23 results on '"Deaville, Rob"'
Search Results
2. Once more unto the beach.
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Deaville, Rob and Brown, Julia
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BEACHING of whales , *FINBACK whale , *WHALES , *STRANDING of aquatic animals , *WOUNDS & injuries - Abstract
The article details the investigation conducted by Rob Deaville of the Cetacean Strandings Investigation Programme (CSIP) of a dead fin whale washed up on the shore of of Red Rock Beach in Devon, England in September 2016. Topics discussed include the starvation of the whale, Deaville's discovery of cuts and abrasions along the whale's tail, and the conclusion that the injuries limited the whale's movement and prevented it from diving and feeding properly.
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- 2016
3. PCB pollution continues to impact populations of orcas and other dolphins in European waters.
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Jepson, Paul D., Deaville, Rob, Barber, Jonathan L., Aguilar, Àlex, Borrell, Asunción, Murphy, Sinéad, Barry, Jon, Brownlow, Andrew, Barnett, James, Berrow, Simon, Cunningham, Andrew A., Davison, Nicholas J., ten Doeschate, Mariel, Esteban, Ruth, Ferreira, Marisa, Foote, Andrew D., Genov, Tilen, Giménez, Joan, Loveridge, Jan, and Llavona, Ángela
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- 2016
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4. Beached bachelors: An extensive study on the largest recorded sperm whale Physeter macrocephalus mortality event in the North Sea.
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IJsseldijk, Lonneke L., van Neer, Abbo, Deaville, Rob, Begeman, Lineke, van de Bildt, Marco, van den Brand, Judith M. A., Brownlow, Andrew, Czeck, Richard, Dabin, Willy, ten Doeschate, Mariel, Herder, Vanessa, Herr, Helena, IJzer, Jooske, Jauniaux, Thierry, Jensen, Lasse Fast, Jepson, Paul D., Jo, Wendy Karen, Lakemeyer, Jan, Lehnert, Kristina, and Leopold, Mardik F.
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SPERM whale , *PATHOLOGY , *ANTHROPOGENIC effects on nature , *FISH habitats - Abstract
Between the 8th January and the 25th February 2016, the largest sperm whale Physeter macrocephalus mortality event ever recorded in the North Sea occurred with 30 sperm whales stranding in five countries within six weeks. All sperm whales were immature males. Groups were stratified by size, with the smaller animals stranding in the Netherlands, and the largest in England. The majority (n = 27) of the stranded animals were necropsied and/or sampled, allowing for an international and comprehensive investigation into this mortality event. The animals were in fair to good nutritional condition and, aside from the pathologies caused by stranding, did not exhibit significant evidence of disease or trauma. Infectious agents were found, including various parasite species, several bacterial and fungal pathogens and a novel alphaherpesvirus. In nine of the sperm whales a variety of marine litter was found. However, none of these findings were considered to have been the primary cause of the stranding event. Potential anthropogenic and environmental factors that may have caused the sperm whales to enter the North Sea were assessed. Once sperm whales enter the North Sea and head south, the water becomes progressively shallower (<40 m), making this region a global hotspot for sperm whale strandings. We conclude that the reasons for sperm whales to enter the southern North Sea are the result of complex interactions of extrinsic environmental factors. As such, these large mortality events seldom have a single ultimate cause and it is only through multidisciplinary, collaborative approaches that potentially multifactorial large-scale stranding events can be effectively investigated. [ABSTRACT FROM AUTHOR]
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- 2018
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5. Putative origin and maternal relatedness of male sperm whales (Physeter macrocephalus) recently stranded in the North Sea.
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Autenrieth, Marijke, Ernst, Anja, Deaville, Rob, Demaret, Fabien, IJsseldijk, Lonneke L., Siebert, Ursula, and Tiedemann, Ralph
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SPERM whale , *SINGLE nucleotide polymorphisms , *POPULATION differentiation , *GERMPLASM - Abstract
The globally distributed sperm whale (Physeter macrocephalus) has a partly matrilineal social structure with predominant male dispersal. At the beginning of 2016, a total of 30 male sperm whales stranded in five different countries bordering the southern North Sea. It has been postulated that these individuals were on a migration route from the north to warmer temperate and tropical waters where females live in social groups. By including samples from four countries (n = 27), this event provided a unique chance to genetically investigate the maternal relatedness and the putative origin of these temporally and spatially co-occuring male sperm whales. To utilize existing genetic resources, we sequenced 422 bp of the mitochondrial control region, a molecular marker for which sperm whale data are readily available from the entire distribution range. Based on four single nucleotide polymorphisms (SNPs) within the mitochondrial control region, five matrilines could be distinguished within the stranded specimens, four of which matched published haplotypes previously described in the Atlantic. Among these male sperm whales, multiple matrilineal lineages co-occur. We analyzed the population differentiation and could show that the genetic diversity of these male sperm whales is comparable to the genetic diversity in sperm whales from the entire Atlantic Ocean. We confirm that within this stranding event, males do not comprise maternally related individuals and apparently include assemblages of individuals from different geographic regions. [ABSTRACT FROM AUTHOR]
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- 2018
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6. Putative origin and maternal relatedness of male sperm whales (Physeter macrocephalus) recently stranded in the North Sea.
