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Behavioral biology is one of the crucial and trending topics these days which needs proper attention by scholars for rapid development in this field. Therefore, the purpose of this paper is to ease the process of collecting all kinds of relevant and vital data available on the internet regarding this topic in different forms of media, such as news articles, research papers, and YouTube lecture videos, all into one place into a single document in a proper summarized form. For proper training of the LSTM model, the lengthy video and journal datasets are pre-processed using the T5 transformer model to generate a uniform training dataset. So, in this work, a comprehensive approach is proposed based on an abstractive form of text summarization using the seq2seq encoder-decoder model combined with a stacked LSTM layer with an attention mechanism and a T5 transformer model pre-processor. Therefore, a proper hybrid model, T5LSTM-RNN, is implemented to generate the summarized data. [ABSTRACT FROM AUTHOR]

Commentary to "The gene: An appraisal" by Keith Baverstock. PBMB, Volume 164, September 2021, Pages 46–62. this short and informal commentary constructively criticizes the very interesting approach in the paper by a brief survey of the work that a few of us develop since several years. I will first recall the very pertinent critique of the Modern Synthesis and the genocentric approach presented in the paper, then suggest a methodological (and theoretical) critique of the approach by K. Baverstock and hint to alternatives paths that are compatible, but "extend" the physics for biology presented by the author. The purposes and the space allowed force a limited number of references and technical details. These may be found in the references contained in the few papers quoted below that are not the most nor the only representative contributions to the that work, but are inserted as a source of references or as synthetic presentations of our views. [ABSTRACT FROM AUTHOR]

[Display omitted] • Based on the constructed confocal micro-Raman spectroscopy detection system, the visual detection of microplastics in fish was realized, which achieved the integration of spectra and improved the detection efficiency. • The microplastic fluorescence labeling technology was used to eliminate the interference of impurities and achieve rapid pre-screening of microplastics. • Differential Raman spectroscopy was used to solve the problem of fluorescence signal interference in Raman spectroscopy. • Based on the ELM identification model, an easy-to-operate microplastic identification software was written to assist in the rapid characterization of microplastics. • A set of rapid detection methods for microplastics in organisms, including confocal Raman spectroscopy, fluorescence imaging, differential Raman spectroscopy, and rapid identification of microplastics based on ELM modeling assistance, was established. Aiming at the problems of low extraction efficiency, high false detection rate, weak Raman signal and serious interference by fluorescence signal in the detection of microplastics in marine organisms, this paper establishes a set of rapid detection methods for microplastics in organisms, including confocal Raman spectroscopy, fluorescence imaging, differential Raman spectroscopy, and rapid identification of microplastics based on the ELM modeling assistance. Firstly, to address the problem of low extraction efficiency of microplastics, we explored and optimized the digestion method of tissues, which effectively improved the digestion effect of fish tissues and excluded the influence of tissues on microplastics detection. Aiming at the problems of high misdetection rate and low pre-screening efficiency of microplastics, fluorescence imaging technology is adopted to realize the visualization and detection of microplastics, which effectively improves the detection efficiency and precision of microplastics. Based on the confocal microscopy Raman spectroscopy detection system built independently in the laboratory, using 784/785 nm as the excitation light, the differential Raman spectroscopy technique effectively excludes the interference of fluorescence signals in the Raman spectra, and improves the signal-to-noise ratio of the Raman spectra, and the recovery rate of the Raman characteristic peaks in the differential Raman spectroscopy reaches 100 % compared to the traditional baseline correction method, which is 33.3 % higher than that of the baseline correction method. Finally, a microplastic identification model is constructed based on ELM to assist in realizing the rapid and accurate identification of microplastics. The more complete detection method of microplastics in marine organisms proposed in this paper can realize the rapid and nondestructive, efficient and accurate detection of microplastics in fish, which can help to further promote the development of marine microplastics monitoring technology. [ABSTRACT FROM AUTHOR]

Despite overwhelming evidence to the contrary, the concept of 'race' as a biological unit continues to persist in various scientific disciplines, notably in the field of medicine. This paper explores the persistence of 'race as biology' in medical research via examining select citational practices that have perpetuated this problematic concept. Citations serve as a cornerstone in scientific literature, signifying reliability and expert affirmation. By analyzing citation threads and historical patterns, we aim to shed light on the creation and perpetuation of false scientific truths and their impact on medical research, training, and practice. We focus on two prominent examples, eGFR and Spirometry, and trace key articles' citational histories, highlighting the flawed evidence in support of racial corrections in medical assessments. The eGFR equation incorporates 'race' as a factor based on the erroneous belief that Black individuals have higher muscle mass than white individuals. Our analysis reveals that key cited sources for this belief lack robust and well-developed datasets. Similarly, Spirometry measurements incorporate racial correction factors, relying on questionable evidence dating back to the Civil War era. Citations serve as a cornerstone in scientific literature, signifying reliability and expert affirmation. They play a crucial role in shaping theoretical positions and validating data and assumed knowledge. Evaluating citation threads and key articles consistently referenced over time can reveal how falsehoods and erroneous assertions are constructed and maintained in scientific fields. This study underscores the need for critical examination of citational practices in medical research and urges a shift toward a more cautious approach when citing sources that support 'race as biology.' The paper calls for a reevaluation of pedagogical approaches and assigned readings in medical education to prioritize an anti-racist perspective in future research endeavors. • Algorithms in contemporary medicine often involve "race" as a biological variable. • We offer a review of the citation threads in eGFR and Spirometry algorithms. • Support for race as variable relies on faulty, weak, and unsupportive citations. • Medical training must attend to and use caution around "truths" about racialized bodies. [ABSTRACT FROM AUTHOR]

Design, development, productization, and applications of advanced product concepts are pressing for higher multifunctionality, resilience, and maximization of available resources equitably to meet the growing and continuing demands of global customers. These demands have further accelerated during the recent COVID-19 pandemic and are continuing to be a challenge. Engineering designs are one of the most effective ways to endow products with functions, resilience, and sustainability. Biology, through millions of years of evolution, has met these acute requirements under severe resource and environmental constraints. As the manufacturing of products is reaching the fundamental limits of raw materials, labor, and resource constraints in terms of availability, accessibility, and affordability, new approaches are a call to action to meet these challenges. Understanding the designs in biology is an attractive, novel, and desired frontier for learning and implementation to meet this call to action. This is the focus of the paper discussed through examples for convergence of fundamental engineering design concepts and the lessons learned and applied from biology. [ABSTRACT FROM AUTHOR]

