related enzymes, including SOD, POD, CAT and PAL, and increased the H2O2 level. Collectively, we efficiently expressed a core peptide of HrpZ and elucidated its strong ability to elicit a HR and resistance to downy mildew. This research provides insight into understanding the structure and function of HrpZ and will advance the application of HrpZ_C_2_2 to increase the resistance of grapevine to downy mildew. [ABSTRACT FROM AUTHOR]

Downy mildew caused by Sclerospora graminicola is a systemic disease that affects the yield and quality of foxtail millet. This obligate biotrophic oomycete manipulates host physiology and immune processes through numerous effectors. A thorough comprehension of effector biology is crucial to unravel disease mechanisms and understand host plant resistance. In this study, bioinformatic analyses revealed 498 potentially secreted proteins in S. graminicola, of which 62 were identified as RXLR effectors; 46 RXLR‐encoding genes exhibited upregulated expression during the early stages of infection. To elucidate the functions of these secreted proteins, a heterogeneous expression system was developed using Nicotiana benthamiana. Twenty‐one RXLR effectors secreted by S. graminicola were transiently expressed in N. benthamiana, of which four could suppress INF1‐triggered cell death. Various defence responses in N. benthamiana were attenuated, including inhibition of defence gene expression, reduction of reactive oxygen species (ROS) accumulation and diminished callose deposition. The expression of SG_RXLR41 also enhanced the growth of Phytophthora capsici on N. benthamiana leaves. These findings indicate that S. graminicola facilitates infection and expansion through the secretion of multiple RXLR effectors, and SG_RXLR41 is an important virulence‐related effector that is involved in manipulating plant immunity by suppressing cell death. [ABSTRACT FROM AUTHOR]

Field studies were carried out to evaluate valifenalate 6 % + mancozeb 60 % WG against downy mildew of cucumber incited by Pseudoperonospora cubensis. The results revealed that, application of valifenalate 6 % + mancozeb 60 % WG at 3000 g/ha had recorded lowest downy mildew severity (7.99%) with maximum yield of 12.23 t/ha which was significantly superior over standard check and untreated control. Therefore valifenalate 6 % + mancozeb 60 % WG can be an additional option for effective management of downy mildew of cucumber in order to break the fungicide resistance development by the pathogen against mancozeb. Subsequent testing on phytotoxicity revealed that there were no visual phytotoxic symptoms observed during the experimentation. [ABSTRACT FROM AUTHOR]

The genus Peronospora is the largest genus of the oomycetes, fungus-like members of the kingdom Straminipila that also contains amoeboid (e.g., Leukarachnion) and plant-like (e.g., Laminaria) lifeforms. Peronospora species are obligate biotrophic plant pathogens, causing high economic losses in various crops and ornamentals, including Plantago species. Several species of Plantago are used as speciality crops and medicinal plants. In this study, Peronospora species parasitic on Plantago were investigated based on morphology and phylogenetic analyses using two nuclear (ITS, nrLSU) loci and one mitochondrial (cox2) locus. As a result of these investigations, 10 new species are added to the already known Peronospora species on Plantago. Interestingly, it was found that four independent species are parasitic to Plantago major, highlighting that the reliance on the host plant for pathogen determination can be misleading in Peronospora. Taking this into account, morphological and phylogenetic analyses should be conducted as a prerequisite for effective quarantine regulations and phytosanitary measures. [ABSTRACT FROM AUTHOR]

Although irrigation scheduling has been studied for diverse vegetable crops, much less attention has been given to irrigation scheduling for the seed crops on which these production systems rely. In spinach, for which irrigation scheduling needs are likely to vary greatly between seed and leaf production, this leaves seed producers without adequate resources to make irrigation scheduling decisions. Our research sought to fill this gap by evaluating two alternative irrigation scheduling strategies (a publicly available decision-support tool and soil moisture sensors) and four soil moisture thresholds for irrigation for their impacts on vegetative growth, marketable seed yield, seed quality, and the severity of Stemphylium leaf spot (caused by Stemphylium vesicarium and Stemphylium beticola), a common foliar disease of spinach, under sprinkler irrigation. We found that in all 3 years of the study, earlier and more frequent irrigation increased vegetative growth. However, marketable seed yield only increased relative to the control treatment based on farmers' standard irrigation practices in 1 of the 3 years--a year with an abnormally late planting date. This indicates that vegetative growth is more responsive than seed yield to earlier and more frequent irrigation, and that increases in vegetative growth do not translate directly to increased marketable seed yield. Contrary to the expected increase in Stemphylium leaf spot severity with increasing irrigation, the severity decreased in both years it was measured, likely as a result of the small stature of the spinach seed parent lines used in our study and opportunistic pathogenicity on moisture-stressed plants. These results provide a useful foundation from which spinach seed producers can make irrigation management decisions for their crops that underpin a valuable global industry. [ABSTRACT FROM AUTHOR]

Background: Aconitum carmichaelii Debx. has been widely used as a traditional medicinal herb for a long history in China. It is highly susceptible to various dangerous diseases during the cultivation process. Downy mildew is the most serious leaf disease of A. carmichaelii, affecting plant growth and ultimately leading to a reduction in yield. To better understand the response mechanism of A. carmichaelii leaves subjected to downy mildew, the contents of endogenous plant hormones as well as transcriptome sequencing were analyzed at five different infected stages. Results: The content of 3-indoleacetic acid, abscisic acid, salicylic acid and jasmonic acid has changed significantly in A. carmichaelii leaves with the development of downy mildew, and related synthetic genes such as 9-cis-epoxycarotenoid dioxygenase and phenylalanine ammonia lyase were also significant for disease responses. The transcriptomic data indicated that the differentially expressed genes were primarily associated with plant hormone signal transduction, plant-pathogen interaction, the mitogen-activated protein kinase signaling pathway in plants, and phenylpropanoid biosynthesis. Many of these genes also showed potential functions for resisting downy mildew. Through weighted gene co-expression network analysis, the hub genes and genes that have high connectivity to them were identified, which could participate in plant immune responses. Conclusions: In this study, we elucidated the response and potential genes of A. carmichaelii to downy mildew, and observed the changes of endogenous hormones content at different infection stages, so as to contribute to the further screening and identification of genes involved in the defense of downy mildew. [ABSTRACT FROM AUTHOR]

Oomycetes are filamentous organisms that resemble fungi in terms of morphology and life cycle, primarily due to convergent evolution. The success of pathogenic oomycetes lies in their ability to adapt and overcome host resistance, occasionally transitioning to new hosts. During plant infection, these organisms secrete effector proteins and other compounds during plant infection, as a molecular arsenal that contributes to their pathogenic success. Genomic sequencing, transcriptomic analysis, and proteomic studies have revealed highly diverse effector repertoires among different oomycete pathogens, highlighting their adaptability and evolution potential. The obligate biotrophic oomycete Plasmopara viticola affects grapevine plants (Vitis vinifera L.) causing the downy mildew disease, with significant economic impact. This disease is devastating in Europe, leading to substantial production losses. Even though Plasmopara viticola is a well-known pathogen, to date there are scarce reviews summarising pathogenicity, virulence, the genetics and molecular mechanisms of interaction with grapevine. This review aims to explore the current knowledge of the infection strategy, lifecycle, effector molecules, and pathogenicity of Plasmopara viticola. The recent sequencing of the Plasmopara viticola genome has provided new insights into understanding the infection strategies employed by this pathogen. Additionally, we will highlight the contributions of omics technologies in unravelling the ongoing evolution of this oomycete, including the first in-plant proteome analysis of the pathogen. [ABSTRACT FROM AUTHOR]