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Autenrieth, Marijke, Ernst, Anja, Deaville, Rob, Demaret, Fabien, IJsseldijk, Lonneke L., Siebert, Ursula, and Tiedemann, Ralph
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SPERM whale , *SPECIES distribution , *DISPERSAL (Ecology) , *ANIMAL populations , *MARINE mammals - Abstract
The globally distributed sperm whale ( Physeter macrocephalus ) has a partly matrilineal social structure with predominant male dispersal. At the beginning of 2016, a total of 30 male sperm whales stranded in five different countries bordering the southern North Sea. It has been postulated that these individuals were on a migration route from the north to warmer temperate and tropical waters where females live in social groups. By including samples from four countries (n = 27), this event provided a unique chance to genetically investigate the maternal relatedness and the putative origin of these temporally and spatially co-occuring male sperm whales. To utilize existing genetic resources, we sequenced 422 bp of the mitochondrial control region, a molecular marker for which sperm whale data are readily available from the entire distribution range. Based on four single nucleotide polymorphisms (SNPs) within the mitochondrial control region, five matrilines could be distinguished within the stranded specimens, four of which matched published haplotypes previously described in the Atlantic. Among these male sperm whales, multiple matrilineal lineages co-occur. We analyzed the population differentiation and could show that the genetic diversity of these male sperm whales is comparable to the genetic diversity in sperm whales from the entire Atlantic Ocean. We confirm that within this stranding event, males do not comprise maternally related individuals and apparently include assemblages of individuals from different geographic regions. [ABSTRACT FROM AUTHOR]
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- 2018
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7. Cetacean Intracytoplasmic Eosinophilic Globules: A Cytomorphological, Histological, Histochemical, Immunohistochemical, and Proteomic Characterization.
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Fernández, Antonio, Câmara, Nakita, Sierra, Eva, Arbelo, Manuel, Bernaldo de Quirós, Yara, Jepson, Paul D., Deaville, Rob, Díaz-Delgado, Josué, Suárez-Santana, Cristian, Castro, Ayoze, Hernández, Julia N., and Godinho, Ana
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MASS spectrometry , *ACUTE phase proteins , *CETACEA , *TIME-of-flight mass spectrometry , *PROTEOMICS , *LECTINS - Abstract
Simple Summary: The presence of round to oval, single to multiple, hyaline eosinophilic globules inside the cytoplasmic of the hepatocytes of cetaceans are unknown. Therefore, this article aims to describe their occurrence and characterize their features using different laboratorial techniques. A total of 95 out of 115 cetaceans (83%) from 16 different species exhibited intracytoplasmic eosinophilic globules (IEGs) within the hepatocytes. These globules were positive for fibrinogen (FB, 97%), albumin (Alb, 85%), and α1-antitrypsine (A1AT, 53%), with the positivity for FB and A1AT correlated with live-stranding, hepatic congestion and a good nutritional status. The IEGs in 36 cetaceans that died due to bycatch were, all except one, FB-positive and A1AT-negative. The IEGs exhibited morphologic and compositional variations at the ultrastructural level, suggesting various stages of development. The proteomic analyses confirmed an association between the IEGs and acute phase proteins, suggesting a relationship between acute stress (i.e., bycatch), disease, and cellular protective mechanisms. The nature, etiopathogenesis, and clinicopathologic relevance of the prevalent intracytoplasmic eosinophilic globules (IEGs) within hepatocytes of cetaceans are unknown. This study aims to evaluate the presence and characterize the IEGs in the hepatocytes of cetaceans using histochemical and immunohistochemical electron microscopy, Western blot, lectin histochemistry, and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry techniques. A total of 95/115 (83%) animals (16 species) exhibited histologically evident intracytoplasmic round to oval, single to multiple, hyaline eosinophilic globules within the hepatocytes. These globules were largely PAS-positive, diastase resistant, and were immunopositive for fibrinogen (FB, 97%), albumin (Alb, 85%), and α1-antitrypsine (A1AT, 53%). The IEG positivity for FB and A1AT were correlated with live-stranding, hepatic congestion and a good nutritional status. The cetaceans lacking IEGs were consistently dead stranded and had poor body conditions. The IEGs in 36 bycaught cetaceans were, all except one, FB-positive and A1AT-negative. The IEGs exhibited morphologic and compositional variations at the ultrastructural level, suggesting various stages of development and/or etiopathogenesis(es). The glycocalyx analysis suggested an FB- and A1AT-glycosylation pattern variability between cetaceans and other animals. The proteomic analyses confirmed an association between the IEGs and acute phase proteins, suggesting a relationship between acute stress (i.e., bycatch), disease, and cellular protective mechanisms, allowing pathologists to correlate this morphological change using the acute hepatocytic cell response under certain stress conditions. [ABSTRACT FROM AUTHOR]
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- 2023
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8. Postglacial Colonization of Northern Coastal Habitat by Bottlenose Dolphins: A Marine Leading-Edge Expansion?