The field of osteoarthritis (OA) biology is rapidly evolving and brilliant progress has been made this year as well. Landmark studies of OA biology published in 2021 and early 2022 were selected through PubMed search by personal opinion. These papers were classified by their molecular mechanisms, and it was largely divided into the intracellular signaling mechanisms and the inter-compartment interaction in chondrocyte homeostasis and OA progression. The intracellular signaling mechanisms involving OA progression included (1) Piezo1/transient receptor potential channels of the vanilloid subtype (TRPV) 4-mediated calcium signaling, (2) mechanical load-F-box and WD repeat domain containing 7 (FBXW7) in chondrocyte senescence, (3) mechanical loading-primary cilia-hedgehog signaling, (4) low grade inflammation by toll-like receptor (TLR)-CD14-lipopolysaccharide-binding protein (LBP) complex and inhibitor of NF-κB kinase (IKK) β-nuclear factor kappa B (NF-κB) signaling, (5) selenium pathway and reactive oxygen species (ROS) production, (6) G protein-coupled receptor (GPCR) and cyclic adenosine monophosphate (cAMP) signaling, (7) peroxisome proliferator-activated receptor α (PPARα)-acyl-CoA thioesterase 12 (ACOT12)-mediated de novo lipogenesis and (8) hypoxia-disruptor of telomeric silencing 1-like (DOT1L)-H3-lysine 79 (H3K79) methylation pathway. The studies on inter-compartment or intercellular interaction in OA progression included the following subjects; (1) the anabolic role of lubricin, glycoprotein from superficial zone cells, (2) osteoclast-chondrocyte interaction via exosomal miRNA and sphingosine 1-phosphate (S1P), (3) senescent fibroblast-like synoviocyte and chondrocyte interaction, (4) synovial macrophage and chondrocyte interaction through Flightless I, (5) αV integrin-mediated transforming growth factor beta (TGFβ) activation by mechanical loading, and (6) osteocytic TGFβ in subchondral bone thickening. Despite the disastrous Covid-19 pandemic, many outstanding studies have expanded the boundary of OA biology. They provide both critical insight into the pathophysiology as well as clues for the treatment of OA. [ABSTRACT FROM AUTHOR]

Pandan (Pandanus amaryllifolius Roxb.), a member of the Pandanaceae family, has been consumed as food and medicine since ancient times. The current paper provides an overview of the botanical profile, phytochemistry, pharmacology, and applications of P. amaryllifolius. Information regarding P. amaryllifolius was collected from online sources (using PubMed, Science Direct, Google Scholar, Web of Science, ACS, and CNKI) as well as traditional textbooks. Over 100 compounds have been identified, including its characteristic components 2-Acetyl-1-pyrroline and Pandanus alkaloids. Several therapeutic uses of P. amaryllifolius , such as antioxidant, hypoglycemic, antimicrobial, and antitumor activities, have been demonstrated in modern pharmacological studies. Additionally, it could be applied in various fields, including food, energy, material, and the environment. Continued research on P. amaryllifolius can contribute to the development of new drugs and therapies for various diseases. And further studies are needed to improve its utilization. [Display omitted] [ABSTRACT FROM AUTHOR]

Ervin Bauer (1890–1938) outlined the paradigm of theoretical biology from the perspective of biophysics and bioenergetics. His molecular-based biological theory is centered on the principle of sustainable non-equilibrium, which is continuously produced and maintained by all biological systems throughout their life. Ervin Bauer became the victim of Stalin's Great Terror. Here we present two of the fundamental works of Ervin Bauer in English translation: the paper "The definition of living beings on the basis of their thermodynamic properties, and the fundamental biological principles that follow from it" published in Naturwissenschaften (1920) and the excerpts from his magnum opus "Theoretical Biology" (1935). These works became a bibliographical rarity. A complete English translation of "Theoretical Biology" is an important task for the future. [ABSTRACT FROM AUTHOR]

This paper provides an accessible review of the biological and psychological evidence to guide new and experienced researchers in the study of emotional piloerection in humans. A limited number of studies have attempted to examine the physiological and emotional correlates of piloerection in humans. However, no review has attempted to collate this evidence to guide the field as it moves forward. We first discuss the mechanisms and function of non-emotional and emotional piloerection in humans and animals. We discuss the biological foundations of piloerection as a means to understand the similarities and differences between emotional and non-emotional piloerection. We then present a systematic qualitative review (k = 24) in which we examine the physiological correlates of emotional piloerection. The analysis revealed that indices of sympathetic activation are abundant, suggesting emotional piloerection occurs with increased (phasic) skin conductance and heart rate. Measures of parasympathetic activation are lacking and no definite conclusions can be drawn. Additionally, several studies examined self-reported emotional correlates, and these correlates are discussed in light of several possible theoretical explanations for emotional piloerection. Finally, we provide an overview of the methodological possibilities available for the study of piloerection and we highlight some pressing questions researchers may wish to answer in future studies. • Provides an overview of biological and psychological research on piloerection • Summarises the main physiological correlates of emotional piloerection • Summarises emotional correlates of emotional piloerection • Provides an overview of methodological possibilities for studying emotional piloerection • Identifies questions for future research to answer [ABSTRACT FROM AUTHOR]

This paper distinguishes two ways in which Kant's ideas concerning the relation between teleology and biological organization have been taken up in contemporary philosophy of biology and theoretical biology. The first sees his account as the first instance of the modern understanding of teleology as a heuristic tool aimed at producing mechanistic explanations of organismal form and function. The second sees in Kant's concept of intrinsic purposiveness the seed of a radically new way of thinking about biological systems that should be developed by turning teleology into a legitimate concept of natural science. We name the two approaches heuristic and naturalistic , respectively. Our aim is to critically evaluate these approaches and suggest that the naturalistic option, which remains a minority position, deserves to be taken more seriously than it currently is in contemporary biological theory. While evolution by natural selection closes the case on intelligent design, it does not close the case on teleology in general. In fact, the current return of the organism and the recent calls for an agential perspective in evolutionary biology point out that we still have some thinking to do concerning this side of Kant's legacy. • We address the legacy of Kant's account of teleology for philosophy of biology. • We argue that this legacy implies two contrasting approaches: heuristic and naturalistic. • We critically evaluate these two approaches. • We argue for the plausibility of a non-reductionist, yet naturalistic account of teleology. [ABSTRACT FROM AUTHOR]

Ervin Bauer (1890–1938) was the first to build a general molecular-based biological theory. He defined the basic principles of theoretical biology from a thermodynamic perspective, focusing on the capacity of biological systems to produce and support the state of sustainable non-equilibrium. His central work "Theoretical Biology" (1935) was written long before modern advances in molecular biology, genetics, and information theory. Ervin Bauer and his wife Stefánia were executed in Stalin's Great Terror. This paper presents a brief introduction to Ervin Bauer's life and includes his short biography. [ABSTRACT FROM AUTHOR]

