16 results
Search Results
2. Structural diversity and stress regulation of the plant immunity-associated CALMODULIN-BINDING PROTEIN 60 (CBP60) family of transcription factors in Solanum lycopersicum (tomato)
- Author
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Shivnauth, Vanessa, Pretheepkumar, Sonya, Marchetta, Eric J. R., Rossi, Christina A. M., Amani, Keaun, and Castroverde, Christian Danve M.
- Abstract
Cellular signaling generates calcium (Ca2+) ions, which are ubiquitous secondary messengers decoded by calcium-dependent protein kinases, calcineurins, calreticulin, calmodulins (CAMs), and CAM-binding proteins. Previous studies in the model plant Arabidopsis thaliana have shown the critical roles of the CAM-BINDING PROTEIN 60 (CBP60) protein family in plant growth, stress responses, and immunity. Certain CBP60 factors can regulate plant immune responses, like pattern-triggered immunity, effector-triggered immunity, and synthesis of major plant immune-activating metabolites salicylic acid (SA) and N-hydroxypipecolic acid (NHP). Although homologous CBP60 sequences have been identified in the plant kingdom, their function and regulation in most species remain unclear. In this paper, we specifically characterized 11 members of the CBP60 family in the agriculturally important crop tomato (Solanum lycopersicum). Protein sequence analyses revealed that three CBP60 homologs have the closest amino acid identity to Arabidopsis CBP60g and SARD1, master transcription factors involved in plant immunity. Strikingly, AlphaFold deep learning–assisted prediction of protein structures highlighted close structural similarity between these tomato and Arabidopsis CBP60 homologs. Conserved domain analyses revealed that they possess CAM-binding domains and DNA-binding domains, reflecting their potential involvement in linking Ca2+ signaling and transcriptional regulation in tomato plants. In terms of their gene expression profiles under biotic (Pseudomonas syringae pv. tomato DC3000 pathogen infection) and/or abiotic stress (warming temperatures), five tomato CBP60 genes were pathogen-responsive and temperature-sensitive, reminiscent of Arabidopsis CBP60g and SARD1. Overall, we present a genome-wide identification of the CBP60 gene/protein family in tomato plants, and we provide evidence on their regulation and potential function as Ca2+-sensing transcriptional regulators. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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3. Changes in the temperature-mortality relationship in France: Limited evidence of adaptation to a new climate.
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Pascal, Mathilde, Wagner, Vérène, and Corso, Magali
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CLIMATE change & health , *TEMPERATURE distribution , *CLIMATE change , *CONFIDENCE intervals , *PERCENTILES - Abstract
Context: Documenting trends in the health impacts of ambient temperature is key to supporting adaptation strategies to climate change. This paper explores changes in the temperature-related mortality in 18 French urban centers between 1970 and 2015. Method: A multicentric time-series design with time-varying distributed lag nonlinear models was adopted to model the shape of the relationship and assess temporal changes in risks and impacts. Results: The general shape of the temperature-mortality relationship did not change over time, except for an increasing risk at very low percentiles and a decreasing risk at very high percentiles. The relative risk at the 99.9th percentile compared to the 50th percentile of the 1970–2015 temperature distribution decreased from 2.33 [95% confidence interval (CI): 1.95:2.79] in 1975 to 1.33 [95% CI: 1.14:1.55] in 2015. Between 1970 and 2015, 302,456 [95% CI: 292,723:311,392] deaths were attributable to non-optimal temperatures, corresponding to 5.5% [95% CI: 5.3:5.6] of total mortality. This burden decreased progressively, representing 7.2% [95% CI: 6.7:7.7] of total mortality in the 1970s to 3.4% [95% CI: 3.2:3.6] in the 2000s. However, the contribution of hot temperatures to this burden (higher than the 90th percentile) increased. Discussion: Despite the decreasing relative risk, the fraction of mortality attributable to extreme heat increased between 1970 and 2015, thus highlighting the need for proactive adaptation. [ABSTRACT FROM AUTHOR]
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- 2023
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4. Exploring differences in spatial patterns and temporal trends of phenological models at continental scale using gridded temperature time-series.