In viticulture, downy mildew is one of the most common diseases that, if not adequately treated, can diminish production yield. However, the uncontrolled use of pesticides to alleviate its occurrence can pose significant risks for farmers, consumers, and the environment. This paper presents a new framework for the early detection and estimation of the mildew's appearance in viticulture fields. The framework utilizes a protocol for the real-time acquisition of drones' high-resolution RGB images and a cloud-docker-based video or image inference process using object detection CNN models. The authors implemented their framework proposition using open-source tools and experimented with their proposed implementation on the debina grape variety in Zitsa, Greece, during downy mildew outbursts. The authors present evaluation results of deep learning Faster R-CNN object detection models trained on their downy mildew annotated dataset, using the different object classifiers of VGG16, ViTDet, MobileNetV3, EfficientNet, SqueezeNet, and ResNet. The authors compare Faster R-CNN and YOLO object detectors in terms of accuracy and speed. From their experimentation, the embedded device model ViTDet showed the worst accuracy results compared to the fast inferences of YOLOv8, while MobileNetV3 significantly outperformed YOLOv8 in terms of both accuracy and speed. Regarding cloud inferences, large ResNet models performed well in terms of accuracy, while YOLOv5 faster inferences presented significant object classification losses. [ABSTRACT FROM AUTHOR]

Downy mildew of grapevine (Vitis vinifera), caused by the oomycete Plasmopara viticola, is an important disease that is present in cultivation areas worldwide, and using resistant varieties provides an environmentally friendly alternative to fungicides. DOWNY MILDEW RESISTANT 6 (DMR6) from Arabidopsis is a negative regulator of plant immunity and its loss of function confers resistance to downy mildew. In grapevine, DMR6 is present in two copies, named VvDMR6-1 and VvDMR6-2. Here, we describe the editing of VvDMR6-1 in embryogenic calli using CRISPR/Cas9 and the regeneration of the edited plants. All edited plants were found to be biallelic and chimeric, and whilst they all showed reduced growth compared with non-transformed control plants, they also had reduced susceptibility to P. viticola. Comparison between mock-inoculated genotypes showed that all edited lines presented higher levels of salicylic acid than controls, and lines subjected to transformation presented higher levels of cis-resveratrol than controls. Our results identify VvDMR6-1 as a promising target for breeding grapevine cultivars with improved resistance to downy mildew. [ABSTRACT FROM AUTHOR]

Downy mildew caused by Hyaloperonospora brassicae is a severe disease in Brassica oleracea that significantly reduces crop yield and marketability. This study aims to evaluate different vegetation indices to assess different downy mildew infection levels in the Brassica variety Mildis using hyperspectral data. Artificial inoculation using H. brassicae sporangia suspension was conducted to induce different levels of downy mildew disease. Spectral measurements, spanning 350 nm to 1050 nm, were conducted on the leaves using an environmentally controlled setup, and the reflectance data were acquired and processed. The Successive Projections Algorithm (SPA) and signal sensitivity calculation were used to extract the most informative wavelengths that could be used to develop downy mildew indices (DMI). A total of 37 existing vegetation indices and three proposed DMIs were evaluated to indicate downy mildew (DM) infection levels. The results showed that the classification using a support vector machine achieved accuracies of 71.3%, 80.7%, and 85.3% for distinguishing healthy leaves from DM1 (early infection), DM2 (progressed infection), and DM3 (severe infection) leaves using the proposed downy mildew index. The proposed new downy mildew index potentially enables the development of an automated DM monitoring system and resistance profiling in Brassica breeding lines. [ABSTRACT FROM AUTHOR]

Spinach (Spinacia oleracea) is an economically important leafy vegetable grown in the United States and world-wide. The downy mildew pathogen, Peronospora effusa (Pfs), is a major biotic constraint impacting spinach production and quality. The use of resistant cultivars is an economical and environmentally-friendly management option especially in organic production systems. As new races of the pathogen continue to appear, there is a need to continue to select for resistance to the emerging races. The objectives of this study were to evaluate a set of spinach hybrids and F2 breeding populations for resistance to Pfs race 5 to develop a better understanding of the genetics of downy mildew resistance. Also, we screened 39 commercial spinach cultivars for resistance to a recently identified race, Pfs race 19. The genetics of resistance to Pfs 5 was determined by greenhouse inoculations of F1 progeny (individual crosses between near isogenic lines, NIL3 or NIL1 and susceptible genotype, Viroflay) and F2 population progeny (cross between Califlay and susceptible Viroflay). Two hybrids were examined for resistance to Pfs 5. The results indicated that resistance conferred at the RPF1 or the RPF3 loci in a heterozygous (Rr) condition to Pfs 5 was completely dominant. Also, Chi-square analysis of the segregation pattern in the F2 population showed that resistance to Pfs race 5 was conferred by a single dominant gene. A total of 22 out of 39 spinach commercial cultivars were resistant to the newly reported Pfs race 19 and could be used in breeding programs to develop new cultivars with resistance to Pfs 19. [ABSTRACT FROM AUTHOR]

Background: Plant defense against the pathogens can be induced by using different defense inducers. Plants can be treated with elicitors for fast and more intense mobilization of defense responses which can enhance the resistance against biotic or abiotic stresses. Methods: The present study has been undertaken to evaluate the synergistic effect of different plant defense inducing chemical (Salicylic acid, Isonicotinic acid, Oxalic acid and Chitosan) and biological (Trichoderma harzianum and Pseudomonas fluorescens) elicitors. Enzyme activity was expressed as the increase in absorbance using spectrophotometer. Result: Among all the treatments the maximum PAL activity (35.58 mg/g of fresh weight) was found in case of oxalic acid but after 48 hrs its activity reduced drastically. Next to oxalic acid Pseudomonas fluorescens (31.38 mg/g of fresh weight), chitosan + Trichoderma harzianum (29.38 mg/g of fresh weight) and chitosan + Pseudomonas fluorescens (27.89 mg/g of fresh weight) showed the maximum enzyme activity. The PPO activity reached the highest at 96 hr after challenge inoculation in case of chitosan + Trichoderma harzianum (9.74 µmol/min/mg/protein) treated plants followed by Trichoderma harzianum (3.53 µmol/min/mg/protein) alone. the maximum PO activity (49.12 µmol/min/mg/protein) was found in case of chitosan + Pseudomonas fluorescens treated plants followed by chitosan (42.48 µmol/min/mg/protein) after 72 hrs. the maximum phenolics (27.53 mg/gm of fresh weight) was found in case of chitosan + Pseudomonas fluorescens after 48 hrs of treatment. [ABSTRACT FROM AUTHOR]