Ervin Bauer was the only biologist who recognized that the best way to develop theoretical biology on an equal footing with theoretical physics was to follow the method that has ensured the great successes of modern theoretical physics: the general method of science. Following this method, he succeeded to find the universal principle of biology. From this principle he managed to derive all the basic equations of biology, that of metabolism, reproduction, growth, responsiveness and successfully explained all the fundamental phenomena of life. In this paper, I introduce Bauer's theoretical biology and discuss whether he understood it within the framework of the modern physical worldview, or in a broader framework. I point out that the theoretical biology of Ervin Bauer is the first to go beyond the physical worldview, to establish a deeper, biological worldview, and thus to represent a major advance in our understanding of the nature of life, with a significance even greater than that of the Copernican turn. Clarifying the difference between the living and the non-living, it is important to consider the difference between machines and living organisms. It is well known that machines are the manifestations of a dual control; globally, their behavior is controlled by their given structure, while locally, their behavior is governed by the physical laws. Based on Bauer's theoretical biology, it is pointed out that living organisms manifest a three-level causality; the 'additional', biological level corresponds to the autonomous, time-dependent control of their structures. [ABSTRACT FROM AUTHOR]

Despite being widely used in both biology and psychology as if it were a single notion, heritability is not a unified concept. This is also true in evolutionary theory, in which the word 'heritability' has at least two technical definitions that only partly overlap. These yield two approaches to heritability: the 'variance approach' and the 'regression approach.' In this paper, I aim to unify these two approaches. After presenting them, I argue that a general notion of heritability ought to satisfy two desiderata—'general applicability' and 'separability of the causes of resemblance.' I argue that neither the variance nor the regression approach satisfies these two desiderata concomitantly. From there, I develop a general definition of heritability that relies on the distinction between intrinsic and extrinsic properties. I show that this general definition satisfies the two desiderata. I then illustrate the potential usefulness of this general definition in the context of microbiome research. • Heritability is a polysemic notion related to both genetic causation and transmission. • I review the main technical definitions of heritability. • I show than none of these definitions has a general applicability. • I propose a notion of heritability with general applicability. • I discuss its potential relevance in a debate surrounding microbiome research. [ABSTRACT FROM AUTHOR]

Certain aspects of experimental tumor models in mice most accurately reflect the biology and immunology of cancer in patients. A survey of experimental cancer immunotherapy papers published in 2020 shows most do not achieve cancer shrinkage although treatment is initiated at an early time point after cancer cell injection, which does not reflect cancer immunotherapy in patients. Even then, few current experimental approaches eradicate the injected malignant cells, most only delay outgrowth. The value of targeting mutation-encoded tumor-specific antigens becomes increasingly evident while problems of finding normal gene-encoded tumor-associated antigens as safe, effective targets persist. It might be time to refocus on realistic experimental settings and truly cancer-specific targets. These antigens are associated with the least risk of side effects. [ABSTRACT FROM AUTHOR]

In this work, a novel lysosome-targeted Cys fluorescent probe, LN-NCS , was synthesized by introducing an isothiocyanate (ITC) moiety as a recognition site for Cys in the naphthalimide fluorophore and combining it with a morpholine moiety for targeting the lysosome. The probe LN-NCS has a large Stokes shift (140 nm), low cytotoxicity, low detection limit (16.3 nM), and high selectivity, and probe LN-NCS reacts with Cys to produce the compound LN-NH 2 with good fluorescence quantum yield (Ф = 0.81). Probe LN-NCS can be used to detect Cys in cells, zebrafish, plant roots, food samples, and environmental water samples. In addition, by mimicking cellular inflammation, the probe LN-NCS was shown to detect changes in Cys concentration induced by cellular inflammation, providing a potential tool to better study the cellular inflammatory environment. [Display omitted] • LN-NCS is a novel Cys probe with the function of targeting lysosomes. • LN-NCS is capable of detecting Cys in food samples and water samples. • LN-NCS allows detection of Cys in cells, zebrafish and Arabidopsis. • LN-NCS was able to detect inflammation-induced changes in Cys concentration. Cysteine (Cys) is a sulfur-containing amino acid that plays an important role in living systems. The most common way to supplement the body with exogenous Cys is through the consumption of Cys-rich foods. Therefore, it is important to detect and analyze Cys in living systems and food samples. However, most of the Cys fluorescent probes developed so far are limited to the detection of the cellular environment only, and very few probes can take into account the detection of Cys in plant roots and food samples. In this paper, a novel fluorescent probe LN-NCS targeting the detection of Cys in lysosomes was designed and synthesized by modifying the naphthalimide fluorophore. The probe LN-NCS has a large Stokes shift (140 nm), low cytotoxicity, low detection limit (16.3 nM), and high selectivity, and probe LN-NCS reacts with Cys to produce the compound LN-NH 2 with good fluorescence quantum yield (Ф = 0.81). Probe LN-NCS can be used to detect Cys in cells, zebrafish, plant roots, food samples, and environmental water samples. In addition, by modeling cellular inflammation, we have demonstrated that probe LN-NCS can detect changes in Cys concentration induced by cellular inflammation, providing a potential tool to better study the cellular inflammatory environment. [ABSTRACT FROM AUTHOR]

A range of studies published in the last few decades promotes the cognitive aspects of life: all organisms, from bacteria to mammals, are capable of sensing/perception, decision-making, problem-solving, learning, and other cognitive functions, including sentience and consciousness. In this paper I present a scientific and philosophical synthesis of these studies, leading to an integrated view of cognitive biology. This view is expressed through the four principles applicable to all living systems: (1) sentience and consciousness, (2) autopoiesis, (3) free energy principle and relational biology, and (4) cognitive repertoire. The principles are circular, and they reinforce themselves. The circularity is not rigid, meaning that hierarchical and heterarchical shifts are widespread in the biosphere. The above principles emerged at the dawn of life, with the first cells, bacteria and archaea. All biogenic forms and functions that emerged since then can be traced to the first cells – indivisible units of biological agency. Following these principles, I developed the concept of biocivilisations to explain various forms of social intelligence in different kingdoms of life. The term biociviloisations draws on the human interpretation of the concept of civilisation, which searches for non-human equivalents of communication, engineering, science, medicine, art, and agriculture, in all kingdoms of life by applying the principles of cognitive biology. Potential avenues for testing the concept of biocivilisations are highlighted. [ABSTRACT FROM AUTHOR]