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Nykänen, Milaja, Kaschner, Kristin, Dabin, Willy, Brownlow, Andrew, Davison, Nicholas J, Deaville, Rob, Garilao, Cristina, Kesner-Reyes, Kathleen, Gilbert, M Thomas P, Penrose, Rod, Islas-Villanueva, Valentina, Wales, Nathan, Ingram, Simon N, Rogan, Emer, Louis, Marie, and Foote, Andrew D
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BOTTLENOSE dolphin , *LAST Glacial Maximum , *MARINE habitats , *EARTH temperature , *FREE earth oscillations , *HABITATS , *COLONIZATION - Abstract
Oscillations in the Earth's temperature and the subsequent retreating and advancing of ice-sheets around the polar regions are thought to have played an important role in shaping the distribution and genetic structuring of contemporary high-latitude populations. After the Last Glacial Maximum (LGM), retreating of the ice-sheets would have enabled early colonizers to rapidly occupy suitable niches to the exclusion of other conspecifics, thereby reducing genetic diversity at the leading-edge. Bottlenose dolphins (genus Tursiops) form distinct coastal and pelagic ecotypes, with finer-scale genetic structuring observed within each ecotype. We reconstruct the postglacial colonization of the Northeast Atlantic (NEA) by bottlenose dolphins using habitat modeling and phylogenetics. The AquaMaps model hindcasted suitable habitat for the LGM in the Atlantic lower latitude waters and parts of the Mediterranean Sea. The time-calibrated phylogeny, constructed with 86 complete mitochondrial genomes including 30 generated for this study and created using a multispecies coalescent model, suggests that the expansion to the available coastal habitat in the NEA happened via founder events starting ~15 000 years ago (95% highest posterior density interval: 4 900–26 400). The founders of the 2 distinct coastal NEA populations comprised as few as 2 maternal lineages that originated from the pelagic population. The low effective population size and genetic diversity estimated for the shared ancestral coastal population subsequent to divergence from the pelagic source population are consistent with leading-edge expansion. These findings highlight the legacy of the Late Pleistocene glacial cycles on the genetic structuring and diversity of contemporary populations. [ABSTRACT FROM AUTHOR]
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- 2019
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9. Fatal Asphyxiation in Two Long-Finned Pilot Whales (Globicephala melas) Caused by Common Soles (Solea solea).
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IJsseldijk, Lonneke L., Leopold, Mardik F., Bravo Rebolledo, Elisa L., Deaville, Rob, Haelters, Jan, IJzer, Jooske, Jepson, Paul D., and Gröne, Andrea
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GLOBICEPHALA , *ASPHYXIA , *SOLEA solea , *AUTOPSY , *RESPIRATORY obstructions - Abstract
Long-finned pilot whales (Globicephala melas) are rare visitors to the southern North Sea, but recently two individual strandings occurred on the Dutch coast. Both animals shared the same, unusual cause of death: asphyxiation from a common sole (Solea solea) stuck in their nasal cavity. This is a rare cause of death in cetaceans. Whilst asphyxiation has been reported in smaller odontocetes, there are no recent records of this occurring in Globicephala species. Here we report the stranding, necropsy and diet study results as well as discuss the unusual nature of this phenomenon. Flatfish are not a primary prey species for pilot whales and are rarely eaten by other cetaceans, such as harbour porpoises (Phocoena phocoena), in which there are several reports of asphyxiation due to airway obstruction by soles. This risk may be due to the fish’s flexible bodies which can enter small cavities either actively in an attempt to escape or passively due to the whale ‘coughing’ or ‘sneezing’ to rid itself of the blockage of the trachea. It is also possible that the fish enter the airways whilst the whale is re-articulating the larynx after trying to ingest large, oddly shaped prey. It is unlikely that the soles entered the airways after the death of the whales and we believe therefore that they are responsible for the death of these animals. [ABSTRACT FROM AUTHOR]
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- 2015
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10. Identification of Novel Cetacean Poxviruses in Cetaceans Stranded in South West England.
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Barnett, James, Dastjerdi, Akbar, Davison, Nick, Deaville, Rob, Everest, David, Peake, Julie, Finnegan, Christopher, Jepson, Paul, and Steinbach, Falko
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CETACEA , *POXVIRUSES , *ANIMAL health , *ELECTRON microscopy , *DISEASES - Abstract
Poxvirus infections in marine mammals have been mainly reported through their clinical lesions and electron microscopy (EM). Poxvirus particles in association with such lesions have been demonstrated by EM and were previously classified as two new viruses, cetacean poxvirus 1 (CePV-1) and cetacean poxvirus 2 (CePV-2). In this study, epidermal pox lesions in cetaceans stranded in South West England (Cornwall) between 2008 and 2012 were investigated by electron microscopy and molecular analysis. PCR and sequencing of a highly conserved region within the viral DNA polymerase gene ruled out both parapox- and orthopoxviruses. Moreover, phylogenetic analysis of the PCR product clustered the sequences with those previously described as cetacean poxviruses. However, taking the close genetic distance of this gene fragment across the family of poxviridae into account, it is reasonable to postulate further, novel cetacean poxvirus species. The nucleotide similarity within each cluster (tentative species) detected ranged from 98.6% to 100%, whilst the similarity between the clusters was no more than 95%. The detection of several species of poxvirus in different cetacean species confirms the likelihood of a heterogeneous cetacean poxvirus genus, comparable to the heterogeneity observed in other poxvirus genera. [ABSTRACT FROM AUTHOR]
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- 2015
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11. Cetacean range and climate in the eastern North Atlantic: future predictions and implications for conservation.