Survey on cucumber plants at four Governorates in Egypt, revealed, root rot, gray mould blight and downy mildew a epidemic diseases. High incidence of root rot disease syndromes on cucumber plants in Kafr El-Sheickh (81.4%) followed by El - Giza (40%) Governorates, the common fungi associated were Fusarium solani and Fusarium oxysporum with high frequency of F. solani (84.2%) in Kafr El-Sheickh followed by F. oxysporum (75.0%) in El-Giza Governorates. Gray mould disease incidence of immature cucumber fruits was (35%) mainly caused by fungal of Botrytis cinerea with high frequency (90%) in El-Gharbeia Governorate. Downy mildew disease incidence of cucumber plants caused by Pseudoperonospora cubensis was epidemic in El-Gharbeia Governorate (80.0%) with high disease severity. On the other hand, the minor diseases occurrence were powdery mildew caused by Podosphaera fusca, moderately recorded at El-Giza followed Kafr El-Sheickh Governorates and white stem rot caused by fungi of Sclerotinia sclerotiorum in El-Beheira and El-Gharbeia Governorates respectively. So, the alternative fungicides such as biocontrol agents, chemicals non fungicides i.e., antioxidants, essential oils, and nanoparticles as eco-friendly agents will be consideration in integrated programme for avoiding diseases development to epidemic case, for improving yield quality and quantity. [ABSTRACT FROM AUTHOR]

Fungal pathogens Plasmopara viticola (Berk. & M.A. Curtis) Berl. & De Toni (downy mildew) and Erysiphe necator Schwein. (powdery mildew) represent the biggest threats for grape growers worldwide. Under suitable conditions, these pathogens can spread very quickly through vineyards and cause significant damage. The most ecological way to reduce the possibility of infection in vineyards is growing interspecific genotypes which are able to suppress these pathogens and stop the spread of infection. With this in mind, 9 international and 11 Czech grapevine genotypes were analysed in order to genotype the resistance loci present in them. As a tool a set of SSR markers linked to known loci of resistance to downy and powdery mildew was used. Namely, presence of four loci responsible for resistance to Plasmopara viticola (Rpv3, Rpv4, Rpv7, and Rpv10) and two for Erysiphe necator (Ren3 and Ren9) were analysed with respective SSR markers. By this way the degree of resistance gene pyramiding was newly assessed in all analysed cultivars and their perspectives in grapevine breeding are discussed. [ABSTRACT FROM AUTHOR]

Downy mildew caused by Sclerospora graminicola is a systemic infectious disease affecting foxtail millet production in Africa and Asia. S. graminicola-infected leaves could be decomposed to a state where only the veins remain, resulting in a filamentous leaf tissue symptom. The aim of the present study was to investigate how S. graminicola influences the formation of the filamentous leaf tissue symptoms in hosts at the morphological and molecular levels. We discovered that vegetative hyphae expanded rapidly, with high biomass accumulated at the early stages of S. graminicola infection. In addition, S. graminicola could affect spikelet morphological development at the panicle branch differentiation stage to the pistil and stamen differentiation stage by interfering with hormones and nutrient metabolism in the host, resulting in hedgehog-like panicle symptoms. S. graminicola could acquire high amounts of nutrients from host tissues through secretion of ß-glucosidase, endoglucanase, and pectic enzyme, and destroyed host mesophyll cells by mechanical pressure caused by rapid expansion of hyphae. At the later stages, .S', graminicola could rapidly complete sexual reproduction through tryptophan, fatty acid, starch, and sucrose metabolism and subsequently produce numerous oospores. Oospore proliferation and development further damage host leaves via mechanical pressure, resulting in a large number of degraded and extinct mesophyll cells and, subsequently, malformed leaves with only veins left, that is, "filamentous leaf tissue." Our study revealed the S. graminicola expansion characteristics from its asexual to sexual development stages, and the potential mechanisms via which the destructive effects of S. graminicola on hosts occur at different growth stages. [ABSTRACT FROM AUTHOR]

Melon (Cucumis melo L.) represents an agriculturally significant horticultural crop that is widely grown for its flavorful fruits. Downy mildew (DM), a pervasive foliar disease, poses a significant threat to global melon production. Although several quantitative trait loci related to DM resistance have been identified, the comprehensive genetic underpinnings of this resistance remain largely uncharted. In this study, we utilized integrative transcriptomics and metabolomics approaches to identify potential resistance-associated genes and delineate the strategies involved in the defense against DM in two melon cultivars: the resistant 'PI442177′ ('K10-1′) and the susceptible 'Huangdanzi' ('K10-9′), post-P. cubensis infection. Even in the absence of the pathogen, there were distinctive differentially expressed genes (DEGs) between 'K10-1′ and 'K10-9′. When P. cubensis was infected, certain genes, including flavin-containing monooxygenase (FMO), receptor-like protein kinase FERONIA (FER), and the HD-ZIP transcription factor member, AtHB7, displayed pronounced expression differences between the cultivars. Notably, our data suggest that following P. cubensis infection, both cultivars suppressed flavonoid biosynthesis via the down-regulation of associated genes whilst concurrently promoting lignin production. The complex interplay of transcriptomic and metabolic responses elucidated by this study provides foundational insights into melon's defense mechanisms against DM. The robust resilience of 'K10-1′ to DM is attributed to the synergistic interaction of its inherent transcriptomic and metabolic reactions. [ABSTRACT FROM AUTHOR]

BACKGROUND: In recent years, hydroponically cultivated basil has gained extensive popularity over soil‐based cultivation. Evidence for potential differences between both cultivation methods, in terms of resistance to biotic and abiotic stress factors, storage properties and shelf‐life, is still lacking and the potential effect of cultivation method on the antioxidant capacity has not yet been fully explored. This study aimed to determine which of the two basil cultivation methods produces plants that are more resilient to downy mildew and external heat treatment and that exhibit better storage and shelf‐life performance. RESULTS: Hydroponically grown basil was significantly more affected by browning than the soil‐grown basil at the end of the storage and end of the shelf‐life period. Under both cultivation methods, the extent of browning increased significantly between the end of the storage and end of the shelf‐life period, by a factor of 1.4. Moreover, hydroponically grown plants were significantly more sensitive to heat treatment than soil‐grown basil. However, the soil‐grown basil exhibited significantly greater susceptibility to downy mildew than the hydroponically grown basil. At harvest, and at the end of the storage period, the antioxidant capacity of hydroponically cultivated basil was significantly greater than that of soil‐grown basil. CONCLUSIONS: Hydroponically cultivated basil exhibited greater resistance to downy mildew, but less resilience to heat and browning during storage and a shelf‐life period, resulting in poorer storage and shelf‐life performance as compared to soil‐cultivated basil. The greater total antioxidant capacity of the hydroponically cultivated basil seems to be the major cause for the observed phenomena. © 2023 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. [ABSTRACT FROM AUTHOR]

Downy mildew caused by the obligate parasite Hyaloperonospora brassicae is a devastating disease for Brassica species. Infection of Hyaloperonospora brassicae often leads to yellow spots on leaves, which significantly impacts quality and yield of pakchoi. In the present study, we conducted a comparative transcriptome between the resistant and susceptible pakchoi cultivars in response to Hyaloperonospora brassicae infection. A total of 1073 disease-resistance-related differentially expressed genes were identified using a Venn diagram. The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses revealed that these genes were mainly involved in plant−pathogen interaction, plant hormone signal transduction, and other photosynthesis-related metabolic processes. Analysis of the phytohormone content revealed that salicylic acid increased significantly in the resistant material after inoculation with Hyaloperonospora brassicae, whereas the contents of jasmonic acid, abscisic acid, and 1-aminocyclopropane-1-carboxylic acid decreased. Exogenous salicylic acid treatment also significantly upregulated Hyaloperonospora brassicae-induced genes, which further confirmed a crucial role of salicylic acid during pakchoi defense against Hyaloperonospora brassicae. Based on these findings, we suggest that the salicylic-acid-mediated signal transduction contributes to the resistance of pakchoi to downy mildew, and PAL1, ICS1, NPR1, PR1, PR5, WRKY70, WRKY33, CML43, CNGC9, and CDPK15 were involved in this responsive process. Our findings evidently contribute to revealing the molecular mechanism of pakchoi defense against Hyaloperonospora brassicae. [ABSTRACT FROM AUTHOR]