This paper lays the foundations for an investigation of aesthetics in the light of the theories proposed in the field of Code Biology. Starting from the research objectives that aesthetics has set since its origins, a comparison is made with those aesthetic theories that have been most concerned with the sensory approach to the environment, with the attempt to unite human sciences and the main biological discoveries. Thanks to the scientifically grounded insights offered by Code Biology, we will first outline the field of interest of aesthetics and its foundations, and then delineate certain boundaries – such as those between sensations and perceptions, the aesthetic process and the work of art – that characterise such a field of research. Particular attention will be paid to locating the aesthetic process within the more general cognitive processes, i.e. the three cognitive macrosystems that enable the modelling of the world. [ABSTRACT FROM AUTHOR]

In the philosophy of science, we can consider debates about the nature of non-causal explanations in general (e.g. Reutlinger, Saatsi 2018; Lange 2017) and then especially those in the life sciences (e.g. Huneman, 2018; Kostić 2020). These debates are accompanied by the development of a new mechanism that is becoming the major response to the nature of scientific explanation in the life sciences (e.g. Craver, Darden 2013; Craver 2006); and also by the development of a design explanation (e.g. Eck, Mennes 2016) that represents a modern variant of a functional explanation. In this paper, we will methodically: 1. evaluate the plurality of explanatory strategies in contemporary science (chapter 2). 2. describe the mechanical philosophy and mechanistic explanation (Glennan 2016; Craver, Darden 2013, etc.) (chapter 3). 3. explicate the role of mechanisms in code biology (Barbieri 2015, 2002, etc.) and its relation to the new mechanism (chapter 4). 4. fulfill the main goal of the paper – to apply mechanistic explanations in code biology (Barbieri 2019, etc.) and to apply their suitability for this scientific domain (chapter 5). [ABSTRACT FROM AUTHOR]

Prunus africana (Hook.f.) Kalkman (Rosaceae), commonly known as "Pygeum" or "African cherry", occurs in mainland montane forests scattered across sub-Saharan Africa, Madagascar, and some surrounding islands. Traditionally, decoctions of the stem-bark are taken orally for the treatment of a wide variety of conditions, such as benign prostatic hyperplasia (BPH), stomach ache, chest pain, malaria, heart conditions, and gonorrhoea, as well as urinary and kidney diseases. The timber is used to make axe handles and for other household needs. The dense wood is also sawn for timber. The fragmented information available on the ethnobotany, phytochemistry, and biological activities of the medicinally important P. africana was collated, organised, and analysed in this review, to highlight knowledge voids that can be addressed through future research. A bibliometric analysis of research output on P. africana was conducted on literature retrieved, using the Scopus® database. The trend in the publications over time was assessed and a network analysis of collaborations between countries and authors was carried out. Furthermore, a detailed review of the literature over the period 1971 to 2021, acquired through Scopus, ScienceDirect, SciFinder, Pubmed, Scirp, DOAJ and Google Scholar, was conducted. All relevant abstracts, full-text articles and various book chapters on the botanical and ethnopharmacological aspects of P. africana , written in English and German, were consulted. A total of 455 documents published from 1971 to 2021, were retrieved using the Scopus search. Analysis of the data showed that the majority of these documents were original research articles, followed by reviews and lastly a miscellaneous group comprising conference papers, book chapters, short surveys, editorials and letters. Data were analysed for annual output and areas of intense research focus, and countries with high research output, productive institutions and authors, and collaborative networks were identified. Prunus africana is reported to exhibit anti-inflammatory, analgesic, antimicrobial, anti-oxidant, antiviral, antimutagenic, anti-asthmatic, anti-androgenic, antiproliferative and apoptotic activities amongst others. Phytosterols and other secondary metabolites such as phenols, triterpenes, fatty acids, and linear alcohols have been the focus of phytochemical investigations. The biological activity has largely been ascribed to the phytosterols (mainly 3- β -sitosterol, 3- β -sitostenone, and 3- β -sitosterol-glucoside), which inhibit the production of prostaglandins in the prostate, thereby suppressing the inflammatory symptoms associated with BPH and chronic prostatitis. Many of the ethnobotanical assertions for the biological activity of P. africana have been confirmed through in vitro and in vivo studies. However, a disparity exists between the biological activity of the whole extract and that of single compounds isolated from the extract, which were reported to be less effective. This finding suggests that a different approach to biological activity studies should be encouraged that takes all secondary metabolites present into consideration. A robust technique, such as multivariate biochemometric data analysis, which allows for a holistic intervention to study the biological activity of a species is suggested. Furthermore, there is a need to develop rapid and efficient quality control methods for both raw materials and products to replace the time-consuming and laborious methods currently in use. [Display omitted] • Prunus africana is distributed in Sub-Saharan Africa and some offshore islands. • Traditionally, the stem-bark is commonly used to treat benign prostatic hyperplasia. • Prunus africana is composed of phytosterols, phenols, triterpenes, and fatty acids. • Prunus africana has anti-inflammatory, antimicrobial, and antiviral activities. [ABSTRACT FROM AUTHOR]

This paper presents an alternative to Autopoietic Enactivism in the form of a Code Biology-informed account on human sense-making. It demonstrates the possibility of avoiding a dualism between, on the one hand, the autonomy of individual sense-makers and, on the other, the heteronomy of social facts. This is possible because code biological principles are pertinent to different levels of biological and non-biological organization and cut across the organismic self—non-self border. Analytically, one can maintain the overall integrity of an agent as a separable unit of (inter)action while also avoiding an autonomy-heteronomy divide. We therefore emphasise the constitutive role of codified relations that, while irreducible to operational closure, connect the sense-making agent's social interactions to those of other agents. The move grants a central, constitutive role to external norms (or, heteronomy) as altering the internal, embodied integrity of an autonomous agent. Drawing on the case of prosthetics use in amputees, we show that successful integration of a prothesis cannot be reduced to the substitution of a missing limb. Rather, it demands experienced bodily wholeness on the part of the agent which can only be achieved by attuning and adapting to use of a prosthesis while also internalizing social norms and values. It is concluded that many aspects of the living actualize codified relations which incorporate both heteronomous and autonomous traits. [ABSTRACT FROM AUTHOR]