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Lambert, Emily, Pierce, Graham J., Hall, Karen, Brereton, Tom, Dunn, Timothy E., Wall, Dave, Jepson, Paul D., Deaville, Rob, and MacLeod, Colin D.
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ENVIRONMENTAL sciences , *HABITATS , *CONSERVATION biology , *CLIMATE change - Abstract
There is increasing evidence that the distributions of a large number of species are shifting with global climate change as they track changing surface temperatures that define their thermal niche. Modelling efforts to predict species distributions under future climates have increased with concern about the overall impact of these distribution shifts on species ecology, and especially where barriers to dispersal exist. Here we apply a bio-climatic envelope modelling technique to investigate the impacts of climate change on the geographic range of ten cetacean species in the eastern North Atlantic and to assess how such modelling can be used to inform conservation and management. The modelling process integrates elements of a species' habitat and thermal niche, and employs 'hindcasting' of historical distribution changes in order to verify the accuracy of the modelled relationship between temperature and species range. If this ability is not verified, there is a risk that inappropriate or inaccurate models will be used to make future predictions of species distributions. Of the ten species investigated, we found that while the models for nine could successfully explain current spatial distribution, only four had a good ability to predict distribution changes over time in response to changes in water temperature. Applied to future climate scenarios, the four species-specific models with good predictive abilities indicated range expansion in one species and range contraction in three others, including the potential loss of up to 80% of suitable white-beaked dolphin habitat. Model predictions allow identification of affected areas and the likely time-scales over which impacts will occur. Thus, this work provides important information on both our ability to predict how individual species will respond to future climate change and the applicability of predictive distribution models as a tool to help construct viable conservation and management strategies. [ABSTRACT FROM AUTHOR]
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- 2014
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12. Habitat-driven population structure of bottlenose dolphins, Tursiops truncatus, in the North- East Atlantic.
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Louis, Marie, Viricel, Amélia, Lucas, Tamara, Peltier, Hélène, Alfonsi, Eric, Berrow, Simon, Brownlow, Andrew, Covelo, Pablo, Dabin, Willy, Deaville, Rob, Stephanis, Renaud, Gally, François, Gauffier, Pauline, Penrose, Rod, Silva, Monica A., Guinet, Christophe, and Simon‐Bouhet, Benoit
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HABITATS , *BOTTLENOSE dolphin , *ANIMAL population genetics , *MICROSATELLITE repeats , *MITOCHONDRIAL membranes - Abstract
Despite no obvious barrier to gene flow, historical environmental processes and ecological specializations can lead to genetic differentiation in highly mobile animals. Ecotypes emerged in several large mammal species as a result of niche specializations and/or social organization. In the North- West Atlantic, two distinct bottlenose dolphin ( Tursiops truncatus) ecotypes (i.e. 'coastal' and 'pelagic') have been identified. Here, we investigated the genetic population structure of North- East Atlantic ( NEA) bottlenose dolphins on a large scale through the analysis of 381 biopsy-sampled or stranded animals using 25 microsatellites and a 682-bp portion of the mitochondrial control region. We shed light on the likely origin of stranded animals using a carcass drift prediction model. We showed, for the first time, that coastal and pelagic bottlenose dolphins were highly differentiated in the NEA. Finer-scale population structure was found within the two groups. We suggest that distinct founding events followed by parallel adaptation may have occurred independently from a large Atlantic pelagic population in the two sides of the basin. Divergence could be maintained by philopatry possibly as a result of foraging specializations and social organization. As coastal environments are under increasing anthropogenic pressures, small and isolated populations might be at risk and require appropriate conservation policies to preserve their habitats. While genetics can be a powerful first step to delineate ecotypes in protected and difficult to access taxa, ecotype distinction should be further documented through diet studies and the examination of cranial skull features associated with feeding. [ABSTRACT FROM AUTHOR]
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- 2014
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13. Alternative flame retardants, Dechlorane Plus and BDEs in the blubber of harbour porpoises (Phocoena phocoena) stranded or bycaught in the UK during 2008.
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Law, Robin J., Losada, Sara, Barber, Jonathan L., Bersuder, Philippe, Deaville, Rob, Brownlow, Andrew, Penrose, Rod, and Jepson, Paul D.