- Author
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Mehdipoor, Hamed, Zurita-Milla, Raul, Augustijn, Ellen-Wien, and Izquierdo-Verdiguier, Emma
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MODELS & modelmaking , *PLANT phenology , *TRENDS , *TEMPERATURE , *GOODNESS-of-fit tests , *HOT springs , *TIME series analysis , *HISTOGRAMS - Abstract
Phenological models are widely used to estimate the influence of weather and climate on plant development. The goodness of fit of phenological models often is assessed by considering the root-mean-square error (RMSE) between observed and predicted dates. However, the spatial patterns and temporal trends derived from models with similar RMSE may vary considerably. In this paper, we analyse and compare patterns and trends from a suite of temperature-based phenological models, namely extended spring indices, thermal time and photothermal time models. These models were first calibrated using lilac leaf onset observations for the period 1961–1994. Next, volunteered phenological observations and daily gridded temperature data were used to validate the models. After that, the two most accurate models were used to evaluate the patterns and trends of leaf onset for the conterminous US over the period 2000–2014. Our results show that the RMSEs of extended spring indices and thermal time models are similar and about 2 days lower than those produced by the other models. Yet the dates of leaf out produced by each of the models differ by up to 11 days, and the trends differ by up to a week per decade. The results from the histograms and difference maps show that the statistical significance of these trends strongly depends on the type of model applied. Therefore, further work should focus on the development of metrics that can quantify the difference between patterns and trends derived from spatially explicit phenological models. Such metrics could subsequently be used to validate phenological models in both space and time. Also, such metrics could be used to validate phenological models in both space and time. [ABSTRACT FROM AUTHOR]
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- 2020
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5. An Asymmetric Spatiotemporal Connection between the Euro-Atlantic Blocking within the NAO Life Cycle and European Climates.
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Yao, Yao and Luo, Dehai
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NORTH Atlantic oscillation , *SPATIOTEMPORAL processes , *ATMOSPHERIC temperature , *CLIMATE change , *METEOROLOGICAL precipitation - Abstract
This paper examines an asymmetric spatiotemporal connection and climatic impact between the winter atmospheric blocking activity in the Euro-Atlantic sector and the life cycle of the North Atlantic Oscillation (NAO) during the period 1950-2012. Results show that, for positive NAO (NAO+) events, the instantaneous blocking (IB) frequency exhibits an enhancement along the southwest-northeast (SW-NE) direction from the eastern Atlantic to northeastern Europe (SW-NE pattern, hereafter), which is particularly evident during the NAO+ decaying stage. By contrast, for negative NAO (NAO−) events, the IB frequency exhibits a spatially asymmetric southeast-northwest (SE-NW) distribution from central Europe to the North Atlantic and Greenland (SE-NW pattern, hereafter). Moreover, for NAO− (NAO+) events, the most marked decrease (increase) in the surface air temperature (SAT) in winter over northern Europe is in the decaying stage. For NAO+ events, the dominant positive temperature and precipitation anomalies exhibit the SW-NE-oriented distribution from western to northeastern Europe, which is parallel to the NAO+-related blocking frequency distribution. For NAO- events, the dominant negative temperature anomaly is in northern and central Europe, whereas the dominant positive precipitation anomaly is distributed over southern Europe along the SW-NE direction. In addition, the downward infrared radiation controlled by the NAO’s circulation plays a crucial role in the SAT anomaly distribution. It is further shown that the NAO’s phase can act as an asymmetric impact on the European climate through producing this asymmetric spatiotemporal connection with the Euro-Atlantic IB frequency. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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6. Impact of diurnal temperature range on human health: a systematic review.