Prior to its identification as the vector of Lyme borreliosis spirochaetes in Europe in 1983, interest in Ixodes ricinus (L.) was moderate and mainly concerned the transmission of pathogens to farm animals and of tick-borne encephalitis virus to humans. The situation now is very different, and more papers have been published on I. ricinus than on any other ixodid tick species. However, this large literature is scattered and in recent years has become dominated by the molecular detection and characterization of the many pathogens that I. ricinus transmits. Several decades have now elapsed since a review addressing its basic biology and ecology appeared, and the present publication seeks to present basic aspects of its biology and ecology that are related to its role as a vector of disease agents, including its life cycle, feeding behaviour, host relations, survival off the host, and the impact of weather and climate. [ABSTRACT FROM AUTHOR]

• First report on self-incompatibility and pollen nuclei in Linnaeoideae. • Successful in vitro pollen germination protocol for Abelia and Diabelia. • Abelia, Abelia xgrandiflora and Vesalea presented gametophytic self-incompatibility. • Trinuclear pollen was observed in Abelia and Diabelia. Despite being in cultivation for more than 135 years, relatively few cultivars of Abelia have been developed and are commercially available. Cultivar development has been limited by self-incompatibility and crossing barriers with other species. To help overcome these barriers, self-incompatibility systems were investigated in Abelia chinensis R. Brown, Abelia macrotera var. engleriana (Graebner & Buchwald) Rehder, Abelia x grandiflora (Rovelli ex André) Rehder, and Vesalea floribunda M.Martens & Galeotti. A full diallel cross with self-pollinations was performed in greenhouse-grown plants on recently opened flowers. Styles were removed one and two days after pollination, fixed in a solution of ethanol and glacial acetic acid (3:1) for at least 24 hr, transferred to a solution of 4 N NaOH for 24 hrs to soften the tissues, and then stained with 0.1% decolorized aniline blue with 0.1 M K 3 PO 4. Stained styles were analyzed for pollen tube growth under an inverted epifluorescent microscope. Pollen tubes were inhibited in the upper half of the style on self-pollinations and reached the base of the style on cross-pollinations suggesting the presence of gametophytic self-incompatibility in Abelia and Vesalea. In vitro pollen germination was evaluated in A. chinensis, A. macrotera var. engleriana and Diabelia serrata (Siebold & Zuccarini) Landrein. The most effective germination medium consisted of 10% sucrose, 0.01% H 3 BO 3 , 0.02% CaCl 3 and 0.5% agar with a pH of 7. Pollen did not germinate in liquid medium and sucrose concentrations of 15, 20 or 25% were not effective. Three samples of pollen from different dehiscent anthers of recently opened flowers from greenhouse-grown plants were placed on top of a slide containing germination medium. Slides were placed on a petri dish with a wet paper towel to ensure 100% humidity and cultured in light at 28.5 ± 0.5 °C. Germination of 100 pollen grains was evaluated at 2 hrs and 24 hrs after culture. Overall, Abelia macrotera var. engleriana had the highest germination, with 80% of the grains germinating after 24 hrs of culture. Diabelia serrata had 49.8% germination, while A. chinensis exhibited very low germination in the three different pH levels tested. In vitro germinated pollen grains of A. chinensis, A. macrotera var. engleriana , and Diabelia serrata were examined for number of nuclei. Pollen was stained for one hour with 0.25 mg∙L−1 or 0.5mg∙L−1 of a 4′, 6-diamidino-2-phenylindole (DAPI) solution and evaluated under a fluorescent microscope. Observations indicate the presence of three nuclei in pollen in Abelia and Diabelia. This is the first report of a self-incompatibility system in Abelia and Vesalea, and pollen nuclei in Abelia and Diabelia. [Display omitted] [ABSTRACT FROM AUTHOR]

The clinical benefit of LDL cholesterol (LDL-C) lowering for cardiovascular disease prevention is well documented. This paper from the Italian Study Group on Atherosclerosis, Thrombosis and Vascular Biology summarizes current recommendations for treatment of hypercholesterolemia, barriers to lipid-lowering therapy implementation and tips to overcome them, as well as available evidence on the efficacy and safety of bempedoic acid. We also report an updated therapeutic algorithm for pharmacological LDL-C lowering in view of the introduction of bempedoic acid in clinical practice. [Display omitted] [ABSTRACT FROM AUTHOR]

Pyrolae herba is the dried whole plant of Pyrola calliantha H. Andres or Pyrola decorata H. Andres (Pyrolaceae). Pyrolae herba has a long history of medicinal use in China. In ancient times, it was often used to treat pain in tendons and bones, swollen sore, cough, expectoration, bleeding, and other diseases. and was commonly used in ancient times to treat pain in the tendons and bones, swollen sore, cough, expectoration, bleeding and other diseases. This paper summarizes the botany, traditional uses, phytochemistry, pharmacology, quality control and toxicology of Pyrolae herba , with a view to providing reference for further development and research. The relevant information on Pyrolae herba was collected from the scientific databases including PubMed, CNKI, ScienceDirect, Wiley, Springer, Web of Science, Google Scholar, Baidu Scholar, Pharmacopoeia of the People's Republic of China and Flora Republicae Popularis Sinicae, etc. At present, more than 70 compounds have been identified from Pyrolae herba , including flavonoids, phenolic glycosides, quinones, terpenoids, volatile oils and other compounds. Pharmacological studies have shown that Pyrolae herba has a variety of pharmacological activities, such as anti-inflammatory, anti-bacterial, anti-viral, anti-tumor, anti-oxidation, reducing blood lipids, protective on cardiovascular and cerebrovascular, promoting osteoblast proliferation, and so on. It is used clinically in modern times to treat rheumatic arthritis, rheumatoid arthritis, bone hyperplasia, sciatica, cervical spondylosis, lumbar spondylosis, acute and chronic bronchitis, mammary gland hyperplasia, tumor, hypertension, coronary heart disease and bleeding diseases. Pyrolae herba is rich in chemical constituents, diverse in pharmacological activities and abundant in resources, which is widely used in clinics from traditional to modern. However, there is a lack of research on the relationship between chemical constituents and pharmacodynamics of Pyrolae herba. In addition, the existing clinical applications suggest that Pyrolae herba has a certain therapeutic potential in the treatment of hemorrhagic diseases, but there is a lack of information on experimental studies. It is worthwhile to further investigate the Pyrolae herba in depth in the hope of making discoveries and breakthroughs. [Display omitted] • Systematically sorted out the clinical application of Pyrolae herba. • Put forward a promising research direction for Pyrolae herba. • The hemostatic effect of Pyrolae herba has been widely used in clinical medicine in traditional Chinese medicine. [ABSTRACT FROM AUTHOR]