Summary: The plant cell wall is the first line of defence against physical damage and pathogen attack. Wall‐associated kinase (WAK) has the ability to perceive the changes in the cell wall matrix and transform signals into the cytoplasm, being involved in plant development and the defence response. Downy mildew, caused by Hyaloperonospora brassicae, can result in a massive loss in Chinese cabbage (Brassica rapa L. ssp. pekinensis) production. Herein, we identified a candidate resistant WAK gene, BrWAK1, in a major resistant quantitative trait locus, using a double haploid population derived from resistant inbred line T12–19 and the susceptible line 91–112. The expression of BrWAK1 could be induced by salicylic acid and pathogen inoculation. Expression of BrWAK1 in 91–112 could significantly enhance resistance to the pathogen, while truncating BrWAK1 in T12–19 increased disease susceptibility. Variation in the extracellular galacturonan binding (GUB) domain of BrWAK1 was found to mainly confer resistance to downy mildew in T12–19. Moreover, BrWAK1 was proved to interact with BrBAK1 (brassinosteroid insensitive 1 associated kinase), resulting in the activation of the downstream mitogen‐activated protein kinase (MAPK) cascade to trigger the defence response. BrWAK1 is the first identified and thoroughly characterized WAK gene conferring disease resistance in Chinese cabbage, and the plant biomass is not significantly influenced by BrWAK1, which will greatly accelerate Chinese cabbage breeding for downy mildew resistance. [ABSTRACT FROM AUTHOR]

Hyaloperonospora parasitica is a global pathogen that can cause leaf necrosis and seedling death, severely threatening the quality and yield of cabbage. However, the genome sequence and infection mechanisms of H. parasitica are still unclear. Here, we present the first whole-genome sequence of H. parasitica isolate BJ2020, which causes downy mildew in cabbage. The genome contains 4631 contigs and 9991 protein-coding genes, with a size of 37.10 Mb. The function of 6128 genes has been annotated. We annotated the genome of H. parasitica strain BJ2020 using databases, identifying 2249 PHI-associated genes, 1538 membrane transport proteins, and 126 CAZy-related genes. Comparative analyses between H. parasitica, H.arabidopsidis, and H. brassicae revealed dramatic differences among these three Brassicaceae downy mildew pathogenic fungi. Comprehensive genome-wide clustering analysis of 20 downy mildew-causing pathogens, which infect diverse crops, elucidates the closest phylogenetic affinity between H. parasitica and H. brassicae, the causative agent of downy mildew in Brassica napus. These findings provide important insights into the pathogenic mechanisms and a robust foundation for further investigations into the pathogenesis of H. parasitica BJ2020. [ABSTRACT FROM AUTHOR]

Sweet corn (Zea mays saccharata Sturt) is one of the most well-known horticultural crop commodities and can adapt to various climates and environments. Efforts to control downy mildew disease continue to be carried out in collaboration with various parties in different ways, including genetic improvement of the varieties planted. The purpose of this study was to test the resistance of the 7th generation of sweet corn inbred lines to downy mildew and to find out the phenotypic characters that affect downy mildew. The new inbred lines obtained from the results of a long breeding process will be better tested for resistance to downy mildew before crosses are carried out among these inbred lines to guarantee better the development of new varieties of sweet corn that are resistant to downy mildew. The experiment was conducted from August to November 2019 in Getasrejo, Grobogan, and Central Java. The material consisted of 10 kinds of maize inbred line seeds and two comparison varieties. The experiment was carried out using a randomized block design with three replications. One of the obstacles that is difficult to overcome in sweet corn cultivation is downy mildew disease (Peronosclerospora spp.). The conclusions of this study were: (1) Inbred lines HSJM 08, HSJM 06, HSJM 07, HSJM 02, HSJM 05, HSJM 04, and HSJM 01 were categorized as highly resistant genotypes. HSJM 09 can be categorized as a resistant inbred line. Inbred lines HSJM 10 and HSJM 03 were classified as moderately resistant genotypes. (2) The characters of leaf width, leaf length, leaf wet weight, leaf dry weight, and leaf moisture content can be considered in determining selection criteria against downy mildew disease on sweet corn. [ABSTRACT FROM AUTHOR]

Background: Chamomile (Matricaria chamomile L.) is one of the very important medicinal plants worldwide, particularly in Egypt. The downy mildew disease is considered one of the most important diseases of chamomile. Peronospora farinose was identified as the causal pathogen of downy mildew of infected chamomile plants, collected from Fayoum Governorate, Egypt, during 2022. Results: Efficiency of some fungicidal alternatives for management of downy mildew disease on chamomile leaves was evaluated in vitro studies using detached leaves technique. Each of the biocide, Bio-Cure F and Thyme oil emulsion treatments, before and after the fungal inoculation, respectively, was the best effective treatments, which reduced disease incidence to the lowest percentages. However, the treatment of Bio-Cure F before the fungal inoculation had the superiority for reducing disease severity to the lowest percentage, followed by Thyme oil emulsion, after the fungal inoculation. On the other hand, under greenhouse conditions, the best treatment reduced disease incidence and disease severity to the lowest percentages was Thyme oil emulsion, followed by Bio-Cure F, after and before the fungal inoculation, respectively. Total sugars content was obviously lower in treated chamomile plants before and after the fungal inoculation than in untreated controls. On the contrary, free phenols were obviously higher in treated chamomile plants before and after the fungal inoculation than in untreated controls. Conclusion: The present study indicated the possibility of using Bio-Cure F (biocide) and Thyme essential oil emulsion as spraying treatment against P. farinosa on chamomile plants. [ABSTRACT FROM AUTHOR]

Downy mildew is one of the most important diseases of sunflower crop around the world caused by Plasmopara halstedii (Farl.) Berl.et de Toni. The aim of our study is the sunflower hybrid development with the durable resistance to downy mildew, combining one parental line with the most effective for the specific location major gene (Pl15 for example) and the second parental line – with a high horizontal resistance to downy mildew. Experiments were conducted at All-Russia Research Institute of Oil Crops in 2016–2021. Experimental design was randomized blocks with three replications. CMS-lines with the highest level of horizontal resistance (VK 678, VA 732, VK 680, VK 934, VK 900 and new line SL 0516) were used as mother parents. Lines with Pl15, resistant to all the downy mildew races were used as pollinators to create sunflower hybrids with durable resistance to downy mildew. A number of high-productive sunflower hybrids with durable resistance to DM (VK 732А × L 642-15, VK 732А × L 634-15, VK 680А × L 642-15, VK 680А × L 634-15, VK 934А × L 642-15 and VK 678А × L 634-15) were developed and tested. [ABSTRACT FROM AUTHOR]