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FIREPROOFING agents , *BLUBBER , *HARBOR porpoise , *PHENYL ethers , *MIREX , *BROMINATION - Abstract
Abstract: Thirty alternative flame retardant compounds and a suite of 17 brominated diphenyl ether (BDE) congeners were determined in the blubber of 21 harbour porpoises stranded or bycaught around UK coasts during 2008 using GC-MS/MS. Of the 30 compounds, 19 were not detected. Of the remaining 11 compounds, some fell below the lowest calibration level and so were recorded as less than values, but were certainly present in the blubber samples (examples include tetrabromo-p-xylene (TBX), tetrabromo-o-chlorotoluene (TBCT) and 2,3-dibromopropyl-2,4,6-tribromophenyl ether (TBP-DBPE). Concentrations were low, the highest concentration being only 35μgkg−1 wet weight. This contrasted with those of the BDEs, summed concentrations which ranged from 54.6 to 913μgkg−1 wet weight, although levels in porpoise blubber have been declining since 1998. Both Dechlorane Plus (DDC-CO) isomers were detected in some samples, suggesting either that this product has been used in the UK or that its presence may result from atmospheric transport from source regions. BDE183, a marker for the octa-mix PBDE product, was found at low concentrations (0.63 to 1.7μgkg−1 wet weight) and the four nona- and deca-BDE congeners were not detected in any sample. [Copyright &y& Elsevier]
- Published
- 2013
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14. Molecular Characterization of Poxviruses Associated with Tattoo Skin Lesions in UK Cetaceans.
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Blacklaws, Barbara A., Gajda, Anna M., Tippelt, Sabine, Jepson, Paul D., Deaville, Rob, Van Bressem, Marie-Francoise, and Pearce, Gareth P.
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MOLECULAR biology , *POXVIRUSES , *CETACEA , *SKIN diseases , *DNA , *MARINE biology , *MICROBIOLOGY , *VETERINARY virology - Abstract
There is increasing concern for the well-being of cetacean populations around the UK. Tattoo skin disease (characterised by irregular, grey, black or yellowish, stippled cutaneous lesions) caused by poxvirus infection is a potential health indicatora potential health indicator for cetaceans. Limited sequence data indicates that cetacean poxviruses (CPVs) belong to an unassigned genus of the Chordopoxvirinae. To obtain further insight into the phylogenetic relationships between CPV and other Chordopoxvirinae members we partially characterized viral DNA originating from tattoo lesions collected in Delphinidae and Phocoenidae stranded along the UK coastline in 1998–2008. We also evaluated the presence of CPV in skin lesions other than tattoos to examine specificity and sensitivity of visual diagnosis. After DNA extraction, regions of the DNA polymerase and DNA topoisomerase I genes were amplified by PCR, sequenced and compared with other isolates. The presence of CPV DNA was demonstrated in tattoos from one striped dolphin (Stenella coeruleoalba), eight harbour porpoises (Phocoena phocoena) and one short-beaked common dolphin (Delphinus delphis) and in one ‘dubious tattoo’ lesion detected in one other porpoise. Seventeen of the 18 PCR positive skin lesions had been visually identified as tattoos and one as a dubious tattoo. None of the other skin lesions were PCR positive. Thus, visual identification had a 94.4% sensitivity and 100% specificity. The DNA polymerase PCR was most effective in detecting CPV DNA. Limited sequence phylogeny grouped the UK samples within the odontocete poxviruses (CPV group 1) and indicated that two different poxvirus lineages infect the Phocoenidae and the Delphinidae. The phylogenetic tree had three major branches: one with the UK Phocoenidae viruses, one with the Delphinidae isolates and one for the mysticete poxvirus (CPV group 2). This implies a radiation of poxviruses according to the host suborder and the families within these suborders. [ABSTRACT FROM AUTHOR]
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- 2013
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15. The Stranding Anomaly as Population Indicator: The Case of Harbour Porpoise Phocoena phocoena in North-Western Europe.
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Peltier, Helene, Baagøe, Hans J., Camphuysen, Kees C. J., Czeck, Richard, Dabin, Willy, Daniel, Pierre, Deaville, Rob, Haelters, Jan, Jauniaux, Thierry, Jensen, Lasse F., Jepson, Paul D., Keijl, Guido O., Siebert, Ursula, Van Canneyt, Olivier, and Ridoux, Vincent
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HARBOR porpoise , *BIOINDICATORS , *ENVIRONMENTAL monitoring , *COST effectiveness , *CETACEAN populations , *BIOGEOGRAPHY , *MARINE resources conservation , *MARINE biology - Abstract
Ecological indicators for monitoring strategies are expected to combine three major characteristics: ecological significance, statistical credibility, and cost-effectiveness. Strategies based on stranding networks rank highly in cost-effectiveness, but their ecological significance and statistical credibility are disputed. Our present goal is to improve the value of stranding data as population indicator as part of monitoring strategies by constructing the spatial and temporal null hypothesis for strandings. The null hypothesis is defined as: small cetacean distribution and mortality are uniform in space and constant in time. We used a drift model to map stranding probabilities and predict stranding patterns of cetacean carcasses under H0 across the North Sea, the Channel and the Bay of Biscay, for the period 1990–2009. As the most common cetacean occurring in this area, we chose the harbour porpoise Phocoena phocoena for our modelling. The difference between these strandings expected under H0 and observed strandings is defined as the stranding anomaly. It constituted the stranding data series corrected for drift conditions. Seasonal decomposition of stranding anomaly suggested that drift conditions did not explain observed seasonal variations of porpoise strandings. Long-term stranding anomalies increased first in the southern North Sea, the Channel and Bay of Biscay coasts, and finally the eastern North Sea. The hypothesis of changes in porpoise distribution was consistent with local visual surveys, mostly SCANS surveys (1994 and 2005). This new indicator could be applied to cetacean populations across the world and more widely to marine megafauna. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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16. Aspergillosis in the middle ear of a harbour porpoise ( Phocoena phocoena): a case report.