Ilex rotunda Thunb. (I. rotunda) is an Ilex species of Aquifoliaceae, widely distributed in East Asia. Its dried bark is commonly used as a medicinal part in the field of traditional Chinese medicine (TCM), named Ilicis Rotundae Cortex. This medicinal plant is commonly used for clearing heat and removing toxin, draining dampness and relieving pain in TCM to treat tonsillitis, acute gastroenteritis, gastric and duodenal ulcer, rheumatism, traumatic injury, and so on. It also has significant development value on lipid-lowering, hepatoprotection and anti-inflammation, but the potential mechanism needs to be further explored. More and more medicinal substances are being discovered in I. rotunda with multiple biological activities, which help to advance the ethno-pharmacological research in I. rotunda. However, to date there is a lack of a systematic summary of research progress on I. rotunda. This review aims to provide a critical summary of the current studies on I. rotunda. The progress in research on botany, phytochemistry, traditional uses, pharmacology, toxicology, quality control and pharmacokinetics of the plant is discussed. It hopes to provide useful references and guidance for the future directions of research on I. rotunda. Studies of I. rotunda were collected via Google Scholar and Baidu Scholar, PubMed, ScienceDirect, SciFinder, Web of Science, China National Knowledge Infrastructure (CNKI), WANFANG DATA and libraries. Some local books, official websites, PhD or MS's dissertations were also included. The literature cited in this review covered the period from 1956 to January 2022. Analysis of the literature indicates that I. rotunda is a potentially valuable herbal medicine for the therapeutic of various diseases. To date, 120 compounds were found and identified in I. rotunda , mainly including triterpenoids, phenylpropanoids, etc. Modern pharmacological studies also found that the plant has the activities of protecting the cardiovascular system, lowering lipids and protecting the liver, as well as being an anti-inflammatory, anti-tumor and antibacterial. This review summarizes the results from current studies of I. rotunda. However, the current explanation seems insufficient and unsatisfactory, in terms of the relationships between the traditional uses and the modern pharmacological activities, the mechanisms and the material basis. Thus, a critical and comprehensive evaluation is necessary to explore its future research prospects and development direction. [Display omitted] • The highlights of the paper are: • Anti-inflammatory and TCM efficacy are linked in Ilicis Rotundae Cortex (IRC). • Anti-lipid metabolism disorders and TCM efficacy are linked in IRC. • Rotundic acid, pedunculoside and syringin could be key medicinal substances. • This is the first systematic critical review of studies on Ilex rotunda Thunb. [ABSTRACT FROM AUTHOR]

[Display omitted] • VCBM is the Eurographics Workshop on Visual Computing for Biology and Medicine. • We address application-oriented visual computing research. • This is includes visualization, visual analytics, image processing, and HCL. • This section contains extended papers from VCBM 2021 and completely new articles. [ABSTRACT FROM AUTHOR]

Opioids have been used for medicinal purposes as an analgesic and recreational purposes as a euphorigenic throughout human history. Cancer patients are often treated with different doses of opioids concurrently with anti-cancer drugs for pain relief without exhibiting excessive adverse effects. The intersection of the biology of pain, opioid therapy, and disease progression represents the crux of the matters and is of potentially great importance in cancer care. For more than 20 years, multiple investigations have focused on the stimulatory effects of opioids on cancer cell growth, while in-depth studies on the inhibitory effects on cancer cell growth development have usually been neglected. This paper reviews the evidence regarding opioid therapies and their anti-cancer effects on various malignancies. Likewise, we have a glimpse into the molecular mechanisms necessary for pinpointing their positive or negative impacts on malignancies to raise awareness and stimulate more excellent dialogue regarding their carcinogenic/anticarcinogenic roles. [ABSTRACT FROM AUTHOR]

This paper provides insight into the size composition and reproductive aspects of small striped cuttlefish Sepia prabahari distributed exclusively in the Gulf of Mannar (GoM) Biosphere Reserve, in the Indian Ocean which contributes 11% to the cephalopod catch in this region. The size composition in the fishery varied between 4.6 and 14.6 cm in dorsal mantle length (DML) and the length group between 8.1 and 10 cm dominated the catch (45%). The DML-weight relationship for male, female and for the pooled sexes were 0.5561 DML2.31; 0.4821 DML2.39 and 0.5214 DML2.34 respectively. Observations on maturity stages indicated year-round spawning with two peaks. Maturity indices increased in tandem with the gonadal development in the cuttlefish. Mean GSI in females showed a multi-fold increase from 0.41 in maturing to 2.20 in mature stages, while it increased from 0.51 to 1.35 for the respective stages in males. The minimum legal size (MLS) was set considering the minimum size at maturity of 7.0 cm for the species. The Lm 50 estimated at 9.2 cm DML for males; 9.7 cm for females and 9.4 cm for the pooled sexes, showed early maturation in males. The size composition indicated that nearly 53.7% of the commercial catch in the fishery is below the Lm 50 , while 5% of the catch was below MLS. Management measures limiting the fishing pressure on sub-adults are recommended for sustainable exploitation of the resource. • The first report on reproductive biology of S. prabahari from the GoM, Indian Ocean. • Characterization of maturity stages of male and female sex of this species for the first time. • The maturity stages of S. prabahari indicate year-round spawning with two peaks. • Recommended for limiting the fishing pressure on sub-adults for sustainable exploitation. [ABSTRACT FROM AUTHOR]

The Bay of Biscay is a structurally complex region, exhibiting high biodiversity and productivity and hosting a wide variety of benthic habitats. Unfortunately, current scientific knowledge of deep-sea ecosystems is limited. Our investigation provides an updated vision of the existing knowledge on key aspects of the deep-sea ecosystem and identifies research priorities for the definition of a research roadmap in support of sustainable management, including the protection and conservation of deep-sea ecosystem of the Bay of Biscay. To achieve this, firstly a revision of projects, surveys and studies conducted in the region, was carried out resulting in the identification of 62 publicly available scientific documents. Secondly, an online survey was carried out, receiving 51 responses from 24 research institutions in 9 countries. Finally, a workshop was attended by 39 scientists to identify and discuss ways forward on deep-sea research in the Bay of Biscay. Results indicate that knowledge of benthic habitats, and vulnerable and sensitive habitats/species is good or very good for 45% of the respondents, while limited knowledge was reported for deep pelagic habitats. Almost 75% of the scientists agreed that deep-sea processes affect shallower areas. Funding (71%) and research vessel availability (57%) were considered the most constraining aspects limiting deep-sea research. More than 50% of the scientists perceived a short- or medium-term threat from human activities and pressures, while over than 40% of the respondents considered that there are no, or limited, data available to assess the environmental status. Regarding climate change, 55% of scientists partially or fully agreed with the existence of evidence of climate change effects, but 47% of them totally or partially considered that climate change monitoring is insufficient to assess eventual changes and effects. Most respondents (63%) considered that deep-sea ecosystems are not properly represented in the current Marine Protected Areas network. In terms of future needs, the development of monitoring strategies to reduce costs and guarantee an optimal design, data sharing and an increase in transnational collaboration are most cited. Finally, a proposal for a roadmap to fill in knowledge gaps for a better understating of the ecosystem processes of the deep sea of the Bay of Biscay is delivered. • Scientific knowledge of the deep-sea ecosystem in the Bay of Biscay is limited. • An updated vision of current knowledge on key aspects of the deep-sea ecosystem is provided. • Research priorities for the definition of a research roadmap are identified. • Intended to support sustainable management, protection and conservation. [ABSTRACT FROM AUTHOR]