Chitosan is known for its antimicrobial and antifungal properties that make it a promising candidate for plant protection. However, when sprayed in open fields, the bioactivity of chitosan significantly diminishes, suggesting a possible influence of sunlight on chitosan structure. This study aimed to investigate the effects of UV radiation, by using artificial UV sources simulating sunlight, on the stability of chitosan. A powdered chitosan with a low polymerization degree was selected and analyzed using various physicochemical methods, both before and after irradiation. Some minor differences appeared. UV spectra analysis revealed the disappearance of initially present chromophores and the emergence of a new band around 340 nm, potentially indicating the formation of carbonyl compounds. However, elemental analysis, MALDI-TOF spectra, polymerization degree, and infrared spectra did not exhibit any clear structural modifications of chitosan. Interestingly, irradiated powdered chitosan samples maintained their bioactivity, including their eliciting and antifungal properties. In the case of grapevine, irradiated chitosan demonstrated effectiveness in controlling grapevine diseases such as downy mildew, contradicting the assumption that sunlight is responsible for the decreased effectiveness of chitosan in open field conditions. [ABSTRACT FROM AUTHOR]

Maize (Zea mays L.) is one of the staple foodstuffs of the cereal group which has a high percentage of carbohydrates, protein, water, and fats. In 2050, maize is expected to double in demand, however, productivity must be balanced with the support management of diseases and pests of maize. Common maize disease is Downy mildew caused by Peronosclerospora spp., this disease attacks the leaves and seeds with 100% damage. This research aimed to determine the pathogenicity and resistance of Talenta, Pioneer 21, and Tamara maize varieties, by using in vivo leaf insertion and leaf spray methods. Fungal isolates were isolated from threshing conidia from maize leaves in the Sleman area field. Observation of fungal pathogenicity and maize resistance was measured based on symptom scale per two days of test and observation of leaf anatomy 45 days after planting. Calculation of fungal pathogenicity against maize varieties used growth analysis, disease incidence, disease severity, Area Under the Disease Progress Curve (AUDPC), and severity unit per time. The result of this research showed that Talenta was moderately resistant, Pioneer-21 was resistant, and Tamara was susceptible to Downy mildew. Downy mildew pathogenicity rate reached 0,07 units/day. Downy mildew infection reached epidermis tissue through stomata on maize leaves. [ABSTRACT FROM AUTHOR]

Pearl millet [Pennisetum glaucum (L.) R. Br.] is the essential food crop for over ninety million people living in drier parts of India and South Africa. Pearl millet crop production is harshly hindered by numerous biotic stresses. Sclerospora graminicola causes downy mildew disease in pearl millet. Effectors are the proteins secreted by several fungi and bacteria that manipulate the host cell structure and function. This current study aims to identify genes encoding effector proteins from the S. graminicola genome and validate them through molecular techniques. In silico analyses were employed for candidate effector prediction. A total of 845 secretory transmembrane proteins were predicted, out of which 35 proteins carrying LxLFLAK (Leucine–any amino acid–Phenylalanine–Leucine–Alanine–Lysine) motif were crinkler, 52 RxLR (Arginine, any amino acid, Leucine, Arginine), and 17 RxLR-dEER putative effector proteins. Gene validation analysis of 17 RxLR-dEER effector protein-producing genes was carried out, of which 5genes were amplified on the gel. These novel gene sequences were submitted to NCBI. This study is the first report on the identification and characterization of effector genes in Sclerospora graminicola. This dataset will aid in the integration of effector classes that act independently, paving the way to investigate how pearl millet responds to effector protein interactions. These results will assist in identifying functional effector proteins involving the omic approach using newer bioinformatics tools to protect pearl millet plants against downy mildew stress. Considered together, the identified effector protein-encoding functional genes can be utilized in screening oomycetes downy mildew diseases in other crops across the globe. [ABSTRACT FROM AUTHOR]

Downy mildew is a disease caused by the fungus Peronosclerospora maydis. Application of biological agents to control downy mildew is a kind of environmentally friendly control method, that widely promoted recently. Trichoderma sp. and plant growth promoter rhizobacteria (PGPR) are root symbionts, which can induce plant resistance against disease infection. This study aimed to determine the effective application of Trichoderma sp. combined with various concentrations of rhizobacteria to control downy mildew. This study used a completely randomized design (CRD) method with 6 treatments and 5 replications. The treatment was the concentration of rhizobacteria consisting of P0 (control) = without treatment, P1= 15 mL L-1. P2 = 30 mL L-1. P3 = 45 mL L-1. P4 = 60 mL L-1 and P5 (positive control) = seed treatment with 5 g kg-1 dimetomorf fungicide. Each rhizobacteria suspension was mixed with Trichoderma sp. solution as much as 15 mL L-1. The parameters observed consisted of plant height (cm), number of leaves, disease incidence (%), and disease severity (%). The results showed that the combination of Trichoderma sp. and rhizobacteria of 60 mL L-1 was able to inhibit the incidence of the disease up to 66.53% and the severity of the disease up to 89.84%. [ABSTRACT FROM AUTHOR]

Downy mildew disease of sunflower, caused by the obligate biotrophic oomycete Plasmopara halstedii, can have significant economic impact on sunflower cultivation. Using high-throughput whole transcriptome sequencing, four developmental phases in 16 time-points of Pl. halstedii infecting Helianthus annuus were investigated. With the aim of identifying potential functional and regulatory motifs upstream of co-expressed genes, time-series derived gene expression profiles were clustered based on their time-course similarity, and their upstream regulatory gene sequences were analyzed here. Several conserved motifs were found upstream of co-expressed genes, which might be involved in binding specific transcription factors. Such motifs were also found associated with virulence related genes, and could be studied on a genetically tractable model to clarify, if these are involved in regulating different stages of pathogenesis. [ABSTRACT FROM AUTHOR]

Downy mildew caused by oomycete pathogen Plasmopara viticola is a devastating disease of grapevine. P. viticola secretes an array of RXLR effectors to enhance virulence. One of these effectors, PvRXLR131, has been reported to interact with grape (Vitis vinifera) BRI1 kinase inhibitor (VvBKI1). BKI1 is conserved in Nicotiana benthamiana and Arabidopsis thaliana. However, the role of VvBKI1 in plant immunity is unknown. Here, we found transient expression of VvBKI1 in grapevine and N. benthamiana increased its resistance to P. viticola and Phytophthora capsici, respectively. Furthermore, ectopic expression of VvBKI1 in Arabidopsis can increase its resistance to downy mildew caused by Hyaloperonospora arabidopsidis. Further experiments revealed that VvBKI1 interacts with a cytoplasmic ascorbate peroxidase, VvAPX1, an ROS-scavenging protein. Transient expression of VvAPX1 in grape and N. benthamiana promoted its resistance against P. viticola, and P. capsici. Moreover, VvAPX1 transgenic Arabidopsis is more resistant to H. arabidopsidis. Furthermore, both VvBKI1 and VvAPX1 transgenic Arabidopsis showed an elevated ascorbate peroxidase activity and enhanced disease resistance. In summary, our findings suggest a positive correlation between APX activity and resistance to oomycetes and that this regulatory network is conserved in V. vinifera, N. benthamiana, and A. thaliana. [ABSTRACT FROM AUTHOR]