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Prahl, Susanne, Jepson, Paul D., Sanchez-Hanke, Marcos, Deaville, Rob, and Siebert, Ursula
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LETTERS to the editor , *PULMONARY aspergillosis , *HARBOR porpoise - Abstract
Hearing is one of the major senses in whales and dolphins (cetaceans). This is the first report of severe mycotic otitis media in a cetacean, a juvenile female harbour porpoise ( Phocoena phocoena) from British waters that stranded alive. Gross examinations were followed by histological and microbiological investigations of the auditory apparatus. Both tympanic cavities and periotic sinuses displayed copious greenish-yellow purulent and caseous material . Severe fungal infestation by Aspergillus terreus was documented in the otic region but not in any other site of the body. Adjacent to the promontorium, massive accumulation of fibrinous secretion and infiltration of clusters of inflammatory cells were present. Newly formed cysts and vessels replaced the round window membrane location, reminiscent of granulation tissue. Inflammatory cells and a severe fibrin net were noted within the perilymphatic spaces of scala tympani and scala vestibuli, indicative of an acute fibrinous otitis. Inflammatory reactions have probably been caused by this fungal organism. The basilar membrane was solely covered by a simple cuboidal epithelium. Complete absence of sensory cells of the Organ of Corti characterised a further severe phenomenon, which possibly led to the animal's poor nutritional status and stranding. Potential portals of entry are being discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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17. Modular organizations of novel cetacean papillomaviruses
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Gottschling, Marc, Bravo, Ignacio G., Schulz, Eric, Bracho, Maria A., Deaville, Rob, Jepson, Paul D., Bressem, Marie-Françoise Van, Stockfleth, Eggert, and Nindl, Ingo
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CETACEA , *PAPILLOMAVIRUSES , *PHYLOGENY , *VIROLOGY , *SEXUALLY transmitted diseases , *GENITAL warts - Abstract
Abstract: The phylogenetic position of cetacean papillomaviruses (PVs: Omikron-PVs and Upsilon-PVs) varies depending on the region of the genome analysed. They cluster together with Alpha-PVs when analysing early genes and with Xi-PVs and Phi-PVs when analysing late genes. We cloned and sequenced the complete genomes of five novel PVs, sampled from genital and oesophageal lesions of free-ranging cetaceans: Delphinus delphis (DdPV1), Lagenorhynchus acutus (TtPV3 variant), and Phocoena phocoena (PphPV1, PphPV2, and PphPV3). Using Maximum Likelihood and Bayesian approaches, all cetacean PVs constituted a monophyletic group with Alpha-, Omega-, and Dyodelta-PVs as inferred from E1–E2 early genes analyses, thus matching the shared phenotype of mucosal tropism. However, cetacean PVs, with the exception of PphPV3, were the closest relatives of Xi-PVs and Phi-PVs in L2–L1 late genes analyses, isolated from cow and goat, thus reflecting the close relationship between Cetacea and Artiodactyla. Our results are compatible with a recombination between ancestral PVs infecting the Cetartiodactyla lineage. Our study supports a complex evolutionary scenario with multiple driving forces for PV diversification, possibly including recombination and also interspecies transmission. [Copyright &y& Elsevier]
- Published
- 2011
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18. Levels and Trends of Brominated Diphenyl Ethers in Blubber of Harbor Porpoises (Phocoena phocoena) from the U.K., 1992-2008.
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LAW, ROBIN J., BARRY, JON, BERSUDER, PHILIPPE, BARBER, JONATHAN L., DEAVILLE, ROB, REID, ROBERT J., and JEPSON, PAUL D.