Galla chinensis (GC), a traditional Chinese medicine (TCM), has a wide range of pharmacological properties which have been widely used for more than 1400 years. Based on shape, GC is divided into two groups: jiaobei and dubei. It is a bitter, sour, cold and astringent substance which is usually used for treating diarrhea, constipation, bleeding, cough, vomiting, sweating, hemorrhoids, and anal and uterine prolapse. It is distributed in Japan, North Korea, and all parts of China. This study was aimed at carrying out a comprehensive overview of the current status of research on Galla chinensis (GC) for better understanding of it characteristics, while providing a clear direction for future studies. It has aroused the interest of researchers, leading to development of medicinal value, expansion of its application, and provision of wider and more effective drug choices. This study was focused on the traditional uses, botany, chemical composition, pharmacology and toxicology of GC. Finally, the study focused on possible future research directions for GC. A comprehensive analysis was done based on academic papers, pharmaceutical monographs, ancient medicinal works, and drug standards of China. This review used Galla and Galla chinensis as keywords for retrieval of information on GC from online databases such as PubMed, Elsevier, CNKI, Web of Science, Google Scholar, SCI hub, and Baidu academic. It was found that the chemical constituents of GC included tannins, phenolic acid, amino acids and fatty acid, with polyphenol compounds (especially tannins and gallic acid) as the distinct components. In vitro and in vivo studies revealed that GC exerted numerous biological effects such as anti-caries, antibacterial, antiviral, anticancer, and antioxidant effects. The therapeutic effect of GC was attributed mainly to the biological properties of its bioactive components. GC is an important TCM which has potential benefit in the treatment of a variety of diseases. However, the relationship amongst the structure and biological activity of GC and its components, mechanism of action, toxicity, pharmacokinetics and target organs need to be further studied. Quality control and quality assurance programs for GC need to be further developed. There is need to study the dynamics associated with the accumulation of chemical compounds in GC as well as the original plants and aphid that form GC. [Display omitted] [ABSTRACT FROM AUTHOR]

Khaya grandifoliola is a well-known tree species in Africa with a conservation status of 'vulnerable' due to its overexploitation by the wood industry. Several studies have recorded numerous ethnobotanical uses of this plant, as well as the scientific validation of the efficacy of extracts from different plant parts used for the treatment of various ailments. However, this useful information is scattered throughout the literature and thus there is no opportunity to identify the existing knowledge gaps. This review aims to highlight the medicinal importance of Khaya grandifoliola including its known phytochemistry, biological activities and toxicology, to encourage a refocused conservation strategy since all current efforts are geared towards maintaining its continuous supply to the wood industry. Articles on K. grandifoliola were sourced from online databases such as Google Scholar, Medicine, PubMed, Science Direct, Scopus, SciFinder and other science journal websites up to May 2020. The search was conducted using various combinations of keywords such as biotechnological uses, biological activity, ethnobotany, ethnomedicine, indigenous uses, pharmacological activity, phytochemistry, proximate composition, toxicity, and traditional uses of K. grandifoliola. All downloaded articles were screened to determine their relevance to the scope of the review and the selected papers were included. The review revealed a host of ethnomedicinal uses such as anticancer, antidiabetic, antimicrobial, anti-sickling, anti-ulcerogenic, and hepatoprotective, many of which are supported by scientific data. More importantly, toxicity tests revealed that many of the extracts are safe at various therapeutic doses. Important knowledge gaps that should be explored include phytochemical characterization and validation of some ethnobotanical claims on the folkloric usage of the plant. Notwithstanding the importance of K. grandifoliola in the wood industry, this review reveals that its use as a medicine is equally important. Its medicinal uses are also well supported with scientific studies as well as favourable toxicological studies though some scientific knowledge gaps require further studies. [Display omitted] • A compilation of the many ethnobotanical uses of K. grandifoliola is presented. • Uses include an array of medicinal uses including treatment of malaria. • Several studies have shown scientific validation to support traditional uses. • There are records of numerous chemical constituents isolated from the plant. • Literature revealed the non-toxicity of the extracts at various therapeutic dose. [ABSTRACT FROM AUTHOR]

As a clinical psychologist, I observe stereotyped formulas of behavior in action every day in the consulting room, despite differences in age, race, or culture; they present themselves as codified rules or typical modes of behavior in archetypical situations. Such circumstances coincide with what C.G. Jung defended: the existence of archetypes stored in an inherited/phylogenetic repository, which he called the collective unconscious – somewhat similar to the notion of an ethogram , as shown by ethology. Psychologists can use a perspective to facilitate understanding the phenomenon: the code biology perspective (Barbieri 2014). This approach can help us recognize how these phenomenological events have an ontological reality based not only on the existence of organic information but also on the existence of organic meaning. We are not a tabula rasa (Wilson 2000): despite the explosive diversification of the brain and the emergence of conscience and intentionality, we observe the conservation of basic instincts and emotions (Ekman 2004 ; Damasio 2010) not only in humans but in all mammals and other living beings; we refer to the neural activity on which the discrimination behavior is based, i.e., the neural codes. The conservation of these fundamental set-of-rules or conventions suggests that one or more neural codes have been highly conserved and serves as an interpretive basis for what happens to the living being who owns them (Barbieri 2003). Thus, archetypes' phenomenological reality can be understood not as something metaphorical but as an ontological (phylogenetic) fact (Goodwyn 2019). Furthermore, epigenetic regulation theories present the possibility that the biomolecular process incorporates elements of the context where it takes place; something fundamental to understand our concept – the archetype presents itself as the mnesic remnant of the behavioral history of individuals who preceded us on the evolutionary scale. In short: brains are optimized for processing ethologically relevant sensory signals (Clemens et al., 2015). From the perspective of the corporeal mind (Searle 2002), in this paper, we will show the parallels between code biology and the concept of the archetype, as Jung defended it and as it appears in clinical practice. [ABSTRACT FROM AUTHOR]