The production of high-quality wines is strictly related to the correct management of the vineyard, which guarantees good yields and grapes with the right characteristics required for subsequent vinification. Winegrowers face a variety of challenges during the grapevine cultivation cycle: the most notorious are fungal and oomycete diseases such as downy mildew, powdery mildew, and gray mold. If not properly addressed, these diseases can irremediably compromise the harvest, with disastrous consequences for the production and wine economy. Conventional defense methods used in the past involved chemical pesticides. However, such approaches are in conflict with the growing attention to environmental sustainability and shifts from the uncontrolled use of chemicals to the use of integrated approaches for crop protection. Improvements in genetic knowledge and the availability of novel biotechnologies have created new scenarios for possibly producing grapes with a reduced, if not almost zero, impact. Here, the main approaches used to protect grapevines from fungal and oomycete diseases are reviewed, starting from conventional breeding, which allowed the establishment of new resistant varieties, followed by biotechnological methods, such as transgenesis, cisgenesis, intragenesis, and genome editing, and ending with more recent perspectives concerning the application of new products based on RNAi technology. Evidence of their effectiveness, as well as potential risks and limitations based on the current legislative situation, are critically discussed. [ABSTRACT FROM AUTHOR]

Downy mildew, caused by Peronospora variabilis, is the most important quinoa disease worldwide. However, little is known about the resistance mechanisms acting against this disease. The study goals were to identify quinoa accessions showing resistance to P. variabilis under Spanish field conditions and to characterize the resistance mechanism involved. Towards these objectives, a total amount of 229 accessions of Chenopodium quinoa and one accession of each of the species Chenopodiun berlandieri subs. nutillae, Chenopodium ugandae, and Chenopodium opulifolium were screened for resistance to P. variabilis under field conditions in Córdoba, Spain, during two seasons. The response to P. variabilis in the accessions showed a continuous distribution ranging from complete resistance to high susceptibility. Fifteen resistant and one susceptible accessions were selected for further histological studies. Histological results showed that resistance to downy mildew in quinoa acts mainly at the stage of colony establishment. In resistant accessions, no colonies were formed or success in colony establishment was significantly reduced compared with the susceptible control. Hypersensitive response was associated with colony abortion in a number of the resistant accessions. This work is the first proof of hypersensitive reaction occurrence in quinoa as a response to P. variabilis. [ABSTRACT FROM AUTHOR]

Vitis vinifera L. is highly susceptible to the biotrophic pathogen Plasmopara viticola. To control the downy mildew disease, several phytochemicals are applied every season. Recent European Union requirements to reduce the use of chemicals in viticulture have made it crucial to use alternative and more sustainable approaches to control this disease. Our previous studies pinpoint the role of fatty acids and lipid signalling in the establishment of an incompatible interaction between grapevine and P. viticola. To further understand the mechanisms behind lipid involvement in an effective defence response we have analysed the expression of several genes related to lipid metabolism in three grapevine genotypes: Chardonnay (susceptible); Regent (tolerant), harbouring an Rpv3-1 resistance loci; and Sauvignac (resistant) that harbours a pyramid of Rpv12 and Rpv3-1 resistance loci. A highly aggressive P. viticola isolate was used (NW-10/16). Moreover, we have characterised the grapevine phospholipases C and D gene families and monitored fatty acid modulation during infection. Our results indicate that both susceptible and resistant grapevine hosts did not present wide fatty acid or gene expression modulation. The modulation of genes associated with lipid signalling and fatty acids seems to be specific to Regent, which raises the hypothesis of being specifically linked to the Rpv3 loci. In Sauvignac, the Rpv12 may be dominant concerning the defence response, and, thus, this genotype may present the activation of other pathways rather than lipid signalling. [ABSTRACT FROM AUTHOR]

The aim of this study was to contribute to the reduction of synthetic chemical fungicide application in viticulture by using cyclo(- l -Leu- l -Phe) (cLF) produced by Bacillus subtilis KS1, a candidate for biological control agent. cLF is a diketopiperazine and belongs to the family of 2,5-diketopiperazines. KS1 secreted micromolar levels of cLF into culture medium. Micromolar concentrations of cLF structure-dependently decreased by ∼90% both disease severity and lesion density of downy mildew in grapevine cultivated in a growth chamber. Microscopic observation demonstrated that cLF inhibited Plasmopara viticola haustorium formation by 80% but not zoospore germination on leas disks. Interestingly, millimolar concentrations of cLF induced plant defense response, such as expression of genes encoding chitinase and β-1,3-glucanase, in grapevine leaves through the salicylic acid and jasmonate signaling pathways. We demonstrated that cLF was a weapon against P. viticola infection. Further evaluation of cLF in field trials is required to uncover its inherent characteristics. [ABSTRACT FROM AUTHOR]

Background: Downy mildew of foxtail millet, which is caused by the biotrophic oomycete Sclerospora graminicola (Sacc.) Schroeter, is one of the most disruptive diseases. The foxtail millet-S. graminicola interaction is largely unexplored. Transcriptome sequencing technology can help to reveal the interaction mechanism between foxtail millet and its pathogens. Results: Transmission electron microscopy observations of leaves infected with S. graminicola showed that the structures of organelles in the host cells gradually became deformed and damaged, or even disappeared from the 3- to 7-leaf stages. However, organelles in the leaves of resistant variety were rarely damaged. Moreover, the activities of seven cell wall degrading enzymes in resistant and susceptible varieties were also quite different after pathogen induction and most of enzymes activities were significantly higher in the susceptible variety JG21 than in the resistant variety G1 at all stages. Subsequently, we compared the transcriptional profiles between the G1 and JG21 in response to S. graminicola infection at 3-, 5-, and 7-leaf stages using RNA-Seq technology. A total of 473 and 1433 differentially expressed genes (DEGs) were identified in the resistant and susceptible varieties, respectively. The pathway analysis of the DEGs showed that the highly enriched categories were related to glutathione metabolism, plant hormone signalling, phenylalanine metabolism, and cutin, suberin and wax biosynthesis. Some defence-related genes were also revealed in the DEGs, including leucine-rich protein kinase, Ser/Thr protein kinase, peroxidase, cell wall degrading enzymes, laccases and auxin response genes. Our results also confirmed the linkage of transcriptomic data with qRT-PCR data. In particular, LRR protein kinase encoded by Seita.8G131800, Ser/Thr protein kinase encoded by Seita.2G024900 and Seita. 2G024800, which have played an essential resistant role during the infection by S. graminicola. Conclusions: Transcriptome sequencing revealed that host resistance to S. graminicola was likely due to the activation of defence-related genes, such as leucine-rich protein kinase and Ser/Thr protein kinase. Our study identified pathways and genes that contribute to the understanding of the interaction between foxtail millet and S. graminicola at the transcriptomic level. The results will help us better understand the resistance mechanism of foxtail millet against S. graminicola. [ABSTRACT FROM AUTHOR]

