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Long-term habitat mapping and change detection are essential for the management of coastal wetlands as well as for evaluating the impact of conservation policies. Earth observation ( EO) data and techniques are a valuable resource for long-term habitat mapping. Although the use of EO data is well developed for the automatic production of land cover ( LC) maps, this is not the same for habitat maps, which are highly related to biodiversity., In a previous paper, we used the Food and Agricultural Organization ( FAO) Land Cover Classification System ( LCCS) environmental attributes (e.g. water quality, lithology, soil surface aspect) for LC-to-habitat class translation. However, these environmental attributes are often not openly available, not updated or are missing., This paper offers an alternative, knowledge-based solution to automatic habitat mapping. When only expert rules and EO data are used, the final overall map accuracy, which is obtained by comparing reference ground truth patches to the ones depicted in the output map, is lower (75·1%) than the accuracy obtained using environmental attributes alone (97·0%). Some ambiguities that still remain in habitat discrimination are resolved by integrating the use of LCCS environmental attributes (if available) and expert rules., In this paper, we use very high-resolution ( VHR) satellite data and LIDAR data. LC classes are labelled according to the LCCS taxonomy, which offers a framework to integrate EO data with in situ and ancillary data. Output habitat classes are labelled according to the European Habitats Directive (92/43 EEC Directive) Annex I habitat types and Eunis habitat classification. Two Natura 2000 coastal wetland sites in southern Italy are considered., Synthesis and applications. In this paper, we study the exploitation of ecological rules on vegetation pattern, plant phenology and habitat geometric properties for automatic translation of land cover ( LC) maps to habitat maps in coastal wetlands. The methodology is useful for relatively inaccessible sites (e.g. wetlands) as it does not require in-field campaigns (generally costly) but only the elicitation of ecological expert rules. This can support site (e.g. Natura 2000) managers in long-term automatic habitat mapping. Habitat changes can be automatically detected by comparing map pairs, and trends can be quantified. This is particularly useful to satisfy the commitments of the European Habitats Directive (92/43/ EEC), which requires Member States to take measures to maintain as, or restore to, favourable conservation status those natural habitat types and species of community interest that are listed in the Annexes to the Directive. [ABSTRACT FROM AUTHOR]

The present study aims to discriminate four semi-arid grassland habitats in a Mediterranean Natura 2000 site, Southern Italy, involving 6210/E1.263, 62A0/E1.55, 6220/E1.434 and X/E1.61-E1.C2-E1.C4 (according to Annex I of the European Habitat Directive/EUropean Nature Information System (EUNIS) taxonomies). For this purpose, an intra-annual time-series of 30 Sentinel-2 images, embedding phenology information, were investigated for 2018. The methodology adopted was based on a two-stage workflow employing a Support Vector Machine classifier. In the first stage only four Sentinel-2 multi-season images were analyzed, to provide an updated land cover map from where the grassland layer was extracted. The layer obtained was then used for masking the input features to the second stage. The latter stage discriminated the four grassland habitats by analyzing several input features configurations. These included multiple spectral indices selected from the time-series and the Digital Terrain Model. The results obtained from the different input configurations selected were compared to evaluate if the phenology information from time-series could improve grassland habitats discrimination. The highest F1 values (95.25% and 80.27%) were achieved for 6210/E1.263 and 6220/E1.434, respectively, whereas the results remained stable (97,33%) for 62A0/E1.55 and quite low (75,97%) for X/E1.61-E1.C2-E1.C4. However, since for all the four habitats analyzed no single configuration resulted effective, a Majority Vote algorithm was applied to achieve a reduction in classification uncertainty. [ABSTRACT FROM AUTHOR]

To support decisions relating to the use and conservation of protected areas and surrounds, the EU-funded BIOdiversity multi-SOurce monitoring System: from Space TO Species (BIO_SOS) project has developed the Earth Observation Data for HAbitat Monitoring (EODHaM) system for consistent mapping and monitoring of biodiversity. The EODHaM approach has adopted the Food and Agriculture Organization Land Cover Classification System (LCCS) taxonomy and translates mapped classes to General Habitat Categories (GHCs) from which Annex I habitats (EU Habitats Directive) can be defined. The EODHaM system uses a combination of pixel and object-based procedures. The 1st and 2nd stages use earth observation (EO) data alone with expert knowledge to generate classes according to the LCCS taxonomy (Levels 1 to 3 and beyond). The 3rd stage translates the final LCCS classes into GHCs from which Annex I habitat type maps are derived. An additional module quantifies changes in the LCCS classes and their components, indices derived from earth observation, object sizes and dimensions and the translated habitat maps (i.e., GHCs or Annex I). Examples are provided of the application of EODHaM system elements to protected sites and their surrounds in Italy, Wales (UK), the Netherlands, Greece, Portugal and India. [ABSTRACT FROM AUTHOR]