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POLYBROMINATED diphenyl ethers , *TREND analysis , *PHYSIOLOGICAL effects of chemicals , *HARBOR porpoise , *EFFECT of water pollution on marine organisms , *TISSUE analysis , *BLUBBER , *CHEMICAL laws - Abstract
Controls were placed on the production and use of the pentamix polybrominated diphenyl ether (PBDE) formulation within the European Union in 2004. In porpoises stranded or bycaught around the U.K., BDE congeners from this product predominate. Lipid-normalized concentrations of 9 (summed) BDE congeners in the blubber of 415 porpoises sampled during the period 1992-2008 have been investigated for possible time trends resulting from the regulatory action. Our analysis suggests that overall, median Σ9BDE concentrations peaked around 1998 and have since reduced by between 53.8% and 73.5% to 2008. Our best point estimate is that the reduction has been 67.6%. This decline was highly statistically significant (p < 0.001) and was not confounded by a range of other factors which were also considered (area, season, nutritional status, bycaught/stranded, and age class). [ABSTRACT FROM AUTHOR]
- Published
- 2010
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19. A note on the unprecedented strandings of 56 deep-diving whales along the UK and Irish coast.
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DOLMAN, SARAH J., PINN, EUNICE, REID, ROBERT J., BARLEY, JASON P., DEAVILLE, ROB, JEPSON, PAUL D., O'CONNELL, MICK, BERROW, SIMON, PENROSE, ROD S., STEVICK, PETER T., CALDERAN, SUSANNAH, ROBINSON, KEVIN P., BROWNELL JR, ROBERT L., and SIMMONDS, MARK P.
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ZIPHIUS cavirostris , *GLOBICEPHALA melaena , *MARINE animals , *CETACEA - Abstract
In the first seven months of 2008, eighteen Cuvier's beaked whales (Ziphius cavirostris), four Sowerby's beaked whales (Mesoplodon bidens), five unidentified beaked whales and twenty-nine long-finned pilot whales (Globicephala melas) were reported stranded in the UK and Ireland. Decomposition of those animals investigated puts the predicted time of death at mid-January. Concerns that an unusual mortality event had taken place prompted further investigations. Most carcasses were too decomposed for necropsy. A summary of findings is presented here. Although the initial stranding of five Cuvier's beaked whales in Scotland shared some similarities with atypical mass stranding events linked in time and space to mid-frequency naval sonars, there were two important differences with the remaining strandings during this period. First, the geographical range of the event was very wide and second, the strandings occurred over a prolonged period of several months. Both of these factors could be related to the fact that the mortalities occurred offshore and the carcasses drifted ashore. The cause(s) of this high number of strandings of mixed offshore cetacean species during this period remain undetermined. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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20. Spatiotemporal mortality and demographic trends in a small cetacean: Strandings to inform conservation management.
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IJsseldijk, Lonneke L., ten Doeschate, Mariel T.I., Brownlow, Andrew, Davison, Nicholas J., Deaville, Rob, Galatius, Anders, Gilles, Anita, Haelters, Jan, Jepson, Paul D., Keijl, Guido O., Kinze, Carl Chr., Olsen, Morten Tange, Siebert, Ursula, Thøstesen, Charlotte Bie, van den Broek, Jan, Gröne, Andrea, and Heesterbeek, Hans
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ANIMAL mortality , *MARINE ecosystem health , *CETACEA , *HARBOR porpoise , *ANIMAL populations , *MORTALITY - Abstract
With global increases in anthropogenic pressures on wildlife populations comes a responsibility to manage them effectively. The assessment of marine ecosystem health is challenging and often relies on monitoring indicator species, such as cetaceans. Most cetaceans are however highly mobile and spend the majority of their time hidden from direct view, resulting in uncertainty on even the most basic population metrics. Here, we discuss the value of long-term and internationally combined stranding records as a valuable source of information on the demographic and mortality trends of the harbour porpoise (Phocoena phocoena) in the North Sea. We analysed stranding records (n = 16,181) from 1990 to 2017 and demonstrate a strong heterogeneous seasonal pattern of strandings throughout the North Sea, indicative of season-specific distribution or habitat use, and season-specific mortality. The annual incidence of strandings has increased since 1990, with a notable steeper rise particularly in the southern North Sea since 2005. A high density of neonatal strandings occurred specifically in the eastern North Sea, indicative of areas important for calving, and large numbers of juvenile males stranded in the southern parts, indicative of a population sink or reflecting higher male dispersion. These findings highlight the power of stranding records to detect potentially vulnerable population groups in time and space. This knowledge is vital for managers and can guide, for example, conservation measures such as the establishment of time-area-specific limits to potentially harmful human activities, aiming to reduce the number and intensity of human-wildlife conflicts. • International data synthesis to understand wildlife mortality and demographic trends • We demonstrate the value of long-term surveillance exemplified by stranding records. • Our analyses indicate potential vulnerable population groups in time and space. • Analytical methods allow establishment of robust baseline of spatiotemporal variation. • Results guide conservation measures aiming to reduce human-wildlife conflicts at sea. [ABSTRACT FROM AUTHOR]
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- 2020
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21. Juvenile harbor porpoises in the UK are exposed to a more neurotoxic mixture of polychlorinated biphenyls than adults.
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Williams, Rosie S., Curnick, David J., Barber, Jonathan L., Brownlow, Andrew, Davison, Nicholas J., Deaville, Rob, Perkins, Matthew, Jobling, Susan, and Jepson, Paul D.