Background: Downy mildew of foxtail millet, which is caused by the biotrophic oomycete Sclerospora graminicola (Sacc.) Schroeter, is one of the most disruptive diseases. The foxtail millet-S. graminicola interaction is largely unexplored. Transcriptome sequencing technology can help to reveal the interaction mechanism between foxtail millet and its pathogens. Results: Transmission electron microscopy observations of leaves infected with S. graminicola showed that the structures of organelles in the host cells gradually became deformed and damaged, or even disappeared from the 3- to 7-leaf stages. However, organelles in the leaves of resistant variety were rarely damaged. Moreover, the activities of seven cell wall degrading enzymes in resistant and susceptible varieties were also quite different after pathogen induction and most of enzymes activities were significantly higher in the susceptible variety JG21 than in the resistant variety G1 at all stages. Subsequently, we compared the transcriptional profiles between the G1 and JG21 in response to S. graminicola infection at 3-, 5-, and 7-leaf stages using RNA-Seq technology. A total of 473 and 1433 differentially expressed genes (DEGs) were identified in the resistant and susceptible varieties, respectively. The pathway analysis of the DEGs showed that the highly enriched categories were related to glutathione metabolism, plant hormone signalling, phenylalanine metabolism, and cutin, suberin and wax biosynthesis. Some defence-related genes were also revealed in the DEGs, including leucine-rich protein kinase, Ser/Thr protein kinase, peroxidase, cell wall degrading enzymes, laccases and auxin response genes. Our results also confirmed the linkage of transcriptomic data with qRT-PCR data. In particular, LRR protein kinase encoded by Seita.8G131800, Ser/Thr protein kinase encoded by Seita.2G024900 and Seita. 2G024800, which have played an essential resistant role during the infection by S. graminicola. Conclusions: Transcriptome sequencing revealed that host resistance to S. graminicola was likely due to the activation of defence-related genes, such as leucine-rich protein kinase and Ser/Thr protein kinase. Our study identified pathways and genes that contribute to the understanding of the interaction between foxtail millet and S. graminicola at the transcriptomic level. The results will help us better understand the resistance mechanism of foxtail millet against S. graminicola. [ABSTRACT FROM AUTHOR]

Grapevine, a crop of global economic importance, is annually affected by diseases that can compromise the quality and quantity of the harvest, producing large economic losses. Downy mildew caused by Plasmopara viticola (Berk. & M.A. Curtis) Berl. & de Toni is one of the most important diseases in the vineyard. To fight this pathogen, winegrowers often rely on conventional chemical fungicides or copper-based formulations, whose use is determined to be reduced by the European Commission due to their environmental consequences. Hence, alternative plant protection products (PPP) in grapevine must be considered and studied. In this context, we selected several alternative commercial products, based on basic substances (BS) or low-risk active substances (LRAS), to evaluate their suitability to deal with P. viticola. We measured the preventive activity of the products, both in vitro and in planta, as well as their toxicity against the sporangia and zoospores of the pathogen. Results showed that four commercial products were effective against the pathogen directly and preventively, being composed of approved basic substances, more concretely, chitosan, Equisetum arvense, lecithins, and Salix cortex. Among those, the products composed of lecithins and Salix cortex were the most toxic and active preventively. Therefore, these basic substances should be promoted in the vineyard as an alternative to conventional treatments in order to transition to a more sustainable viticulture. [ABSTRACT FROM AUTHOR]

In recent years, Septoria leaf spot has taken a strong place in the list of economically important diseases of sunflower. It may be a favorable factor for the development of other diseases on sunflower plants too. The aim of the research was to evaluate the frequency and degree of infection of sunflower plants with Septoria helianthi as well as possibility of simultaneous infection with this pathogen and other fungi which cause foliar spots, such as downy mildew, Alternaria leaf spot and Phoma black stem under conditions of stationary infectious nursery. The year 2021 turned out to be extremely favorable for the development of fungal leaf spots on sunflower. Assessment of fungal diseases of sunflower plants was performed in F2 families obtained after crossing ZL22A, ZL58A, ZL70A, ZL78A, and ZL169A lines of Zaporozhye breeding (Ukraine) with HAR7 line (originating from the USA). Each F2 family (sample) was obtained from self-pollination of one F1 plant with varying severity of Septoria disease. It was found that in the conditions of 2021, sunflower was quite affected by Septoria disease. The percentage of injured plants in F2 samples ranged from 41.0 to 100.0%. The severity of disease was different. Less resistant genotypes included plants with lesions on sunflower leaves of lower, middle, and upper tiers in approximately equal numbers, while more resistant genotypes had almost no plants with injured leaves of upper tiers. It was established that the development of Phoma disease occurred both on plants with Septoria leaf spot and on healthy plants. On average, among the plants infected with Phoma macdonaldii, the proportion of plants jointly affected by Phoma and Septoria diseases was 2/3. However, the frequency of simultaneous infection of plants with S. helianthi and P. macdonaldii in genotypes with different resistance to Septoria leaf spot differed significantly and ranged from 80% in less resistant to 40% in more resistant accessions. Most plants (about 90%) infected with Plasmopara halstedii were simultaneously infected with S. helianthi. That is, both of these pathogens can simultaneously develop on the same plant and lead to a decline in its basic physiological functions. The rate of simultaneous damage of sunflower by Alternaria and Septoria was quite low compared to plant damage by Alternaria alone and was less than 30%. This may mean that the pathogen of Alternaria leaf spot avoids plants with existing S. helianthi fungus. [ABSTRACT FROM AUTHOR]

Downy mildew is a major threat to the economic value of spinach. The most effective approach to managing spinach downy mildew is breeding cultivars with resistance genes. The resistance allele RPF2 is effective against races 1–10 and 15 of Peronospora farinosa f. sp. Spinaciae (P. effusa) and is widely used as a resistance gene. However, the gene and the linked marker of RPF2 remain unclear, which limit its utilization. Herein, we located the RPF2 gene in a 0.61 Mb region using a BC1 population derived from Sp39 (rr) and Sp62 (RR) cultivars via kompetitive allele specific PCR (KASP) markers. Within this region, only one R gene, Spo12821, was identified based on annotation information. The amino acid sequence analysis showed that there were large differences in the length of the LRR domain between the parents. Additionally, a molecular marker, RPF2-IN12821, was developed based on the sequence variation in the Spo12821, and the evaluation in the BC1 population produced a 100% match with resistance/susceptibility. The finding of the study could be valuable for improving our understanding of the genetic basis of resistance against the downy mildew pathogen and breeding resistance lines in the future. [ABSTRACT FROM AUTHOR]

Yield losses in sunflower crops caused by Plasmopara halstedii can be up to 100%, depending on the cultivar susceptibility, environmental conditions, and virulence of the pathogen population. The aim of this study was to investigate the genetic and phenotypic structure of a sunflower downy mildew agent at the field scale. The genetic diversity of 250 P. halstedii isolates collected from one field in southern France was assessed using single-nucleotide polymorphisms (SNPs) and single sequence repeats (SSR). A total of 109 multilocus genotypes (MLG) were identified among the 250 isolates collected in the field. Four genotypes were repeated more than 20 times and spatially spread over the field. Estimates of genetic relationships among P. halstedii isolates using principal component analysis and a Bayesian clustering approach demonstrated that the isolates are grouped into two main genetic clusters. A high level of genetic differentiation among clusters was detected (FST = 0.35), indicating overall limited exchange between them, but our results also suggest that recombination between individuals of these groups is not rare. Genetic clusters were highly related to pathotypes, as previously described for this pathogen species. Eight different races were identified (100, 300, 304, 307, 703, 704, 707, and 714), with race 304 being predominant and present at most of the sites. The co-existence of multiple races at the field level is a new finding that could have important implications for the management of sunflower downy mildew. These data provide the first population-wide picture of the genetic structure of P. halstedii at a fine spatial scale. [ABSTRACT FROM AUTHOR]