Habitat mapping is a core element in numerous tasks related to sustainability management, conservation planning and biodiversity monitoring. Land cover classifications, extracted in a timely and area-extensive manner through remote sensing data, can be employed to derive habitat maps, through the use of domain expert knowledge and ancillary information. However, complete information to fully discriminate habitat classes is rarely available, while expert knowledge may suffer from uncertainty and inaccuracies. In this study, a rule-based classification methodology for habitat mapping through the use of a pre-existing land cover map and remote sensing data is proposed to deal with uncertainty, missing information, noise afflicted data and inaccurate rule thresholds. The use of the Dempster–Shafer theory of evidence is introduced in land cover to habitat mapping, in combination with fuzzy logic. The framework is able to handle lack of information, by considering composite classes, when necessary data for the discrimination of the constituting single classes is missing, and deal with uncertainty expressed in domain expert knowledge. In addition, a number of fuzzification schemes are proposed to be incorporated in the methodology in order to increase its performance and robustness towards noise afflicted data or inaccurate rule thresholds. Comparison with reference data reveals the improved performance of the methodology and the efficient handling of uncertainty in expert rules. The further scope is to provide a robust methodology readily transferable and applicable to similar sites in different geographic regions and environments. Although developed for habitat mapping, the proposed rule-based methodology is flexible and generic and may be well extended and applied in various classification tasks, aiming at handling uncertainty, missing information and inaccuracies in data or expert rules. [ABSTRACT FROM AUTHOR]

Abstract: Monitoring protected areas and their surrounds at local to regional scales is essential given their vulnerability to anthropogenic pressures, including those associated with climatic fluctuation, and important for management and fulfilment of national and international directives and agreements. Whilst monitoring has commonly revolved around field data, remote sensing can play a key role in establishing baselines of the extent and condition of habitats and associated species diversity as well as quantifying losses, degradation or recovery associated with specific events or processes. Landsat images constitute a major data source for habitat monitoring, capturing broad scale information on changes in habitat extent and spatial patterns of fragmentation that allow disturbances in protected areas to be identified. These data are, however, less able to provide information on changes in habitat quality, species distribution and fine-scale disturbances, and hence data from other spaceborne optical sensors are increasingly being considered. Very High Resolution (VHR) optical datasets have been exploited to a lesser extent, partly because of the relative recency of spaceborne observations and challenges associated with obtaining and routinely extracting information from airborne multi-spectral and hyperspectral datasets. The lack of a shortwave infrared band in many VHR datasets and provision of too much detail (e.g., shadows within and from landscape objects) also present challenges in some cases. Light Detection and Ranging (LiDAR) and Synthetic Aperture Radar (SAR) data, particularly when used synergistically with optical data, have benefited the detection of changes in the three-dimensional structure of habitats. This review shows that remote sensing has a strong, yet underexploited potential to assist in the monitoring of protected areas. However, the data generated need to be utilized more effectively to enable better management of the condition of protected areas and their surrounds, prepare for climate change, and assist planning for future landscape management. [Copyright &y& Elsevier]

The present study focuses on the use of Convolutional Neural Networks (CNN or ConvNet) to classify a multi-seasonal dataset of Sentinel-2 images to discriminate four grassland habitats in the "Murgia Alta" protected site. To this end, we compared two approaches differing only by the first layer machinery, which, in one case, is instantiated as a fully-connected layer and, in the other case, results in a ConvNet equipped with kernels covering the whole input (wide-kernel ConvNet). A patchwise approach, tessellating training reference data in square patches, was adopted. Besides assessing the effectiveness of ConvNets with patched multispectral data, we analyzed how the information needed for classification spreads to patterns over convex sets of pixels. Our results show that: (a) with an F1-score of around 97% (5 × 5 patch size), ConvNets provides an excellent tool for patch-based pattern recognition with multispectral input data without requiring special feature extraction; (b) the information spreads over the limit of a single pixel: the performance of the network increases until 5 × 5 patch sizes are used and then ConvNet performance starts decreasing. [ABSTRACT FROM AUTHOR]