- Abstract
• 347 harbor porpoise PCB congener profiles were analysed. • Juveniles had higher proportions of less chlorinated congeners than adults. • Porpoises on the West coast of England and Wales had higher ratios of persistent PCBs. • To assess risk the toxicity of different congener profiles at different life stages needs to be quantified. Polychlorinated biphenyls (PCBs) are a group of 209 persistent and bio-accumulative toxic pollutants present as complex mixtures in human and animal tissues. Harbor porpoises accumulate some of the highest levels of PCBs because they are long-lived mammals that feed at a high trophic level. Studies typically use the sum of a suite of individual chlorobiphenyl congeners (CBs) to investigate PCBs in wildlife. However, toxic effects and thresholds of CB congeners differ, therefore population health risks of exposure may be under or over-estimated dependent on the congener profiles present. In this study, we found congener profiles varied with age, sex and location, particularly between adult females and juveniles. We found that adult females had the highest proportions of octa -chlorinated congeners whilst juveniles had the highest proportions of tri- and tetra- chlorinated congeners. This is likely to be a consequence of pollutant offloading between mothers and calves during lactation. Analysis of the individual congener toxicities found that juveniles were exposed to a more neurotoxic CB mixture at a time when they were most vulnerable to its effects. These findings are an important contribution towards our understanding of variation in congener profiles and the potential effects and threats of PCB exposure in cetaceans. [ABSTRACT FROM AUTHOR]
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- 2020
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22. Forensic microbiology reveals that Neisseria animaloris infections in harbour porpoises follow traumatic injuries by grey seals.
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Foster, Geoffrey, Whatmore, Adrian M., Dagleish, Mark P., Malnick, Henry, Gilbert, Maarten J., Begeman, Lineke, Macgregor, Shaheed K., Davison, Nicholas J., Roest, Hendrik Jan, Jepson, Paul, Howie, Fiona, Muchowski, Jakub, Brownlow, Andrew C., Wagenaar, Jaap A., Kik, Marja J. L., Deaville, Rob, Doeschate, Mariel T. I. ten, Barley, Jason, Hunter, Laura, and IJsseldijk, Lonneke L.
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MICROBIAL forensics , *NEISSERIA , *DENTAL caries , *CUSPIDS , *HISTOPATHOLOGY - Abstract
Neisseria animaloris is considered to be a commensal of the canine and feline oral cavities. It is able to cause systemic infections in animals as well as humans, usually after a biting trauma has occurred. We recovered N. animaloris from chronically inflamed bite wounds on pectoral fins and tailstocks, from lungs and other internal organs of eight harbour porpoises. Gross and histopathological evidence suggest that fatal disseminated N. animaloris infections had occurred due to traumatic injury from grey seals. We therefore conclude that these porpoises survived a grey seal predatory attack, with the bite lesions representing the subsequent portal of entry for bacteria to infect the animals causing abscesses in multiple tissues, and eventually death. We demonstrate that forensic microbiology provides a useful tool for linking a perpetrator to its victim. Moreover, N. animaloris should be added to the list of potential zoonotic bacteria following interactions with seals, as the finding of systemic transfer to the lungs and other tissues of the harbour porpoises may suggest a potential to do likewise in humans. [ABSTRACT FROM AUTHOR]
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- 2019
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23. Ecological opportunities and specializations shaped genetic divergence in a highly mobile marine top predator.
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Louis, Marie, Fontaine, Michael C., Spitz, Jérôme, Schlund, Erika, Dabin, Willy, Deaville, Rob, Caurant, Florence, Cherel, Yves, Guinet, Christophe, and Simon-Bouhet, Benoit
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BOTTLENOSE dolphin behavior , *PREDATORY aquatic animals , *MARINE ecology , *MAMMAL evolution , *MAMMAL genetics - Abstract
Environmental conditions can shape genetic and morphological divergence. Release of new habitats during historical environmental changes was a major driver of evolutionary diversification. Here, forces shaping population structure and ecotype differentiation ('pelagic' and 'coastal') of bottlenose dolphins in the North-east Atlantic were investigated using complementary evolutionary and ecological approaches. Inference of population demographic history using approximate Bayesian computation indicated that coastal populations were likely founded by the Atlantic pelagic population after the Last Glacial Maxima probably as a result of newly available coastal ecological niches. Pelagic dolphins from the Atlantic and the Mediterranean Sea likely diverged during a period of high productivity in the Mediterranean Sea. Genetic differentiation between coastal and pelagic ecotypes may be maintained by niche specializations, as indicated by stable isotope and stomach content analyses, and social behaviour. The two ecotypes were only weakly morphologically segregated in contrast to other parts of the World Ocean. This may be linked to weak contrasts between coastal and pelagic habitats and/or a relatively recent divergence. We suggest that ecological opportunity to specialize is a major driver of genetic and morphological divergence. Combining genetic, ecological and morphological approaches is essential to understanding the population structure of mobile and cryptic species. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
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