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Cheng, Jian, Xu, Zhiwei, Zhu, Rui, Wang, Xu, Jin, Liu, Song, Jian, and Su, Hong
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CLIMATE change , *TEMPERATURE , *PUBLIC health , *RESPIRATORY diseases , *CARDIOVASCULAR diseases - Abstract
Increasing epidemiological studies have shown that a rapid temperature change within 1 day is an independent risk factor for human health. This paper aimed to systematically review the epidemiological evidence on the relationship between diurnal temperature range (DTR) and human health and to propose future research directions. A literature search was conducted in October 2013 using the databases including PubMed, ScienceDirect, and EBSCO. Empirical studies regarding the relationship between DTR and mortality and morbidity were included. Twenty-five relevant studies were identified, among which, 11 investigated the relationship between DTR and mortality and 14 examined the impact of DTR on morbidity. The majority of existing studies reported that DTR was significantly associated with mortality and morbidity, particularly for cardiovascular and respiratory diseases. Notably, compared with adults, the elderly and children were more vulnerable to DTR effects. However, there were some inconsistencies regarding the susceptible groups, lag time, and threshold of DTR. The impact of DTR on human health may be confounded or modified by season, socioeconomic, and educational status. Further research is needed to further confirm the adverse effects of DTR in different geographical locations; examine the effects of DTR on the health of children aged one or under; explore extreme DTR effects on human health; analyze the difference of DTR effects on human health in different locations and the modified effects of potential confounding factors; and develop detailed preventive measures against large DTR, particularly for susceptible groups. [ABSTRACT FROM AUTHOR]
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- 2014
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7. Droughts and broad-scale climate variability reflected by temperature-sensitive tree growth in the Qinling Mountains, central China.
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Liu, Na, Liu, Yu, Zhou, Qi, and Bao, Guang
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TEMPERATURE , *DROUGHTS , *LARCHES , *SURFACE chemistry - Abstract
The relationship between temperature and drought was investigated using the temperature-sensitive growth of Larix chinensis Beissn in the Qinling Mountains, central China. Extremely high tree-ring width index values (TRWI) agreed well with dry conditions defined by the dryness-wetness index (DWI) obtained from data in Chinese historical documents and climate-related papers between 1814 and 1956 (before the short of instrumental measurements); the reverse applied to extremely low TRWI values. The main severe drought epochs occurred from the late 1850s to the 1870s, the 1920s to 1930s and in the 2000s, whereas wet spells occurred from 1817-1827 and 1881-1886. The droughts in the 2000s exhibited a similar pattern as the ones from the 1920s to 1930s, with obviously an increasing temperature. The variation of tree growth agreed well with other reconstructed temperature series from nearby and remote regions, suggesting that Larix chinensis could respond to broad-scale climate variability. The longest cold interval, 1817-1827, could be associated with the influence of the Tambora eruption in 1815. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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8. Climate change impact on development rates of the codling moth ( Cydia pomonella L.) in the Wielkopolska region, Poland.
- Author
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Juszczak, Radosław, Kuchar, Leszek, Leśny, Jacek, and Olejnik, Janusz
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CLIMATE change , *ATMOSPHERIC models , *TEMPERATURE , *CODLING moth - Abstract
The main goal of this paper is to estimate how the observed and predicted climate changes may affect the development rates and emergence of the codling moth in the southern part of the Wielkopolska region in Poland. In order to simulate the future climate conditions one of the most frequently used A1B SRES scenarios and two different IPCC climate models (HadCM3 and GISS modelE) are considered. A daily weather generator (WGENK) was used to generate temperature values for present and future climate conditions (time horizons 2020-2040 and 2040-2060). Based on the generated data set, the degree-days values were then calculated and the emergence dates of the codling moth at key stages were estimated basing on the defined thresholds. Our analyses showed that the average air surface temperature in the Wielkopolska region may increase from 2.8°C (according to GISS modelE) even up to 3.3°C (HadCM3) in the period of 2040-2060. With the warming climate conditions the cumulated degree-days values may increase at a rate of about 142 DD per decade when the low temperature threshold ( T) of 0°C is considered and 91 DD per decade when T = 10°C. The key developmental stages of the codling moth may occur much earlier in the future climate conditions than currently, at a rate of about 3.8-6.8 days per decade, depending on the considered GCM model and the pest developmental stage. The fastest changes may be observed in the emergence dates of 95% of larvae of the second codling moth generation. This could increase the emergence probability of the pest third generation that has not currently occurred in Poland. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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9. Observed variability and trends in extreme temperature indices and rice-wheat productivity over two districts of Bihar, India-a case study.