Onion downy mildew caused by Peronospora destructor has been widespread in Japan since 2016. Soil disinfection and use of fungicides have been implemented as control measures against oospores in the soil, which are the primary source of infection. Measurements of oospore density are needed to clarify the risk of disease development and inform disease management. In this study, an experimental system capable of detecting P. destructor DNA from field samples was developed. A TaqMan probe‐type primer was used to target the coxII (cytochrome c oxidase subunit II) region of the mitochondrial genome of P. destructor and no false positives were observed. Using this method, the detection limit was equivalent to 5 oospores of P. destructor/g soil in grey lowland soil and andosol. The correlation coefficient between oospore density and the primary infection rate was investigated by testing soil samples from 115 fields. Although no correlations between oospore density and the primary infection were observed in pesticide‐treated fields, significant correlations were observed in untreated fields. Continuous cropping of onions increased the oospore density. The correlation between primary and secondary infection was relatively weak, and the negative predictive value of primary infection was relatively high (89.0). These results suggest that the disease‐risk potential of onion downy mildew is very high, and thus it is necessary to set a low pathogen detection threshold. The system presented here provides a highly sensitive method for supporting decision‐making aimed at disease control. [ABSTRACT FROM AUTHOR]

Melon (Cucumis melo L.) production is often restricted by a plethora of pests and diseases, including powdery mildew and downy mildew caused respectively by the fungal species Podosphaera xanthii/Golovinomyces orontii and oomycete species Pseudoperonospora cubensis. Many efforts have been directed on identification of resistant sources by screening (wild) melon germplasm. In the current review, we summarized such efforts from various publications of the last 50 plus years. Resistance to powdery mildew has been identified in 239 melon accessions and downy mildew resistance in 452 accessions of both C. melo and the wild relative species C. figarei. Among the resistance sources, C. melo var. cantalupensis accessions PMR 45, PMR 5, PMR 6, and WMR 29 as well as C. melo var. momordica accessions PI 124111, PI 124112, and PI 414723 have been considered as the most valuable germplasm because multiple resistance genes have been identified from these accessions and are widely used in melon resistance breeding. Further genetic mapping in a number of resistant sources has enabled identification of 25 dominant genes, two recessive genes and seven QTLs conferring powdery mildew resistance, as well as eight dominant genes and 11 QTLs for downy mildew resistances. Based on the reported sequences of associated markers, we anchored physically (many of) these genes and QTLs to chromosomes of the melon cv. DHL92 genome. In addition to presenting a comprehensive overview on powdery mildew and downy mildew resistance in (wild) melon germplasm, we suggest strategies aiming at breeding melon with durable and broad-spectrum resistance to pathogens and pests [ABSTRACT FROM AUTHOR]

Rust and downy mildew (DM) are two important sunflower diseases that lead to significant yield losses globally. The use of resistant hybrids to control rust and DM in sunflower has a long history. The rust resistance genes, R13a and R16, were previously mapped to a 3.4 Mb region at the lower end of sunflower chromosome 13, while the DM resistance gene, Pl33, was previously mapped to a 4.2 Mb region located at the upper end of chromosome 4. High-resolution fine mapping was conducted using whole genome sequencing of HA-R6 (R13a) and TX16R (R16 and Pl33) and large segregated populations. R13a and R16 were fine mapped to a 0.48 cM region in chromosome 13 corresponding to a 790 kb physical interval on the XRQr1.0 genome assembly. Four disease defense-related genes with nucleotide-binding leucine-rich repeat (NLR) motifs were found in this region from XRQr1.0 gene annotation as candidate genes for R13a and R16. Pl33 was fine mapped to a 0.04 cM region in chromosome 4 corresponding to a 63 kb physical interval. One NLR gene, HanXRQChr04g0095641, was predicted as the candidate gene for Pl33. The diagnostic SNP markers developed for each gene in the current study will facilitate marker-assisted selections of resistance genes in sunflower breeding programs. [ABSTRACT FROM AUTHOR]

BACKGROUND The grape volatile fraction determines to a great extent its aroma, which is one of the most important characteristics influencing wine quality and consumer preferences. Grapevine downy mildew (GDM) is one of the most important and devastating diseases of grapevines worldwide. In this study, the impact on the volatile composition of cv. Verdicchio grapes of classical copper formulations, was compared to that of alternative products. Thus, 11 treatments were foliar applied throughout one grapevine cycle. RESULTS: Most of the volatile compounds present in the grapes were not affected by the treatments used in order to prevent GDM. In the case of the total C13 norisoprenoids, some differences were found between grapes untreated control and those applied with the grapefruit seed extract. Moreover, the content of alcohols was smaller in grapes from Bordeaux mixture treatment and higher in the samples from chitosan application. CONCLUSION: Therefore, from the qualitative point of view of the berry, treatment with tested products alternative to copper is recommended, which minimize the environmental and health problems that this heavy metal brings to the soil and in the winery, since it means that their applications did not affect the grape aroma. © 2022 Society of Chemical Industry. [ABSTRACT FROM AUTHOR]

Sulfur is an essential macronutrient for plant growth and development, and sulfate transporter (SULTR) plays key roles in sulfate (SO42-) uptake and transport in higher plants. In this study, 10 SULTR genes (CsaSULTR1;1～CsaSULTR4;1) were identified in cucumber. Phylogenetic analysis showed that SULTRs from cucumber and Arabidopsis could be divided into four groups (GROUP 1～4). Most CsaSULTR genes contained 9～12 introns, and closely related members shared similar gene structures. Promoter analysis revealed that CsaSULTR genes may be involved in responses to hormones and environmental stress. Expression profiling analysis by RNA-seq indicated that CsaSULTR genes have distinct expression patterns in different tissues, and some of them had significantly changed expression in response to downy mildew infection. Our results provide a better understanding for further functional analysis of CsSULTR genes in cucumber. [ABSTRACT FROM AUTHOR]

Downy mildew (DM), caused by P. cubensis, is harmful to cucurbits including luffa, with increased shortcomings associated with its control through cultural practices, chemical fungicides, and resistant cultivars; there is a prompt need for an effective, eco-friendly, economical, and safe biocontrol approach. Current research is therefore dealt with the biocontrol of luffa DM1 through the endophytic fungi (EF) consortium. Results revealed that T. harzianum (ThM9) and T. virens (TvA1) showed pathogen-dependent inducible metabolic production of squalene and gliotoxins by higher gene expression induction of SQS1/ERG9 (squalene synthase) and GliP (non-ribosomal peptide synthetase). Gene expression of lytic enzymes of EF was also induced with subsequently higher enzyme activities upon confrontation with P. cubensis. EF-inoculated luffa seeds showed efficient germination with enhanced growth potential and vigor of seedlings. EF-inoculated plants showed an increased level of growth-promoting hormone GA with higher gene expression of GA2OX8. EF-pre-inoculated seedlings were resistant to DM and showed an increased GSH content and antioxidant enzyme activities (SOD, CAT, POD). The level of MDA, H2O2, REL, and disease severity was reduced by EF. ACC, JA, ABA, and SA were overproduced along with higher gene expression of LOX, ERF, NCED2, and PAL. Expression of defense-marker genes (PPO, CAT2, SOD, APX, PER5, LOX, NBS-LRR, PSY, CAS, Ubi, MLP43) was also modulated in EF-inoculated infected plants. Current research supported the use of EF inoculation to effectively escalate the systemic immunity against DM corresponding to the significant promotion of induced systemic resistance (ISR) and systemic acquired resistance (SAR) responses through initiating the defense mechanism by SA, ABA, ET, and JA biosynthesis and signaling pathways in luffa. [ABSTRACT FROM AUTHOR]