We studied the structure of digestive system of deep-sea torquaratorid Quatuoralisia malakhovi including the food-obtaining apparatus, microanatomy of all regions of digestive tract, and fine structure of various regions of the gut. The mouth of Q. malakhovi is surrounded by two symmetrical triangular lateral collar lips and one midventral collar lip, which may retract into the mouth. The ventral ciliary grooves run along the anterior-ventral edges of lateral lips and lead into the internal canals of the lips. The pharyngeal cavity is divided by left and right parabranchial ridges into the median pharyngeal zone with gill bars and two symmetrical peripheral canals, which fuse behind the site of genesis of new gill bars. The gill pharynx is followed by the hepatic region with metameric hepatic sacculations comprising cells with numerous large phagosomes indicating active intracellular digestion. The intestine is filled with undigested food residues including detritus flakes and remnants of various organisms. The intestine content was examined using SEM and histological studies. We analyzed the ratio of organic and mineral components of the bottom sediment from the habitat of Q. malakhovi , and the stable isotope composition of carbon and nitrogen in the intestine content, in the tissues, and in the sediment from the habitat of the studied acorn worm. Using the obtained data and the photographs and videotapes in situ , we have proposed a hypothesis explaining the feeding mechanism of Q. malakhovi. The width of the ventral ciliary groove of the lateral collar lips (100–200 μm) regulates the maximum size of particles that enter the pharynx of the animal. The minimum size of the sediment particles selected by Q. malakhovi is determined by the width of the gill pores and is 1–3 μm. The selected sediment particles move through the peripheral pharyngeal canals to the hepatic region, where the digestion of the food is carried out. In the posthepatic intestine, weight of the gut contents might serve as an anchor that holds the heavily watered jelly-like torquaratorid body at the bottom during the feeding. • Food-obtaining apparatus and digestive system of deep-sea acorn worm Quatuoralisia malakhovi from the Bering Sea. • Stable isotope composition of carbon and nitrogen in gut content, tissues, and sediment from habitat of studied acorn worm. • Hypothesis explaining the feeding mechanism of Quatuoralisia malakhovi. [ABSTRACT FROM AUTHOR]

Although cold-water coral (CWC) biology, physiology, and connectivity, have been extensively studied, few studies have so far focused on their reproductive biology. The reproductive biology of colonies of the reef-building Lophelia pertusa (Linnaeus 1758), now synonymised as Desmophyllum pertusum , and Madrepora oculata (Linnaeus 1758) from the Mediterranean Sea, an area particularly exposed to the effects of anthropogenic pressures, was investigated for the first time using histological techniques. Samples were collected from the Lacaze-Duthiers canyon in the Gulf of Lion, northwestern Mediterranean Sea, where the corals are living at 13 °C, close to their upper limit of thermal tolerance. The gametogenic cycle suggests a seasonal spawning of D. pertusum in autumn to early winter, similarly to population from the Gulf of Mexico. This period corresponds to the formation of storm-induced deep-sea water plumes, likely acting as a time giver for coral spawning and facilitates larval dispersal. Madrepora oculata shows continuous reproduction as already identified in eastern and western North Atlantic, with reproductive features of a species less opportunistic than D. pertusum , consistent with its other biological characteristics. This difference between the two species is of paramount importance to define strategies of conservation. • First data on the reproduction of two cold-water corals in the Mediterranean Sea. • Potential spawning date in autumn and/or early winter for Desmophyllum pertusum. • Role of deep-sea currents in timing of spawning for this species. • Madrepora oculata harbor different strategy, with a continuous reproduction. [ABSTRACT FROM AUTHOR]

Reproduction of the brooding feather star Phrixometra nutrix was studied from the deep southwestern Atlantic Ocean. Samples were collected using dredge trawlers and fishing nets on board the B/O Puerto Deseado, between 91 and 512 m depth. Reproductive biology was studied using modern optical techniques including histology and scanning electron microscopy. Here we present the first record of genital papillae for class Crinoidea. Genital papillae have been reported in all extant echinoderm classes except for Crinoidea. In addition, a high proportion (16%) of hermaphroditic specimens was found in the analyzed samples. Finally, cystidean and pentacrinoid stages were found inside the marsupium of Phrixometra nutrix. It is expected that this work will enable further discoveries of crinoid reproductive biology considering the ecological and phylogenetic importance of brooding crinoids. [ABSTRACT FROM AUTHOR]

Deep-sea habitats are home for a variety of yet poorly known fish species, some of which display specialized life strategies, as is the case of Bythitidae and Zoarcidae. With the purpose of elucidating biological and ecological aspects of representatives of these families in NW Mediterranean waters, a large dataset based on 599 specimens of Cataetyx alleni , 30 C. laticeps and 284 Melanostigma atlanticum captured during the last 30 years within the framework of different research projects was used to address their geographical and bathymetric distribution, population structure, reproduction, trophic ecology, parasitism and enzymatic markers in the Balearic basin. Present outcomes revealed a patchy distribution mostly for M. atlanticum , possibly related to aggregation during reproduction and to the association with specific sediments. For the three species, higher densities occurred in the mainland vs. the insular margin, and a diminishing trend in estimated densities over the last decades was observed for C. alleni and M. atlanticum likely linked to climatic oscillations. Trophic data indicated that the two Cataetyx species inhabit the water-sediment interface and mainly feed on suprabenthic prey, while M. atlanticum inhabits the water column near the bottom preying on pelagic organisms and moving towards the seabed during reproduction. These results were supported by the parasitological assessment, which revealed that parasite communities were moderately diverse and abundant for Cataetyx spp. while being highly depauperate for M. atlanticum. Present outcomes from the Mediterranean Sea confirmed reproduction of C. alleni during autumn-winter and of M. atlanticum during autumn. Spawning of the former species may occur in winter-spring, as suggested by the finding, by the first time, of two females captured in March with fully-developed embryos inside. Levels of enzymatic markers quantified in muscle were provided for C. alleni and M. atlanticum for the first time. The special interactions found between the distribution and biology of Bythitidae and Zoarcidae and the sedimentary bottoms that they inhabit indicates that such conventional habitats are more heterogeneous than it is generally assumed and deserve higher attention for future protection. • Specialized deep-sea Zoarcidae and Bythitidae show particular life histories. • Geographical heterogeneity occurred at various scales for Zoarcidae and Bythitidae. • Deep sedimentary grounds may not be as homogeneous as previously thought. • Diet, parasites and enzymatic activities proved useful indicators of habitat use. [ABSTRACT FROM AUTHOR]