- Author
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Subash, N., Singh, S., and Priya, Neha
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CASE studies , *TEMPERATURE , *SEASONAL temperature variations , *STATISTICAL correlation , *CLIMATE change - Abstract
The purpose of this paper is to analyze the trends and variability in extreme temperature indices and its impact on rice-wheat productivity over two districts of Bihar, India, which is part of the middle Indo-Gangetic Basin. Mann-Kendall non-parametric test was employed for detection of trend and Sen slope was determined to quantify the magnitude of such trends. We have analyzed 10 extreme temperature indices for monthly and seasonally. The influence of extreme temperature indices on rice-wheat productivity was determined using correlation analysis. As far as Patna is concerned, if the number of cool days during September ≥10, the rice productivity will increase due to the availability of sufficient duration to fill up the grain. However, higher warm days during all the months except June will affect the productivity. A significant negative correlation was noticed between maximum value of minimum temperature during September and rice productivity. Highly significant positive correlation was noticed between number of cool days during September with rice productivity while it was highly significant negative correlation in the case of number of warm days during the same month. As far as Samastipur is concerned, a negative correlation was noticed between wheat productivity and maximum value of maximum temperature (TXx) during February, but not statistically significant. The higher temperature may affect the kernel weight and thereby yield. It is seen that a critical value of TXx ≥29.2 °C will be harmful to wheat crop during February. A significant positive correlation of number of cool nights with wheat productivity also supports the above relationship. The critical values of extreme temperature indices during rice and wheat growing months provide an indicator to assess the vulnerability of rice-wheat productivity to temperature for Patna and Samastipur districts and there is a need to prepare an adaptive strategy and also develop thermo-insensitive rice-wheat high yielding varieties suitable for this region to sustain rice-wheat productivity under projected climate change situation. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
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10. Observed climate variability and change in Urmia Lake Basin, Iran.
- Author
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Delju, A., Ceylan, A., Piguet, E., and Rebetez, M.
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LAKES , *CLIMATE change , *TIME series analysis , *TEMPERATURE , *METEOROLOGICAL precipitation - Abstract
This paper analyzes climate variability and change in the Urmia Lake Basin, northwest of Iran. Annual average of the following data time series has been analyzed by statistical methods: dry bulb temperature, maximum and minimum temperature, precipitation, and number of rainy and snowy days. We have also used mean monthly temperature and precipitation data for analysis of drought spells for the period 1964-2005 to find out whether fluctuations in the lake level are attributable to natural drought. Our results indicate that mean precipitation has decreased by 9.2 % and the average maximum temperature has increased by 0.8°C over these four decades. The seasonal changes are particularly visible in winter and spring. Results of the Palmer Drought Severity Index show that on average, drought episodes have hit the Urmia Lake Basin every 5 years and most of them reached severe levels, but recent droughts have become more intense and last longer. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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11. Spatial and temporal variations of C/C relative abundance in global terrestrial ecosystem since the Last Glacial and its possible driving mechanisms.
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Rao, ZhiGuo, Chen, FaHu, Zhang, Xiao, Xu, YuanBin, Xue, Qian, and Zhang, PingYu
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SPATIO-temporal variation , *BIOTIC communities , *GLACIAL Epoch , *CARBON compounds , *ATMOSPHERIC carbon monoxide , *CLIMATE change , *ATMOSPHERIC temperature - Abstract
The primary factor controlling C/C relative abundance in terrestrial ecosystem since the Last Glacial has been widely debated. Now more and more researchers recognize that climate, rather than atmospheric CO concentration, is the dominant factor. However, for a specific area, conflicting viewpoints regarding the more influential one between temperature and precipitation still exist. As temperature and precipitation in a specific area usually not only vary within limited ranges, but also covary with each other, it is difficult to get a clear understanding of the mechanism driving C/C relative abundance. Therefore, systematic analysis on greater spatial scales may promote our understanding of the driving force. In this paper, records of C/C relative abundance since the Last Glacial on a global scale have been reviewed, and we conclude that: except the Mediterranean climate zone, C plants predominated the high latitudes during both the Last Glacial and the Holocene; from the Last Glacial to the Holocene, C relative abundances increased in the middle latitudes, but decreased in the low latitudes. Combining with studies of modern process, we propose a simplified model to explain the variations of C/C relative abundance in global ecosystem since the Last Glacial. On the background of atmospheric CO concentration since the Last Glacial, temperature is the primary factor controlling C/C relative abundance; when temperature is high enough, precipitation then exerts more influence. In detail, in low latitudes, temperature was high enough for the growth of C plants during both the Last Glacial and the Holocene; but increased precipitation in the Holocene inhibited the growth of C plants. In middle latitudes, rising temperature in the Holocene promoted the C expansion. In high latitudes, temperature was too low to favor the growth of C plants and the biomass was predominated by C plants since the Last Glacial. Our review would benefit interpretation of newly gained records of C/C relative abundance from different areas and different periods, and has its significance in the understanding of the driving mechanisms of C/C variations on longer timescales (e.g., since the late Miocene) with reliable records of temperature and atmospheric CO concentration. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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12. Climate change in Europe and effects on thermal resources for crops.
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Mariani, L., Parisi, S., Cola, G., and Failla, O.
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UPPER air temperature , *CLIMATE change , *AGRICULTURAL productivity & the environment - Abstract
Atmospheric variables play a fundamental role in driving man-managed ecosystems and more specifically in agro-ecosystems, determining the quantity and quality of crop production. On the other hand, climate variability can be seen as the superimposition of gradual and abrupt changes. This paper is focused on European surface air temperature in the period 1951-2010. Analysis of this dataset identified breakpoints that define two homogeneous sub-periods: 1951-1987 and 1988-2010. Thermal resources for crops were analyzed adopting a 'normal heat hours' approach. Computation highlighted a general increase in thermal resources in the European continent for crop groups II and III (C3 and C4 plants adapted to high or moderate temperatures), while a decline of thermal resources for crop group I (cold adapted C3) was highlighted in the Mediterranean area. The climate variability justifies a change in the potential latitudinal limits of different groups of crops, representing a fundamental step for crop adaptation to climate change. [ABSTRACT FROM AUTHOR]
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- 2012
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13. Long memory, seasonality and time trends in the average monthly temperatures in Alaska.
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Gil-Alana, Luis
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TEMPERATURE , *METEOROLOGICAL stations , *SEASONS , *CLIMATE change - Abstract
This paper deals with the analysis of monthly temperatures in 19 meteorological stations in Alaska during the last 50 years. For this purpose, we employ a procedure that permits us to examine in a single framework several features observed in climatological time series such as time trends, long-range persistence and seasonality. The results indicate that the highest degrees of persistence are observed in stations located in the southern regions and seasonality appears as a major issue in all cases. Removing the seasonal structure and focussing on the anomalies with respect to the monthly means, the time trend coefficients appear significantly positive in the majority of the cases, implying that temperatures have increased during the last 50 years. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
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14. Analysis of extreme temperatures for four sites across Peninsular Spain.
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Furió, Dolores and Meneu, Vicente
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CLIMATOLOGY , *STATISTICS , *QUANTITATIVE research , *TEMPERATURE , *CLIMATE change - Abstract
Statistical analyses regarding climate studies have often used the average temperature as one of the main variables. However, the tails of the respective distributions are also crucial and have become increasingly considered in recent years. As the Intergovernmental Panel on Climate Change in its fourth assessment report (IPCC ) states, 'the type, frequency and intensity of extreme events are expected to change as Earth's climate changes'. In this paper, the focus is on the statistical behaviour of extreme (maximum and minimum) values of temperature, both in winter and summer. Under the framework of the Extreme Value Theory, the methodology of block maxima is employed. The generalised extreme value distribution, allowing for a linear trend in the location parameter, is fitted to data in order to capture the time tendency in the non-stationary processes. We are able to approximate expected values with a determined probability and to identify time trends of such events. Particularly, an increasing time trend in maximum and minimum temperature is generally detected which could be of great concern to public and private sectors. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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15. The opening of Pandora’s Box: climate change impacts on soil fertility and crop nutrition in developing countries.
- Author
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St.Clair, Samuel B. and Lynch, Jonathan P.
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SOIL fertility , *CROP nutrition , *CLIMATE change , *POPULATION , *DROUGHTS , *FOOD production , *SOIL degradation ,DEVELOPING countries - Abstract
Feeding the world’s growing population is a serious challenge. Food insecurity is concentrated in developing nations, where drought and low soil fertility are primary constraints to food production. Many crops in developing countries are supported by weathered soils in which nutrient deficiencies and ion toxicities are common. Many systems have declining soil fertility due to inadequate use of fertility inputs, ongoing soil degradation, and increasingly intense resource use by burgeoning populations. Climate models predict that warmer temperatures and increases in the frequency and duration of drought during the 21st century will have net negative effects on agricultural productivity. The potential effects of climate change on soil fertility and the ability of crops to acquire and utilize soil nutrients is poorly understood, but is essential for understanding the future of global agriculture. This paper explores how rising temperature, drought and more intense precipitation events projected in climate change scenarios for the 21st century might affect soil fertility and the mineral nutrition of crops in developing countries. The effects of climate change on erosion rates, soil organic carbon losses, soil moisture, root growth and function, root-microbe associations and plant phenology as they relate to mineral nutrition are discussed. Our analysis suggests that the negative impacts of climate change on soil fertility and mineral nutrition of crops will far exceed beneficial effects, which would intensify food insecurity, particularly in developing countries. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
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16. Attribution analyses of potential evapotranspiration changes in China since the 1960s.
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Yunhe Yin, Shaohong Wu, Gang Chen, and Erfu Dai
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CLIMATE change , *METEOROLOGICAL stations , *HUMIDITY , *TEMPERATURE - Abstract
This paper focuses on the primary causes of changes in potential evapotranspiration (ETo) in order to comprehensively understand climate change and its impact on hydrological cycle. Based on modified Penman-Monteith model, ETo is simulated, and its changes are attributed by analyzing the sensitivity of ETo to influence meteorological variables together with their changes for 595 meteorological stations across China during the period 1961–2008. Results show the decreasing trends of ETo in the whole country and in most climate regions except the cold temperate humid region in Northeast China. For China as a whole, the decreasing trend of ETo is primarily attributed to wind speed due to its significant decreasing trend and high sensitivity. Relative humidity is the highest sensitive variable; however, it has negligible effect on ETo for its insignificant trend. The positive contribution of temperature rising to ETo is offset by the effect of wind speed and sunshine duration. In addition, primary causes to ETo changes are varied for differing climate regions. ETo changes are attributed to decreased wind speed in most climate regions mainly distributed in West China and North China, to declined sunshine duration in subtropical and tropical humid regions in South China, and to increased maximum temperature in the cold temperate humid region. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
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